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The map label for this gene is ybeQ [H]

Identifier: 220903462

GI number: 220903462

Start: 222806

End: 224845

Strand: Reverse

Name: ybeQ [H]

Synonym: Ddes_0178

Alternate gene names: 220903462

Gene position: 224845-222806 (Counterclockwise)

Preceding gene: 220903463

Following gene: 220903453

Centisome position: 7.82

GC content: 65.0

Gene sequence:

>2040_bases
ATGCGCCGGGACAAACTCCACGACATAACGGCACCCACAGGCTCTGCAAGGTGCAAAAACAGTCCCCGCAAGGTCACCAT
GCCCGTATTGTGGGGGCTTGCCCCTGATGGATTTCTTTCCGCAGCCCTGCGCACTTTCAAAACCCGTCTTTTTGCCTTGC
GCGCGCGTTGCCTGCATGTCCTGCCCCTGTGCGCCCTGATCCTGTGCGCCCTGCCACCGGGCGCCCCGGGTACGCACCTT
GCCGCCGCATACGTATGGGGACCACGCCCGGCCCTGGCGGCGGCCGCCTCCATCCCCACGCCCACACCTGCCGAGCCTAG
AGTGCATGAACCTGTTGTACCCGTTCCCACGGTCACTGTACCGACAGTTCAGGCTCCGGTGGTTCAGGCTCCGCAGCTCC
AGCCCTCCGGCGGGCAGCAAAGGCCCGGATGGAGCGGATCGAGCGGGCGGAGCGGCAATGCCGGGCAAGCCGCAAGCCTG
CAGGACGCCGGAAATGATGGCCGGCAAGTCTCCCCCACCCGCGAAATTATGGGCTTTCTCTTTGGCGGCAACACAGGCAC
GGCTTCAGATAACGCAACGGCTGCCCCGCAGGACACTGCAAGCCATCCCTCAACGTCCATACGCAACGGCAGCCTGAACA
GCACAGGTCCCAATGGCGCCCCCATGCCTCCAGGCCCGATTGCCGTGCCGCTGCCGGCTCCTGTAGCGCCACCGGCTCCC
GTGGCCCCTGTGGCCCCTGCCCCGGTTCCGGCCACACCCGGCAATCGTGTTCCGGCCCGGGCCGTGGCCGAAATGCAGCC
ACAGTCGCCTGAAGCGCAATTGCGCCAGAAGCAGCAAAATGCAGAAAGGGAACGTCAGCGGCAGGAAAAGGCACGTCGCA
GTTCCCGGCCCGCCAAGGCTACGGAAACTGCCGGTCCGGAGGCCTCCCGCCCGGCGGCAGACCATGCCGGTACGCCGACT
TCCGTACCGCCCCCGGCCGCAAAGGAAGAAAACACGCCCCCGGATGTGCCGGAAACCCCAAAAGCGGAAAGCCCCTTTAC
ACCCGGCAGCCCCGAAGCACAGGCCAATGAGGCCTACCAGAAAGGTGATTTTGCCCAGGCGCGGGCCATCTGGCAGCACC
TTGCGGATGGCGGCGACGGGCAGTCCATGAACAATCTGGGCGTGCTTTATGATCTCGGTCTGGGGGTAGAGCCTGACGAA
GGGCGCGCCCTGCACTGGTTTGCCCAGTCTGCGGCAGCGGGGCATCCCTCAGGCATGAGCAATTACGGCCGCATGCTGGA
ACAGGGACGTGGCATTGAAGCCAACCCCCACGAGGCTGCCCGCTGGTTTGACCTCGCGGCCCGACAGGGCCAGCCCGAAG
CCCAGTACAATCTGGGACTTATGTATGAAAGCGGTCACGGCGTATCCCGCGACTACAAGGCCGCCGCCGCATGGTACAGC
CGCGCAGCAGCCCAGCAGCAAATAGACGCGCTCGCCCGGCTGGGCCATCTCTATCGCGCCGGAGAGGGTGTGGAAAAGAA
TGCGGCACGAGCCACGCTTTTACTCTATGCGGCAGCCATGCGCGGCTCTGTTCATGCCATGAAAGAGCTGGAGGCCATGG
CCGAAGCCTCCGGAGTACGCCACGGAGCCGTGCTTTTCGGGCAACGGCTGGATACGGCCAACCGCACGGCCATGCGCGAC
ACGCTTTCCAGGGCCGGCATGCAGCCGTCCCGGCAGGACGATGCCTATATCTGCGACCTGTATATCCCCGGCGCCCTTGT
ACCCGGCGCACGGCAAATGGCTCTTTGCTACGGCCCGGGCAGGCCCGCGCCTCTGGGCTTTGTAGAACTGGAATATGCCG
CCCCCCACAAGGACACCGCCCAGAGCATCATGCGCATGGTCAGTGAGCGCTTCGGGCCGCCATCCGCCGGAGAAGGGGAC
GACGGACACATCTGGAATCTCGGTACGGTCATCGTGGCCACGCGCTACAACCCCGCGCAACAGACGGTCAGCCTCATGTA
TATGGTTCCCGCCATCTACCACCTGACACGCCAGGACTAG

Upstream 100 bases:

>100_bases
TACGCGCCTTCCGGGCGACTGCACAACGAGTTTACACTACAGGTGTGATCGTGATCCGGCCAAAGGCACAAGAACCGACA
GGACGCAAACGGAAAGCAAT

Downstream 100 bases:

>100_bases
GCCGCCGGCCCCATGGCCATGACCGCAATGGCTGCTCCGGCTGCGTCAGCGCTTGCCACGCGGCAGGCTTCTTTTTGCCT
CGCGTTCCCACATCTACAGC

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 679; Mature: 679

Protein sequence:

>679_residues
MRRDKLHDITAPTGSARCKNSPRKVTMPVLWGLAPDGFLSAALRTFKTRLFALRARCLHVLPLCALILCALPPGAPGTHL
AAAYVWGPRPALAAAASIPTPTPAEPRVHEPVVPVPTVTVPTVQAPVVQAPQLQPSGGQQRPGWSGSSGRSGNAGQAASL
QDAGNDGRQVSPTREIMGFLFGGNTGTASDNATAAPQDTASHPSTSIRNGSLNSTGPNGAPMPPGPIAVPLPAPVAPPAP
VAPVAPAPVPATPGNRVPARAVAEMQPQSPEAQLRQKQQNAERERQRQEKARRSSRPAKATETAGPEASRPAADHAGTPT
SVPPPAAKEENTPPDVPETPKAESPFTPGSPEAQANEAYQKGDFAQARAIWQHLADGGDGQSMNNLGVLYDLGLGVEPDE
GRALHWFAQSAAAGHPSGMSNYGRMLEQGRGIEANPHEAARWFDLAARQGQPEAQYNLGLMYESGHGVSRDYKAAAAWYS
RAAAQQQIDALARLGHLYRAGEGVEKNAARATLLLYAAAMRGSVHAMKELEAMAEASGVRHGAVLFGQRLDTANRTAMRD
TLSRAGMQPSRQDDAYICDLYIPGALVPGARQMALCYGPGRPAPLGFVELEYAAPHKDTAQSIMRMVSERFGPPSAGEGD
DGHIWNLGTVIVATRYNPAQQTVSLMYMVPAIYHLTRQD

Sequences:

>Translated_679_residues
MRRDKLHDITAPTGSARCKNSPRKVTMPVLWGLAPDGFLSAALRTFKTRLFALRARCLHVLPLCALILCALPPGAPGTHL
AAAYVWGPRPALAAAASIPTPTPAEPRVHEPVVPVPTVTVPTVQAPVVQAPQLQPSGGQQRPGWSGSSGRSGNAGQAASL
QDAGNDGRQVSPTREIMGFLFGGNTGTASDNATAAPQDTASHPSTSIRNGSLNSTGPNGAPMPPGPIAVPLPAPVAPPAP
VAPVAPAPVPATPGNRVPARAVAEMQPQSPEAQLRQKQQNAERERQRQEKARRSSRPAKATETAGPEASRPAADHAGTPT
SVPPPAAKEENTPPDVPETPKAESPFTPGSPEAQANEAYQKGDFAQARAIWQHLADGGDGQSMNNLGVLYDLGLGVEPDE
GRALHWFAQSAAAGHPSGMSNYGRMLEQGRGIEANPHEAARWFDLAARQGQPEAQYNLGLMYESGHGVSRDYKAAAAWYS
RAAAQQQIDALARLGHLYRAGEGVEKNAARATLLLYAAAMRGSVHAMKELEAMAEASGVRHGAVLFGQRLDTANRTAMRD
TLSRAGMQPSRQDDAYICDLYIPGALVPGARQMALCYGPGRPAPLGFVELEYAAPHKDTAQSIMRMVSERFGPPSAGEGD
DGHIWNLGTVIVATRYNPAQQTVSLMYMVPAIYHLTRQD
>Mature_679_residues
MRRDKLHDITAPTGSARCKNSPRKVTMPVLWGLAPDGFLSAALRTFKTRLFALRARCLHVLPLCALILCALPPGAPGTHL
AAAYVWGPRPALAAAASIPTPTPAEPRVHEPVVPVPTVTVPTVQAPVVQAPQLQPSGGQQRPGWSGSSGRSGNAGQAASL
QDAGNDGRQVSPTREIMGFLFGGNTGTASDNATAAPQDTASHPSTSIRNGSLNSTGPNGAPMPPGPIAVPLPAPVAPPAP
VAPVAPAPVPATPGNRVPARAVAEMQPQSPEAQLRQKQQNAERERQRQEKARRSSRPAKATETAGPEASRPAADHAGTPT
SVPPPAAKEENTPPDVPETPKAESPFTPGSPEAQANEAYQKGDFAQARAIWQHLADGGDGQSMNNLGVLYDLGLGVEPDE
GRALHWFAQSAAAGHPSGMSNYGRMLEQGRGIEANPHEAARWFDLAARQGQPEAQYNLGLMYESGHGVSRDYKAAAAWYS
RAAAQQQIDALARLGHLYRAGEGVEKNAARATLLLYAAAMRGSVHAMKELEAMAEASGVRHGAVLFGQRLDTANRTAMRD
TLSRAGMQPSRQDDAYICDLYIPGALVPGARQMALCYGPGRPAPLGFVELEYAAPHKDTAQSIMRMVSERFGPPSAGEGD
DGHIWNLGTVIVATRYNPAQQTVSLMYMVPAIYHLTRQD

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=239, Percent_Identity=29.7071129707113, Blast_Score=87, Evalue=7e-17,
Organism=Homo sapiens, GI151301150, Length=172, Percent_Identity=33.7209302325581, Blast_Score=80, Evalue=7e-15,
Organism=Escherichia coli, GI87081769, Length=145, Percent_Identity=37.2413793103448, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1786867, Length=114, Percent_Identity=32.4561403508772, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355295, Length=237, Percent_Identity=32.0675105485232, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 71675; Mature: 71675

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDKLHDITAPTGSARCKNSPRKVTMPVLWGLAPDGFLSAALRTFKTRLFALRARCLHV
CCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LPLCALILCALPPGAPGTHLAAAYVWGPRPALAAAASIPTPTPAEPRVHEPVVPVPTVTV
HHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PTVQAPVVQAPQLQPSGGQQRPGWSGSSGRSGNAGQAASLQDAGNDGRQVSPTREIMGFL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHH
FGGNTGTASDNATAAPQDTASHPSTSIRNGSLNSTGPNGAPMPPGPIAVPLPAPVAPPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
VAPVAPAPVPATPGNRVPARAVAEMQPQSPEAQLRQKQQNAERERQRQEKARRSSRPAKA
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TETAGPEASRPAADHAGTPTSVPPPAAKEENTPPDVPETPKAESPFTPGSPEAQANEAYQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
KGDFAQARAIWQHLADGGDGQSMNNLGVLYDLGLGVEPDEGRALHWFAQSAAAGHPSGMS
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHCCCCCCCHH
NYGRMLEQGRGIEANPHEAARWFDLAARQGQPEAQYNLGLMYESGHGVSRDYKAAAAWYS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
RAAAQQQIDALARLGHLYRAGEGVEKNAARATLLLYAAAMRGSVHAMKELEAMAEASGVR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
HGAVLFGQRLDTANRTAMRDTLSRAGMQPSRQDDAYICDLYIPGALVPGARQMALCYGPG
CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCC
RPAPLGFVELEYAAPHKDTAQSIMRMVSERFGPPSAGEGDDGHIWNLGTVIVATRYNPAQ
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEEEECCCHHH
QTVSLMYMVPAIYHLTRQD
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRDKLHDITAPTGSARCKNSPRKVTMPVLWGLAPDGFLSAALRTFKTRLFALRARCLHV
CCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LPLCALILCALPPGAPGTHLAAAYVWGPRPALAAAASIPTPTPAEPRVHEPVVPVPTVTV
HHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PTVQAPVVQAPQLQPSGGQQRPGWSGSSGRSGNAGQAASLQDAGNDGRQVSPTREIMGFL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHH
FGGNTGTASDNATAAPQDTASHPSTSIRNGSLNSTGPNGAPMPPGPIAVPLPAPVAPPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
VAPVAPAPVPATPGNRVPARAVAEMQPQSPEAQLRQKQQNAERERQRQEKARRSSRPAKA
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TETAGPEASRPAADHAGTPTSVPPPAAKEENTPPDVPETPKAESPFTPGSPEAQANEAYQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
KGDFAQARAIWQHLADGGDGQSMNNLGVLYDLGLGVEPDEGRALHWFAQSAAAGHPSGMS
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHCCCCCCCHH
NYGRMLEQGRGIEANPHEAARWFDLAARQGQPEAQYNLGLMYESGHGVSRDYKAAAAWYS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
RAAAQQQIDALARLGHLYRAGEGVEKNAARATLLLYAAAMRGSVHAMKELEAMAEASGVR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
HGAVLFGQRLDTANRTAMRDTLSRAGMQPSRQDDAYICDLYIPGALVPGARQMALCYGPG
CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCC
RPAPLGFVELEYAAPHKDTAQSIMRMVSERFGPPSAGEGDDGHIWNLGTVIVATRYNPAQ
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEEEECCCHHH
QTVSLMYMVPAIYHLTRQD
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]