| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903432
Identifier: 220903432
GI number: 220903432
Start: 183917
End: 185194
Strand: Reverse
Name: 220903432
Synonym: Ddes_0146
Alternate gene names: NA
Gene position: 185194-183917 (Counterclockwise)
Preceding gene: 220903433
Following gene: 220903425
Centisome position: 6.45
GC content: 57.04
Gene sequence:
>1278_bases ATGCCAAATCTTCACAGTTTCCTACAGCGGCTTTTTCCCATATGCCGCAGCATTACGGGCAATGGCGTCCGGCAGACCCT TTCCATACTCAAGGAAGAGCTGCCCGCCCTGCAACTGCATGAAGTGCCTTCCGGCACACCGGTTTTCGACTGGACCGTAC CGGACGAATGGAACATCACCGAGGCACGGTTGACCGGTCCGGATGGCGAAGTCATTGCAGACTTTGCCCACTGCAACCTG CACGTGGTCGGTTATTCCGAACCTGTAGACATCCACCTGTCGCTGGACGATCTGCAGGAGCACCTCCATTCCCGGCCTGA CCTGCCGGAAGCCATACCCTACGTAACGTCCTACTACGCCAGGCGCTGGGGCTTCTGCCTCAAGCACAGCATACGCCAGA AGCTCAAGCCCGGCACATATCATGCGGTCATACGGGCTTCTCTGGAACCGGGGCATCTTTCCTATGGAGAGTTTGTGTTG CCGGGGCAAAGCGAAAAAGAAATATTTCTGTCCACCTATGTCTGCCATCCATCCATGGCAAATAACGAGCTTTCAGGCCC GGTGGTGGCTACCGCCCTGGCTCGCTGGCTGCAAAGTGCGCCACGACGCTATACCTACCGCATTGTTTTTGTGCCTGAAA CCATCGGGGCGATCACCTACCTGAGCAAAAATCACCAGATGCTGCGCCAACGTGTGGCGGCAGGCTTCAACCTTACCTGC CTGGGCGACGACCGCGCCTATTCCTATGTACCCAGCCGCAAGGGAAACACCCTGGCCGACAGGGCGGCACTGCACGTATT GCGGCACTTTGCCCCGGATTTTGTGCGCTACACCTTTCATGACAGAGGCAGCGATGAGCGCCAGTACTGCTCACCCGGCA TTGACCTGCCCCTGTGCAGCGTCATGCGCACAAAATATCACGCCTTTCCCGAGTACCATACCTCACTGGACGACTGCTCT CTGGTAACGGAAAAAGGCCTTCAGGGCGGCTTTGAAATCATGCGCAAGATACTTGAAACACTGGAAGAAGATGTCACATA CCAGTGCCGGGTGCTGTGCGAGCCGCAACTGGGCAGGCGCGGGCTTTACCCCACACTGAGCACCCGGTATTCCTGTACCG AGCAGGTAGACCTCATGATGGACCTGCTGGCCTATGCCGACGGCAGCATGAGCCTGCTGGAAGAAGCGGAAACCGTGGGC GCGGATATTTTCCGCTGTGCTTCTGTCATGCGCCAGCTTGAAGAGCAGGGCGTCATATGCAGAAAAAGTGAAAGCTGA
Upstream 100 bases:
>100_bases GCGCCATGCCAGTATGTGCCGGCCGTAAAGGCTGTTCTTCTTTCCGTATCTTTCACGCCCGCCCGGTCCGGGCGGGCAAG AGGCACACAGGGGCTTTCCC
Downstream 100 bases:
>100_bases ACGTAAAAAAGCATATGCCCGTTGAGAACAGGCGCTCTCAACGGGCATATGCCGTCTGTTCCGGTATGGCGTCGCGCAGG CAAACTGCGCTCGCGCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MPNLHSFLQRLFPICRSITGNGVRQTLSILKEELPALQLHEVPSGTPVFDWTVPDEWNITEARLTGPDGEVIADFAHCNL HVVGYSEPVDIHLSLDDLQEHLHSRPDLPEAIPYVTSYYARRWGFCLKHSIRQKLKPGTYHAVIRASLEPGHLSYGEFVL PGQSEKEIFLSTYVCHPSMANNELSGPVVATALARWLQSAPRRYTYRIVFVPETIGAITYLSKNHQMLRQRVAAGFNLTC LGDDRAYSYVPSRKGNTLADRAALHVLRHFAPDFVRYTFHDRGSDERQYCSPGIDLPLCSVMRTKYHAFPEYHTSLDDCS LVTEKGLQGGFEIMRKILETLEEDVTYQCRVLCEPQLGRRGLYPTLSTRYSCTEQVDLMMDLLAYADGSMSLLEEAETVG ADIFRCASVMRQLEEQGVICRKSES
Sequences:
>Translated_425_residues MPNLHSFLQRLFPICRSITGNGVRQTLSILKEELPALQLHEVPSGTPVFDWTVPDEWNITEARLTGPDGEVIADFAHCNL HVVGYSEPVDIHLSLDDLQEHLHSRPDLPEAIPYVTSYYARRWGFCLKHSIRQKLKPGTYHAVIRASLEPGHLSYGEFVL PGQSEKEIFLSTYVCHPSMANNELSGPVVATALARWLQSAPRRYTYRIVFVPETIGAITYLSKNHQMLRQRVAAGFNLTC LGDDRAYSYVPSRKGNTLADRAALHVLRHFAPDFVRYTFHDRGSDERQYCSPGIDLPLCSVMRTKYHAFPEYHTSLDDCS LVTEKGLQGGFEIMRKILETLEEDVTYQCRVLCEPQLGRRGLYPTLSTRYSCTEQVDLMMDLLAYADGSMSLLEEAETVG ADIFRCASVMRQLEEQGVICRKSES >Mature_424_residues PNLHSFLQRLFPICRSITGNGVRQTLSILKEELPALQLHEVPSGTPVFDWTVPDEWNITEARLTGPDGEVIADFAHCNLH VVGYSEPVDIHLSLDDLQEHLHSRPDLPEAIPYVTSYYARRWGFCLKHSIRQKLKPGTYHAVIRASLEPGHLSYGEFVLP GQSEKEIFLSTYVCHPSMANNELSGPVVATALARWLQSAPRRYTYRIVFVPETIGAITYLSKNHQMLRQRVAAGFNLTCL GDDRAYSYVPSRKGNTLADRAALHVLRHFAPDFVRYTFHDRGSDERQYCSPGIDLPLCSVMRTKYHAFPEYHTSLDDCSL VTEKGLQGGFEIMRKILETLEEDVTYQCRVLCEPQLGRRGLYPTLSTRYSCTEQVDLMMDLLAYADGSMSLLEEAETVGA DIFRCASVMRQLEEQGVICRKSES
Specific function: Unknown
COG id: COG4310
COG function: function code R; Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48123; Mature: 47992
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLHSFLQRLFPICRSITGNGVRQTLSILKEELPALQLHEVPSGTPVFDWTVPDEWNIT CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCE EARLTGPDGEVIADFAHCNLHVVGYSEPVDIHLSLDDLQEHLHSRPDLPEAIPYVTSYYA EEEECCCCCCEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHH RRWGFCLKHSIRQKLKPGTYHAVIRASLEPGHLSYGEFVLPGQSEKEIFLSTYVCHPSMA HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCC NNELSGPVVATALARWLQSAPRRYTYRIVFVPETIGAITYLSKNHQMLRQRVAAGFNLTC CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCEEE LGDDRAYSYVPSRKGNTLADRAALHVLRHFAPDFVRYTFHDRGSDERQYCSPGIDLPLCS ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHEEEECCCCCCCHHHCCCCCCCHHHH VMRTKYHAFPEYHTSLDDCSLVTEKGLQGGFEIMRKILETLEEDVTYQCRVLCEPQLGRR HHHHHHHCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC GLYPTLSTRYSCTEQVDLMMDLLAYADGSMSLLEEAETVGADIFRCASVMRQLEEQGVIC CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE RKSES ECCCC >Mature Secondary Structure PNLHSFLQRLFPICRSITGNGVRQTLSILKEELPALQLHEVPSGTPVFDWTVPDEWNIT CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCE EARLTGPDGEVIADFAHCNLHVVGYSEPVDIHLSLDDLQEHLHSRPDLPEAIPYVTSYYA EEEECCCCCCEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHH RRWGFCLKHSIRQKLKPGTYHAVIRASLEPGHLSYGEFVLPGQSEKEIFLSTYVCHPSMA HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCC NNELSGPVVATALARWLQSAPRRYTYRIVFVPETIGAITYLSKNHQMLRQRVAAGFNLTC CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCEEE LGDDRAYSYVPSRKGNTLADRAALHVLRHFAPDFVRYTFHDRGSDERQYCSPGIDLPLCS ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHEEEECCCCCCCHHHCCCCCCCHHHH VMRTKYHAFPEYHTSLDDCSLVTEKGLQGGFEIMRKILETLEEDVTYQCRVLCEPQLGRR HHHHHHHCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC GLYPTLSTRYSCTEQVDLMMDLLAYADGSMSLLEEAETVGADIFRCASVMRQLEEQGVIC CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE RKSES ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA