| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is pntA [H]
Identifier: 220903459
GI number: 220903459
Start: 215970
End: 217142
Strand: Direct
Name: pntA [H]
Synonym: Ddes_0173
Alternate gene names: 220903459
Gene position: 215970-217142 (Clockwise)
Preceding gene: 220903458
Following gene: 220903460
Centisome position: 7.52
GC content: 60.36
Gene sequence:
>1173_bases ATGAAGTTTCAGGGTATGACTATCGGTGTGCCGAAGGAAATCATGCACGGCGAACGCCGCGTGTCCGCGACTCCCGACAC CGTCAAGAAGATGGTTGCCGACGGCGCCACGGTTCTTGTTGAAAAGGGTGCCGGCGACGGCGCGTTCTTTGCTGACAGCG CCTATGTTGAAGCCGGGGGCAAGATCATCGAGGACGTTCAGGAAATCTTTGCCAAGGCTGACGTTATCCTGAAGGTGAAA GAGCCTCTGTTCAACGACAAGGTGAACAAGCACGAAGCGGAAATGGTGCGTGACGGGCAGTATCTGATCACGTTCCTGCA CCCCGCGGCTCCCGTGAACCACGAAATGATGAAAAAGCTGGCCGCCACGGGCGTGATCAGCATTACACTGGATGGTATTC CGCGCATTTCGCGTGCTCAGGGCATGGACGCTTTGACCTCCATGAGCACGGTTGCCGGGTACAAGGGCGTGCTTATGGCG GCCAACCGGCTTGCCAAGTTCATGCCTATGGTTGGTACGGCCGTGGGGGTCATCAAGCCTGCCAACGTGCTGGTGATCGG CACGGGCGTGGCCGGGCTTCAGGCCGTGGCCACTGCCAAGCGCCTGGGCGCTGTTGTCACGGCTGTGGACATCCGGCCCG ACGCGCGCGAGCAGTCCATGAGCCTTGGCGCCAAGCCCTTTGATGTGGGTGTGCCCGCCGAGGTGGCCATTGGCGAGGGC GGCTACGCCCAGCGCCTGAGCGACGAATGGCTGAACAAGGAACGCGAGGCCCTGAAGCCCCTGGTGAAGGACGCCGACAT CATCATCCTTTCGGCCCTGATCCCCGGCAAGCTGGCCCCGATCCTGATCACCAAGGAAATGGTGGCTTCTATGGCTCCCG GTTCCAGCATCGTGGACATTTCCATTGACCAGGGCGGCAACTGCGAGCTGACCGAAGCCGGTGAAGTGGTGGTCAAGCAC GGCGTGACCATCGACGGCACCAAGAACATCCCCGGCATGATGCCCACAAGCTCCACCTGGATGTTTGCCAACAACGTGTA CCAGCTGCTTGCCTTCCTTGCTCAGGACGGCAAGATCGTTCTGGACAGGACCGACCCCATCATCGAATCCACGCTGAGCA CCATCGACAAGCAGATTGTCCACCGTGGCGCTCGTGAAGCCATGGGCCTTTAG
Upstream 100 bases:
>100_bases GTTCAGATGCTTTGAAATGTTTGGGGCGAGAGCGTACAGGACGCTGGATGCCCGTATATGATGCAACAGGTTTATACAAT TACCTTCAAGGAGCCTTATA
Downstream 100 bases:
>100_bases TCGTTAAAGAACGCCGGGCGCGGCCTGTTCCGCGTCCGGCGTTCCGGCATACAGGCCGGGAAAAATATTATCCGAGGAAG ACATATGACCCCATTTACCC
Product: NAD(P)(+) transhydrogenase
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKFQGMTIGVPKEIMHGERRVSATPDTVKKMVADGATVLVEKGAGDGAFFADSAYVEAGGKIIEDVQEIFAKADVILKVK EPLFNDKVNKHEAEMVRDGQYLITFLHPAAPVNHEMMKKLAATGVISITLDGIPRISRAQGMDALTSMSTVAGYKGVLMA ANRLAKFMPMVGTAVGVIKPANVLVIGTGVAGLQAVATAKRLGAVVTAVDIRPDAREQSMSLGAKPFDVGVPAEVAIGEG GYAQRLSDEWLNKEREALKPLVKDADIIILSALIPGKLAPILITKEMVASMAPGSSIVDISIDQGGNCELTEAGEVVVKH GVTIDGTKNIPGMMPTSSTWMFANNVYQLLAFLAQDGKIVLDRTDPIIESTLSTIDKQIVHRGAREAMGL
Sequences:
>Translated_390_residues MKFQGMTIGVPKEIMHGERRVSATPDTVKKMVADGATVLVEKGAGDGAFFADSAYVEAGGKIIEDVQEIFAKADVILKVK EPLFNDKVNKHEAEMVRDGQYLITFLHPAAPVNHEMMKKLAATGVISITLDGIPRISRAQGMDALTSMSTVAGYKGVLMA ANRLAKFMPMVGTAVGVIKPANVLVIGTGVAGLQAVATAKRLGAVVTAVDIRPDAREQSMSLGAKPFDVGVPAEVAIGEG GYAQRLSDEWLNKEREALKPLVKDADIIILSALIPGKLAPILITKEMVASMAPGSSIVDISIDQGGNCELTEAGEVVVKH GVTIDGTKNIPGMMPTSSTWMFANNVYQLLAFLAQDGKIVLDRTDPIIESTLSTIDKQIVHRGAREAMGL >Mature_390_residues MKFQGMTIGVPKEIMHGERRVSATPDTVKKMVADGATVLVEKGAGDGAFFADSAYVEAGGKIIEDVQEIFAKADVILKVK EPLFNDKVNKHEAEMVRDGQYLITFLHPAAPVNHEMMKKLAATGVISITLDGIPRISRAQGMDALTSMSTVAGYKGVLMA ANRLAKFMPMVGTAVGVIKPANVLVIGTGVAGLQAVATAKRLGAVVTAVDIRPDAREQSMSLGAKPFDVGVPAEVAIGEG GYAQRLSDEWLNKEREALKPLVKDADIIILSALIPGKLAPILITKEMVASMAPGSSIVDISIDQGGNCELTEAGEVVVKH GVTIDGTKNIPGMMPTSSTWMFANNVYQLLAFLAQDGKIVLDRTDPIIESTLSTIDKQIVHRGAREAMGL
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=354, Percent_Identity=40.1129943502825, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI122939153, Length=354, Percent_Identity=40.1129943502825, Blast_Score=276, Evalue=3e-74, Organism=Escherichia coli, GI1787887, Length=367, Percent_Identity=42.7792915531335, Blast_Score=280, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17550456, Length=379, Percent_Identity=40.3693931398417, Blast_Score=275, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 41359; Mature: 41359
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFQGMTIGVPKEIMHGERRVSATPDTVKKMVADGATVLVEKGAGDGAFFADSAYVEAGG CCCCCCEECCCHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEECCHHHHCCC KIIEDVQEIFAKADVILKVKEPLFNDKVNKHEAEMVRDGQYLITFLHPAAPVNHEMMKKL HHHHHHHHHHHHCCEEEEECCCHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH AATGVISITLDGIPRISRAQGMDALTSMSTVAGYKGVLMAANRLAKFMPMVGTAVGVIKP HHCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC ANVLVIGTGVAGLQAVATAKRLGAVVTAVDIRPDAREQSMSLGAKPFDVGVPAEVAIGEG CCEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEECCC GYAQRLSDEWLNKEREALKPLVKDADIIILSALIPGKLAPILITKEMVASMAPGSSIVDI CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEEEHHHHHHCCCCCEEEEE SIDQGGNCELTEAGEVVVKHGVTIDGTKNIPGMMPTSSTWMFANNVYQLLAFLAQDGKIV EECCCCCEEEECCCCEEEECCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCEEE LDRTDPIIESTLSTIDKQIVHRGAREAMGL EECCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFQGMTIGVPKEIMHGERRVSATPDTVKKMVADGATVLVEKGAGDGAFFADSAYVEAGG CCCCCCEECCCHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEECCHHHHCCC KIIEDVQEIFAKADVILKVKEPLFNDKVNKHEAEMVRDGQYLITFLHPAAPVNHEMMKKL HHHHHHHHHHHHCCEEEEECCCHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH AATGVISITLDGIPRISRAQGMDALTSMSTVAGYKGVLMAANRLAKFMPMVGTAVGVIKP HHCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC ANVLVIGTGVAGLQAVATAKRLGAVVTAVDIRPDAREQSMSLGAKPFDVGVPAEVAIGEG CCEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEECCC GYAQRLSDEWLNKEREALKPLVKDADIIILSALIPGKLAPILITKEMVASMAPGSSIVDI CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEEEHHHHHHCCCCCEEEEE SIDQGGNCELTEAGEVVVKHGVTIDGTKNIPGMMPTSSTWMFANNVYQLLAFLAQDGKIV EECCCCCEEEECCCCEEEECCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCEEE LDRTDPIIESTLSTIDKQIVHRGAREAMGL EECCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]