BacMap

Definition	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession	NC_011883
Length	2,873,437

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The map label for this gene is fbpC [H]

Identifier: 220903456

GI number: 220903456

Start: 211230

End: 212006

Strand: Direct

Name: fbpC [H]

Synonym: Ddes_0170

Alternate gene names: 220903456

Gene position: 211230-212006 (Clockwise)

Preceding gene: 220903455

Following gene: 220903457

Centisome position: 7.35

GC content: 62.55

Gene sequence:

>777_bases
ATGATTTCCTTGCGCTTGTATAAAAGCTTCAAAAACGCGGCCGTGCCTTTCAGCCTGGATGTGGATTACGAAATCGGCGA
CGAACACAAAAACGTGGTGCTCTTCGGGCCTTCCGGTTCCGGCAAGAGTCTGACCATGCAGTGTCTCGCCGGGCTTGTAC
GGCCGGATTCCGGGCATATCCGTCTTGGTGGCCGCACCCTGTATGACGGGCAGGCCAATGTTTTTATTCCGGCGCAGCGC
CGCCGTATCGGCTACATGTTTCAGGACTATGCGCTTTTTCCTCACCTGACCCTGTTGCAGAATGTGGCCTACAGTGGCAC
GGGGCTTTGGCCCTGGCGCGTCTGCCCGGCCCAGCAGGAGCGGGCGCAGGCTGTGCTGGAGCGCTTCGGCATAGGCCATT
TGGCCCGCAATCTGCCTTCGCAGCTTTCCGGCGGGCAGCGGCAGCGGGCGGCACTGGCCCGCGCGCTTAATGCCGGGCCG
GAGCTGCTGCTGCTGGACGAGCCGTTTTCGGCGCTGGACCCGCTGTTGCGGGAACGTCTGCGCGAAGAGCTGCTGGAACT
TATTGCCGGGCTTACTATTCCTGCTGTCATCATCACCCACGATCCGGGCGATGTGGATGCTTTTGCGGGCAGCCTGATTC
TGTATGATCACGGCCACGCCAGGCTGGTTCCCGACTATACGGAGCTGCGGCGGGGATTCGGCAGCCCGGGGCACTGCCTG
CGCCATCTGCAGGAGCAGGCAGCTGCGGCGGGCTGCCCTGCGGAGCAGGCCTTTTGA

Upstream 100 bases:

>100_bases
ATGATGTGCAGGCCACCTGGCTTGTCATTGTGACCTCTCTGGCCTGCGTGAGCATGCTTATGGCGGCGGAACTGCTGCTC
AAGCTGAAAAGGCGGCGGCG

Downstream 100 bases:

>100_bases
TTTTGCGCCGTCGGCAAACAGCGTGCCCGTAAGGGCGCGGCAGCACACGGCCATCGCGACTCCGGCCGTGTGCTGCCGCC
AGCCGGGCCTGCCCCGGCCT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MISLRLYKSFKNAAVPFSLDVDYEIGDEHKNVVLFGPSGSGKSLTMQCLAGLVRPDSGHIRLGGRTLYDGQANVFIPAQR
RRIGYMFQDYALFPHLTLLQNVAYSGTGLWPWRVCPAQQERAQAVLERFGIGHLARNLPSQLSGGQRQRAALARALNAGP
ELLLLDEPFSALDPLLRERLREELLELIAGLTIPAVIITHDPGDVDAFAGSLILYDHGHARLVPDYTELRRGFGSPGHCL
RHLQEQAAAAGCPAEQAF

Sequences:

>Translated_258_residues
MISLRLYKSFKNAAVPFSLDVDYEIGDEHKNVVLFGPSGSGKSLTMQCLAGLVRPDSGHIRLGGRTLYDGQANVFIPAQR
RRIGYMFQDYALFPHLTLLQNVAYSGTGLWPWRVCPAQQERAQAVLERFGIGHLARNLPSQLSGGQRQRAALARALNAGP
ELLLLDEPFSALDPLLRERLREELLELIAGLTIPAVIITHDPGDVDAFAGSLILYDHGHARLVPDYTELRRGFGSPGHCL
RHLQEQAAAAGCPAEQAF
>Mature_258_residues
MISLRLYKSFKNAAVPFSLDVDYEIGDEHKNVVLFGPSGSGKSLTMQCLAGLVRPDSGHIRLGGRTLYDGQANVFIPAQR
RRIGYMFQDYALFPHLTLLQNVAYSGTGLWPWRVCPAQQERAQAVLERFGIGHLARNLPSQLSGGQRQRAALARALNAGP
ELLLLDEPFSALDPLLRERLREELLELIAGLTIPAVIITHDPGDVDAFAGSLILYDHGHARLVPDYTELRRGFGSPGHCL
RHLQEQAAAAGCPAEQAF

Specific function: Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system [H]

COG id: COG1118

COG function: function code P; ABC-type sulfate/molybdate transport systems, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI105990541, Length=212, Percent_Identity=27.8301886792453, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI9961252, Length=234, Percent_Identity=31.1965811965812, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI9961250, Length=234, Percent_Identity=31.1965811965812, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4505771, Length=234, Percent_Identity=31.1965811965812, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI171184400, Length=238, Percent_Identity=31.9327731092437, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI42490749, Length=200, Percent_Identity=30, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI21536376, Length=190, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI42741659, Length=184, Percent_Identity=33.695652173913, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI27477115, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI255708477, Length=186, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI148612844, Length=186, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI45446740, Length=232, Percent_Identity=25.8620689655172, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI47078218, Length=232, Percent_Identity=25.8620689655172, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI116734710, Length=213, Percent_Identity=26.7605633802817, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI27881501, Length=205, Percent_Identity=24.390243902439, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI30795238, Length=205, Percent_Identity=24.390243902439, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1788761, Length=217, Percent_Identity=39.1705069124424, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1787712, Length=191, Percent_Identity=40.3141361256544, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI87081791, Length=188, Percent_Identity=42.0212765957447, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1787029, Length=226, Percent_Identity=37.1681415929204, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1788450, Length=189, Percent_Identity=39.6825396825397, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=36.9158878504673, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786872, Length=191, Percent_Identity=37.17277486911, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1789672, Length=194, Percent_Identity=38.659793814433, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1786253, Length=176, Percent_Identity=40.9090909090909, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789032, Length=175, Percent_Identity=38.2857142857143, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI87081709, Length=201, Percent_Identity=36.318407960199, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1790467, Length=234, Percent_Identity=34.6153846153846, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1790544, Length=226, Percent_Identity=33.6283185840708, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1788225, Length=217, Percent_Identity=33.6405529953917, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787089, Length=209, Percent_Identity=35.4066985645933, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI87082267, Length=217, Percent_Identity=33.6405529953917, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788053, Length=229, Percent_Identity=35.3711790393013, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786703, Length=172, Percent_Identity=34.8837209302326, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1786563, Length=193, Percent_Identity=36.2694300518135, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI87081834, Length=199, Percent_Identity=33.1658291457286, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787105, Length=178, Percent_Identity=38.2022471910112, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786981, Length=188, Percent_Identity=34.0425531914894, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1786398, Length=190, Percent_Identity=33.1578947368421, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788644, Length=188, Percent_Identity=35.6382978723404, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789873, Length=193, Percent_Identity=34.7150259067358, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1787164, Length=188, Percent_Identity=34.5744680851064, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87081782, Length=168, Percent_Identity=33.9285714285714, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789586, Length=211, Percent_Identity=34.1232227488152, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789593, Length=173, Percent_Identity=31.7919075144509, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI48994943, Length=168, Percent_Identity=33.9285714285714, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1790162, Length=188, Percent_Identity=34.5744680851064, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1787500, Length=205, Percent_Identity=29.7560975609756, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788506, Length=206, Percent_Identity=32.5242718446602, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790739, Length=198, Percent_Identity=32.3232323232323, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786698, Length=190, Percent_Identity=29.4736842105263, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI145693107, Length=189, Percent_Identity=34.3915343915344, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789864, Length=203, Percent_Identity=29.5566502463054, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786803, Length=208, Percent_Identity=32.6923076923077, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789891, Length=196, Percent_Identity=33.6734693877551, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788165, Length=215, Percent_Identity=31.1627906976744, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789963, Length=232, Percent_Identity=30.1724137931034, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=175, Percent_Identity=33.7142857142857, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788897, Length=145, Percent_Identity=33.1034482758621, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789962, Length=194, Percent_Identity=29.8969072164948, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786319, Length=202, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787547, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787792, Length=226, Percent_Identity=26.1061946902655, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786345, Length=184, Percent_Identity=33.1521739130435, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI48994883, Length=220, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786975, Length=188, Percent_Identity=32.4468085106383, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193208177, Length=225, Percent_Identity=32.8888888888889, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI212646699, Length=201, Percent_Identity=31.3432835820896, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17565586, Length=216, Percent_Identity=27.3148148148148, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=231, Percent_Identity=30.7359307359307, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=231, Percent_Identity=30.7359307359307, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=231, Percent_Identity=30.7359307359307, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=147, Percent_Identity=35.3741496598639, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=197, Percent_Identity=31.4720812182741, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=164, Percent_Identity=32.3170731707317, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=202, Percent_Identity=30.6930693069307, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=182, Percent_Identity=30.2197802197802, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=212, Percent_Identity=30.6603773584906, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=184, Percent_Identity=33.695652173913, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115533592, Length=172, Percent_Identity=33.1395348837209, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71992285, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=216, Percent_Identity=25.462962962963, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=179, Percent_Identity=30.7262569832402, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=223, Percent_Identity=29.1479820627803, Blast_Score=72, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6323217, Length=203, Percent_Identity=32.0197044334975, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324985, Length=237, Percent_Identity=26.5822784810127, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24650855, Length=174, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24650853, Length=174, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24582014, Length=169, Percent_Identity=33.1360946745562, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24582012, Length=169, Percent_Identity=33.1360946745562, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI281362751, Length=174, Percent_Identity=33.9080459770115, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI85725262, Length=202, Percent_Identity=31.1881188118812, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI85726357, Length=182, Percent_Identity=32.967032967033, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24659289, Length=181, Percent_Identity=33.1491712707182, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281363262, Length=204, Percent_Identity=32.3529411764706, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24653245, Length=204, Percent_Identity=32.3529411764706, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI45552199, Length=148, Percent_Identity=36.4864864864865, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581407, Length=148, Percent_Identity=36.4864864864865, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666092, Length=208, Percent_Identity=28.3653846153846, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581409, Length=210, Percent_Identity=32.3809523809524, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21357907, Length=178, Percent_Identity=33.7078651685393, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17136662, Length=176, Percent_Identity=32.3863636363636, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI28574259, Length=210, Percent_Identity=28.0952380952381, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015853
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.30 [H]

Molecular weight: Translated: 28346; Mature: 28346

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLRLYKSFKNAAVPFSLDVDYEIGDEHKNVVLFGPSGSGKSLTMQCLAGLVRPDSGHI
CCEEHEEHHHHCCCCCEEEECCCEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEE
RLGGRTLYDGQANVFIPAQRRRIGYMFQDYALFPHLTLLQNVAYSGTGLWPWRVCPAQQE
EECCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHH
RAQAVLERFGIGHLARNLPSQLSGGQRQRAALARALNAGPELLLLDEPFSALDPLLRERL
HHHHHHHHHCHHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
REELLELIAGLTIPAVIITHDPGDVDAFAGSLILYDHGHARLVPDYTELRRGFGSPGHCL
HHHHHHHHHCCCCCEEEEECCCCCHHHHHCEEEEEECCCCEECCCHHHHHHCCCCHHHHH
RHLQEQAAAAGCPAEQAF
HHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MISLRLYKSFKNAAVPFSLDVDYEIGDEHKNVVLFGPSGSGKSLTMQCLAGLVRPDSGHI
CCEEHEEHHHHCCCCCEEEECCCEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEE
RLGGRTLYDGQANVFIPAQRRRIGYMFQDYALFPHLTLLQNVAYSGTGLWPWRVCPAQQE
EECCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHH
RAQAVLERFGIGHLARNLPSQLSGGQRQRAALARALNAGPELLLLDEPFSALDPLLRERL
HHHHHHHHHCHHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
REELLELIAGLTIPAVIITHDPGDVDAFAGSLILYDHGHARLVPDYTELRRGFGSPGHCL
HHHHHHHHHCCCCCEEEEECCCCCHHHHHCEEEEEECCCCEECCCHHHHHHCCCCHHHHH
RHLQEQAAAAGCPAEQAF
HHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA