Click here to switch to the map view.

The map label for this gene is ybhJ [H]

Identifier: 220903385

GI number: 220903385

Start: 127384

End: 129690

Strand: Reverse

Name: ybhJ [H]

Synonym: Ddes_0099

Alternate gene names: 220903385

Gene position: 129690-127384 (Counterclockwise)

Preceding gene: 220903386

Following gene: 220903375

Centisome position: 4.51

GC content: 60.94

Gene sequence:

>2307_bases
ATGATTGAACTTATAAGCAATGCCGTTGTCATTGATGGAAACACCATCCGCAGCGCCGAAGAGGCCCGCGCCAAGGGCGT
GGATGTGGAGGCCGCGCGCAAAAACAGCCTGGCCGCGCGCATTCTTTCCGCGCACAATACAGCCCCGGCAGGGGAAAACG
TGCTGCGCATCCGCTTCGACGCTCTGGCCTCGCACGACATCACATATGTGGGCATTATCCAGACAGCGCGGGCCAGCGGC
CTTACGGAATTTCCCGTTCCCTACGCCCTCACCAACTGCCACAACAGCCTTTGCGCCGTAGGCGGAACCATCAACGAAGA
TGATCACCTCTTCGGTCTTGCGGCCGCCCAGAAGTACGGCGGCATCTTCGTTCCCCCGCATCTGGCGGTCATACATCAGT
ATGTACGCGAAATGATGACTAAATGTGGAGGTATGATCCTTGGTTCCGACAGCCATACCCGCTACGGCGCGCTGGGTGTC
ATGGCTGTGGGCGAAGGCGGGCCGGAACTGGTCAAACAGCTGCTCGGCAAGACCTATGACGTGGCCGACCCGCAGAAAAT
CGCCGTATGGCTCGAAGGCACGCCACGCCCCGGTGTAGGCCCGCAGGACGTGGCCCTGGCCCTTATCGCCGCTGTTTTCA
AAAACGGGTTTGTGAAAAACAAGGTGCTGGAATTTATGGGTCCCGGCGTGGAAGGCCTTTCGGTGGAATACCGTTGCGGC
ATCGATGTCATGACCACCGAAACTACCTGCCTTTCGTCCATCTGGACCACAGACGCCAAGGTGGCCCGCTACCTTGAGCA
GCACGGCCGCCCCGGCGACTACGCCGAACTGCGCCTTGAAGGCCCGGCAGCCTACGATGGTCTTATCCGCATTGATCTCG
GCAAGATCGTGCCCATGATGGCCCTGCCCTTTCACCCCAGCAATGCCTACCCCGTAGCCGAGGTTGCAAGGCATGCCCCA
GAGCTGCTGGCCCATGTGGAAGACGAGGCCCGCCGCCAGTTTGGCGATGCTGCCAGGGGCCTCAACCTTTGCGGAAAAAT
CCGCGATGGCGGCCTGTGGGTTGACCAGGGCATCATTGCGGGCTGTGCGGGCGGCAGCTTTGAAAACATCACTCTGGCCG
CCGCCATTCTGGACGGCAAAAGCACGGGCAACCTTGCCTTCAGCCTGTCCGTCTACCCTGCCAGCGAGCCGCAGGGACTG
GCTCTGGTCAACAACGGCTCCACGGCCAAACTGATGGCTGCGGGCGCAGTGATGAAAAACGCCTTCTGCGGTCCCTGTTT
CGGTGCGGGCGATACTCCGGCTCACGGTGCCCTGTCCATTCGCCACACCACCCGCAACTTCCCCAACCGCGAAGGGTCAA
AGCCTGCCAACGGGCAGCTCTCCGCCGTAGCTCTCATGGACGCCCGTTCCATCGCTGCCACGGCGGCCAACGGCGGCCGC
CTGACCCCCGCCACGGACCTGGACTGGAGCGCCCCCGGCCTTGCGGGCATCAGCCTTGATTACCGTTTTGAGCCGCTGAT
CTACCACCGTCGCGTGTATAACGGCTTTGGTCAGGCCAAGCCCGAAACACCGCTGATTTTTGGTCCCAATATTGCGGACT
GGCCCGCCATGAGCGCTCTGCCCGAACATCTGCTGCTTCAGGTCGCCAGTGTTATCACCGACCCCGTGACCACCACGGAT
GAGCTTATCCCCTCGGGCGAGACTTCATCCCTGCGTTCCAACCCGCTCAAGCTGGCAGAGTACACCCTGTCGCGCAAGGA
TCCCGGCTATGTGGAGCGAGCCAAAACCGTTAACGCCCTTGAAAAGACACGGCTGTCCAATGCCGCCGATGCGGACCTTG
TGGCCCGGGTACGCGCGCTCTTTGCCATCTGCGGTCTGAATATTCCACAAAACGGAACCGACCTTGCGGACGTGGGCATC
GGCTCCACCATCTTTGCCGTCAAACCCGGTGATGGCTCGGCCCGCGAACAGGCGGCCTCCTGCCAGAAAGTACTGGGCGG
ATGGGCCAACCTGGCCGTGGAATACGCCACAAAGCGCTACCGCTCCAACCTGATCAACTGGGGTATGCTGCCCTTCATTG
TTGATGCGGATCTTGCTGATGTGCTTCAGATTGGCGACTGGCTTGCCGTACCGCACGTACGTAAAGCCGTGCAGGAGGCC
GAACCTACCCTGCTGGCCCATATTGTGCGCGAAAACGGCACGAGCGAGCAGATTGCCCTTACCCTCAAGGATCTGACCGA
TGACGAACGCCAGATCATCCTTGATGGCTGCCTGATCAATTTCTATAACGCCACGCGGACCGCGTAG

Upstream 100 bases:

>100_bases
TTTTATTTTCATAGCCTTCGGCCTCAAACTGGCCGCGGCGCAGTCCCGCTAACCAGCGTCGCGCCAACGGCCTCAAAACC
CAGCAAAAAGGTCTGCCACC

Downstream 100 bases:

>100_bases
CCGTTGGCGGGTTAGAGCACGTTTACTTTGAAATGCCTTGTGGAGGGGACCCTATTGCAAAAGGGGTCCCCCCCTTCGCA
CCCCCGCCCCAGAACAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MIELISNAVVIDGNTIRSAEEARAKGVDVEAARKNSLAARILSAHNTAPAGENVLRIRFDALASHDITYVGIIQTARASG
LTEFPVPYALTNCHNSLCAVGGTINEDDHLFGLAAAQKYGGIFVPPHLAVIHQYVREMMTKCGGMILGSDSHTRYGALGV
MAVGEGGPELVKQLLGKTYDVADPQKIAVWLEGTPRPGVGPQDVALALIAAVFKNGFVKNKVLEFMGPGVEGLSVEYRCG
IDVMTTETTCLSSIWTTDAKVARYLEQHGRPGDYAELRLEGPAAYDGLIRIDLGKIVPMMALPFHPSNAYPVAEVARHAP
ELLAHVEDEARRQFGDAARGLNLCGKIRDGGLWVDQGIIAGCAGGSFENITLAAAILDGKSTGNLAFSLSVYPASEPQGL
ALVNNGSTAKLMAAGAVMKNAFCGPCFGAGDTPAHGALSIRHTTRNFPNREGSKPANGQLSAVALMDARSIAATAANGGR
LTPATDLDWSAPGLAGISLDYRFEPLIYHRRVYNGFGQAKPETPLIFGPNIADWPAMSALPEHLLLQVASVITDPVTTTD
ELIPSGETSSLRSNPLKLAEYTLSRKDPGYVERAKTVNALEKTRLSNAADADLVARVRALFAICGLNIPQNGTDLADVGI
GSTIFAVKPGDGSAREQAASCQKVLGGWANLAVEYATKRYRSNLINWGMLPFIVDADLADVLQIGDWLAVPHVRKAVQEA
EPTLLAHIVRENGTSEQIALTLKDLTDDERQIILDGCLINFYNATRTA

Sequences:

>Translated_768_residues
MIELISNAVVIDGNTIRSAEEARAKGVDVEAARKNSLAARILSAHNTAPAGENVLRIRFDALASHDITYVGIIQTARASG
LTEFPVPYALTNCHNSLCAVGGTINEDDHLFGLAAAQKYGGIFVPPHLAVIHQYVREMMTKCGGMILGSDSHTRYGALGV
MAVGEGGPELVKQLLGKTYDVADPQKIAVWLEGTPRPGVGPQDVALALIAAVFKNGFVKNKVLEFMGPGVEGLSVEYRCG
IDVMTTETTCLSSIWTTDAKVARYLEQHGRPGDYAELRLEGPAAYDGLIRIDLGKIVPMMALPFHPSNAYPVAEVARHAP
ELLAHVEDEARRQFGDAARGLNLCGKIRDGGLWVDQGIIAGCAGGSFENITLAAAILDGKSTGNLAFSLSVYPASEPQGL
ALVNNGSTAKLMAAGAVMKNAFCGPCFGAGDTPAHGALSIRHTTRNFPNREGSKPANGQLSAVALMDARSIAATAANGGR
LTPATDLDWSAPGLAGISLDYRFEPLIYHRRVYNGFGQAKPETPLIFGPNIADWPAMSALPEHLLLQVASVITDPVTTTD
ELIPSGETSSLRSNPLKLAEYTLSRKDPGYVERAKTVNALEKTRLSNAADADLVARVRALFAICGLNIPQNGTDLADVGI
GSTIFAVKPGDGSAREQAASCQKVLGGWANLAVEYATKRYRSNLINWGMLPFIVDADLADVLQIGDWLAVPHVRKAVQEA
EPTLLAHIVRENGTSEQIALTLKDLTDDERQIILDGCLINFYNATRTA
>Mature_768_residues
MIELISNAVVIDGNTIRSAEEARAKGVDVEAARKNSLAARILSAHNTAPAGENVLRIRFDALASHDITYVGIIQTARASG
LTEFPVPYALTNCHNSLCAVGGTINEDDHLFGLAAAQKYGGIFVPPHLAVIHQYVREMMTKCGGMILGSDSHTRYGALGV
MAVGEGGPELVKQLLGKTYDVADPQKIAVWLEGTPRPGVGPQDVALALIAAVFKNGFVKNKVLEFMGPGVEGLSVEYRCG
IDVMTTETTCLSSIWTTDAKVARYLEQHGRPGDYAELRLEGPAAYDGLIRIDLGKIVPMMALPFHPSNAYPVAEVARHAP
ELLAHVEDEARRQFGDAARGLNLCGKIRDGGLWVDQGIIAGCAGGSFENITLAAAILDGKSTGNLAFSLSVYPASEPQGL
ALVNNGSTAKLMAAGAVMKNAFCGPCFGAGDTPAHGALSIRHTTRNFPNREGSKPANGQLSAVALMDARSIAATAANGGR
LTPATDLDWSAPGLAGISLDYRFEPLIYHRRVYNGFGQAKPETPLIFGPNIADWPAMSALPEHLLLQVASVITDPVTTTD
ELIPSGETSSLRSNPLKLAEYTLSRKDPGYVERAKTVNALEKTRLSNAADADLVARVRALFAICGLNIPQNGTDLADVGI
GSTIFAVKPGDGSAREQAASCQKVLGGWANLAVEYATKRYRSNLINWGMLPFIVDADLADVLQIGDWLAVPHVRKAVQEA
EPTLLAHIVRENGTSEQIALTLKDLTDDERQIILDGCLINFYNATRTA

Specific function: Unknown

COG id: COG1048

COG function: function code C; Aconitase A

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aconitase/IPM isomerase family [H]

Homologues:

Organism=Homo sapiens, GI4501867, Length=497, Percent_Identity=25.7545271629779, Blast_Score=117, Evalue=5e-26,
Organism=Homo sapiens, GI8659555, Length=741, Percent_Identity=23.0769230769231, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI87081781, Length=765, Percent_Identity=56.7320261437908, Blast_Score=853, Evalue=0.0,
Organism=Caenorhabditis elegans, GI25149337, Length=488, Percent_Identity=26.2295081967213, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI32564738, Length=437, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17568399, Length=664, Percent_Identity=23.7951807228916, Blast_Score=81, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6323335, Length=484, Percent_Identity=25.8264462809917, Blast_Score=129, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6322261, Length=745, Percent_Identity=24.2953020134228, Blast_Score=112, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6321429, Length=607, Percent_Identity=22.7347611202636, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281365315, Length=504, Percent_Identity=25.9920634920635, Blast_Score=100, Evalue=7e-21,
Organism=Drosophila melanogaster, GI17864292, Length=504, Percent_Identity=25.9920634920635, Blast_Score=100, Evalue=7e-21,
Organism=Drosophila melanogaster, GI28571643, Length=482, Percent_Identity=24.896265560166, Blast_Score=93, Evalue=8e-19,
Organism=Drosophila melanogaster, GI161076999, Length=438, Percent_Identity=26.2557077625571, Blast_Score=86, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015931
- InterPro:   IPR015937
- InterPro:   IPR001030
- InterPro:   IPR015928
- InterPro:   IPR015932
- InterPro:   IPR015935
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00330 Aconitase; PF00694 Aconitase_C [H]

EC number: NA

Molecular weight: Translated: 81730; Mature: 81730

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELISNAVVIDGNTIRSAEEARAKGVDVEAARKNSLAARILSAHNTAPAGENVLRIRFD
CCEEECCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
ALASHDITYVGIIQTARASGLTEFPVPYALTNCHNSLCAVGGTINEDDHLFGLAAAQKYG
HHCCCCCEEEEEEEHHHHCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCEEEEHHHHHCC
GIFVPPHLAVIHQYVREMMTKCGGMILGSDSHTRYGALGVMAVGEGGPELVKQLLGKTYD
CEECCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCC
VADPQKIAVWLEGTPRPGVGPQDVALALIAAVFKNGFVKNKVLEFMGPGVEGLSVEYRCG
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEC
IDVMTTETTCLSSIWTTDAKVARYLEQHGRPGDYAELRLEGPAAYDGLIRIDLGKIVPMM
EEEEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEHHHHCHHH
ALPFHPSNAYPVAEVARHAPELLAHVEDEARRQFGDAARGLNLCGKIRDGGLWVDQGIIA
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCEEEECCEEE
GCAGGSFENITLAAAILDGKSTGNLAFSLSVYPASEPQGLALVNNGSTAKLMAAGAVMKN
ECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEECCCCEEHHHHHHHHHC
AFCGPCFGAGDTPAHGALSIRHTTRNFPNREGSKPANGQLSAVALMDARSIAATAANGGR
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHCCCCCCC
LTPATDLDWSAPGLAGISLDYRFEPLIYHRRVYNGFGQAKPETPLIFGPNIADWPAMSAL
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHH
PEHLLLQVASVITDPVTTTDELIPSGETSSLRSNPLKLAEYTLSRKDPGYVERAKTVNAL
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
EKTRLSNAADADLVARVRALFAICGLNIPQNGTDLADVGIGSTIFAVKPGDGSAREQAAS
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHH
CQKVLGGWANLAVEYATKRYRSNLINWGMLPFIVDADLADVLQIGDWLAVPHVRKAVQEA
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCHHCCHHHHHHHHHC
EPTLLAHIVRENGTSEQIALTLKDLTDDERQIILDGCLINFYNATRTA
CHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEHHEEEECHHCCCC
>Mature Secondary Structure
MIELISNAVVIDGNTIRSAEEARAKGVDVEAARKNSLAARILSAHNTAPAGENVLRIRFD
CCEEECCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
ALASHDITYVGIIQTARASGLTEFPVPYALTNCHNSLCAVGGTINEDDHLFGLAAAQKYG
HHCCCCCEEEEEEEHHHHCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCEEEEHHHHHCC
GIFVPPHLAVIHQYVREMMTKCGGMILGSDSHTRYGALGVMAVGEGGPELVKQLLGKTYD
CEECCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCC
VADPQKIAVWLEGTPRPGVGPQDVALALIAAVFKNGFVKNKVLEFMGPGVEGLSVEYRCG
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEC
IDVMTTETTCLSSIWTTDAKVARYLEQHGRPGDYAELRLEGPAAYDGLIRIDLGKIVPMM
EEEEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEHHHHCHHH
ALPFHPSNAYPVAEVARHAPELLAHVEDEARRQFGDAARGLNLCGKIRDGGLWVDQGIIA
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCEEEECCEEE
GCAGGSFENITLAAAILDGKSTGNLAFSLSVYPASEPQGLALVNNGSTAKLMAAGAVMKN
ECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEECCCCEEHHHHHHHHHC
AFCGPCFGAGDTPAHGALSIRHTTRNFPNREGSKPANGQLSAVALMDARSIAATAANGGR
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHCCCCCCC
LTPATDLDWSAPGLAGISLDYRFEPLIYHRRVYNGFGQAKPETPLIFGPNIADWPAMSAL
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHH
PEHLLLQVASVITDPVTTTDELIPSGETSSLRSNPLKLAEYTLSRKDPGYVERAKTVNAL
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
EKTRLSNAADADLVARVRALFAICGLNIPQNGTDLADVGIGSTIFAVKPGDGSAREQAAS
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHH
CQKVLGGWANLAVEYATKRYRSNLINWGMLPFIVDADLADVLQIGDWLAVPHVRKAVQEA
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCHHCCHHHHHHHHHC
EPTLLAHIVRENGTSEQIALTLKDLTDDERQIILDGCLINFYNATRTA
CHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEHHEEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]