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The map label for this gene is yrhP [H]

Identifier: 220903386

GI number: 220903386

Start: 129739

End: 130443

Strand: Reverse

Name: yrhP [H]

Synonym: Ddes_0100

Alternate gene names: 220903386

Gene position: 130443-129739 (Counterclockwise)

Preceding gene: 220903387

Following gene: 220903385

Centisome position: 4.54

GC content: 60.0

Gene sequence:

>705_bases
ATGATTTCACTGGAAAACCTGCTGTTGTTCGTACCCATGGCGGCACTGCTGGTCATGCTGCCGGGACCGGACTTTGCCCT
TATCGCCAAAATATCGCTGCTCAACGGCCGCCCCCAGGGGCAGGCCGCAGCCTGTGGTGTGGCCCTGGGCATAAGCGTAC
ATACCACGGCCGCCATGCTCGGCATTTCCGCCATCATCGCGCAGTCCGTGTTGTGGTTCAGCATCCTGAAATACGTGGGC
GCGGCCTACCTTATCTGGCTCGGCATCCAGGCATTGCGTCATGGGCGCCAGGCCAGCGCGGCGGTGGTGAAGGTTGCTCC
GCAGGCTGACGACCTGAAAGAGCATGCCCCGGCGCACGGCGTCATGAAAAAACCCGCAGCCGCTCCACACCTTACGGGCC
GCCAGTGGTGGTCGTTTTTTCGTCAGGGCTTTCTGACCAATGCCCTGAACCCCAAGGCCGTCATCATATTCCTGACGTTT
CTGCCGCAGTTCATGAATCCGCACGCTCCGCTTGGCCCGCAGTTTCTGGAGCTTGGCGGCATACTGTCGGCCCTGTGCCT
GCTCTGGTATGTGCCCCTGGCCTACATGCTCGGCCGTGTGCGTCATATCTTTGAAAGCAGTCGCTTTCAGCTCTGGCTGC
AACGCTTTACAGGTTTTATTTTCATAGCCTTCGGCCTCAAACTGGCCGCGGCGCAGTCCCGCTAA

Upstream 100 bases:

>100_bases
TGGACAGTACGCCGCAACAACGGCAAGAACATCCCCAGAAGGCATGGCGCATCTGACCGCACTGATGCGCCATGCCGCCC
CGCAGGGCAGGAAAACACAC

Downstream 100 bases:

>100_bases
CCAGCGTCGCGCCAACGGCCTCAAAACCCAGCAAAAAGGTCTGCCACCATGATTGAACTTATAAGCAATGCCGTTGTCAT
TGATGGAAACACCATCCGCA

Product: lysine exporter LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MISLENLLLFVPMAALLVMLPGPDFALIAKISLLNGRPQGQAAACGVALGISVHTTAAMLGISAIIAQSVLWFSILKYVG
AAYLIWLGIQALRHGRQASAAVVKVAPQADDLKEHAPAHGVMKKPAAAPHLTGRQWWSFFRQGFLTNALNPKAVIIFLTF
LPQFMNPHAPLGPQFLELGGILSALCLLWYVPLAYMLGRVRHIFESSRFQLWLQRFTGFIFIAFGLKLAAAQSR

Sequences:

>Translated_234_residues
MISLENLLLFVPMAALLVMLPGPDFALIAKISLLNGRPQGQAAACGVALGISVHTTAAMLGISAIIAQSVLWFSILKYVG
AAYLIWLGIQALRHGRQASAAVVKVAPQADDLKEHAPAHGVMKKPAAAPHLTGRQWWSFFRQGFLTNALNPKAVIIFLTF
LPQFMNPHAPLGPQFLELGGILSALCLLWYVPLAYMLGRVRHIFESSRFQLWLQRFTGFIFIAFGLKLAAAQSR
>Mature_234_residues
MISLENLLLFVPMAALLVMLPGPDFALIAKISLLNGRPQGQAAACGVALGISVHTTAAMLGISAIIAQSVLWFSILKYVG
AAYLIWLGIQALRHGRQASAAVVKVAPQADDLKEHAPAHGVMKKPAAAPHLTGRQWWSFFRQGFLTNALNPKAVIIFLTF
LPQFMNPHAPLGPQFLELGGILSALCLLWYVPLAYMLGRVRHIFESSRFQLWLQRFTGFIFIAFGLKLAAAQSR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1786522, Length=210, Percent_Identity=27.6190476190476, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788099, Length=223, Percent_Identity=26.457399103139, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI48994979, Length=231, Percent_Identity=25.974025974026, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI48994978, Length=231, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 25541; Mature: 25541

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLENLLLFVPMAALLVMLPGPDFALIAKISLLNGRPQGQAAACGVALGISVHTTAAML
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GISAIIAQSVLWFSILKYVGAAYLIWLGIQALRHGRQASAAVVKVAPQADDLKEHAPAHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHHCCCCC
VMKKPAAAPHLTGRQWWSFFRQGFLTNALNPKAVIIFLTFLPQFMNPHAPLGPQFLELGG
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ILSALCLLWYVPLAYMLGRVRHIFESSRFQLWLQRFTGFIFIAFGLKLAAAQSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISLENLLLFVPMAALLVMLPGPDFALIAKISLLNGRPQGQAAACGVALGISVHTTAAML
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GISAIIAQSVLWFSILKYVGAAYLIWLGIQALRHGRQASAAVVKVAPQADDLKEHAPAHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHHCCCCC
VMKKPAAAPHLTGRQWWSFFRQGFLTNALNPKAVIIFLTFLPQFMNPHAPLGPQFLELGG
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ILSALCLLWYVPLAYMLGRVRHIFESSRFQLWLQRFTGFIFIAFGLKLAAAQSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]