| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903375
Identifier: 220903375
GI number: 220903375
Start: 116616
End: 117569
Strand: Reverse
Name: 220903375
Synonym: Ddes_0089
Alternate gene names: NA
Gene position: 117569-116616 (Counterclockwise)
Preceding gene: 220903385
Following gene: 220903374
Centisome position: 4.09
GC content: 60.69
Gene sequence:
>954_bases ATGTATTTTCCCACTGCCGGCATCGAGTGCAACCCCTTCATCCCTTTTGGTGCAGCCCTTTGCATTTCGTTTTTTACCTC TATGGGCGGCATCTCCGGGGCGTTCTTGCTGCTGCCTTTTCATATGAGCGTACTGGGCTATGTGAACCCCAGCGTCAGCG CCACCAACCAGTTTTTCAACATCCTGGCCTGCCCGCCCGGCGTCTGGCGCTACTGGCGCGAAGGGCGGCTCATATGGCCG CTGGCGCTTACGGTAGCGGCCGGAACACTGCCCGGGGTATTTCTGGGGGCGCTCATCCGTGTCAACTGGCTGCCGGACCC GGACAAATTCAAGATTTTTGCAGGCCTTGTACTGCTGTACGTGGGCGGACGCATGGCCCGCGCCGTCTGGAAGGGTCGCC AGGCTGAAAGCCCGGGCATGAAGCTGCACGGCGCCCCGGGCACGTCCGACGCAGCAGTGGCCGGCAAGGACGACAGGTGC GCGGGGCCTGACGCGCCGGCAAACTGCTGTCGCGTTCTGGAATGGAATACCCGCAGCCTGTCATTTGCCTTTCAGGAGAA AAAACATGTGGTCTCCACCCCCAGGCTGGCCCTGCTGAGCCTTGTTGTGGGGCTTATCGGCGGTGTTTACGGCATTGGCG GCGGGGCTATCATGGCGCCTTTTCTGGTTTCTTTTTTCGCGCTTCCGGTTTATGCCGTGGCCGGGGCCACCCTTTTTGCC ACCTTTCTTACTTCGGTGGCGGGCGTAAGCTTTTATTCGCTGCTGGCCCCCCTGTACCCCGGCATGGCCATTGCTCCTGA CTGGAGAATGGGCATACTGGTGGGCCTGGGCGGCATGTGCGGCATGTATCTTGGCGCACGCTGCCAGAAGCATGTGCCGG CCACGGCGCTCAAGTGCCTGCTGGCCGTCATTTTGCTCTTTACAGCCCTGCGTTATCTGGGCCAATCTTTTTAG
Upstream 100 bases:
>100_bases TATTCACGATTATTATAAAAACCGTGAACATTATATATCATATCTGGCTATTTTTACTTGCTGTTTTATAACAGTGTTCT GACAAACTGCGGAGGCCGTC
Downstream 100 bases:
>100_bases CGGCCGCGCACCCTGTTCATGCGCGGCCATTACAAAGGACGCAGCATGAATCAAAGCTCGCGGCTGCCTGTCGGCCTTTT TGACTCCGGCATGGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MYFPTAGIECNPFIPFGAALCISFFTSMGGISGAFLLLPFHMSVLGYVNPSVSATNQFFNILACPPGVWRYWREGRLIWP LALTVAAGTLPGVFLGALIRVNWLPDPDKFKIFAGLVLLYVGGRMARAVWKGRQAESPGMKLHGAPGTSDAAVAGKDDRC AGPDAPANCCRVLEWNTRSLSFAFQEKKHVVSTPRLALLSLVVGLIGGVYGIGGGAIMAPFLVSFFALPVYAVAGATLFA TFLTSVAGVSFYSLLAPLYPGMAIAPDWRMGILVGLGGMCGMYLGARCQKHVPATALKCLLAVILLFTALRYLGQSF
Sequences:
>Translated_317_residues MYFPTAGIECNPFIPFGAALCISFFTSMGGISGAFLLLPFHMSVLGYVNPSVSATNQFFNILACPPGVWRYWREGRLIWP LALTVAAGTLPGVFLGALIRVNWLPDPDKFKIFAGLVLLYVGGRMARAVWKGRQAESPGMKLHGAPGTSDAAVAGKDDRC AGPDAPANCCRVLEWNTRSLSFAFQEKKHVVSTPRLALLSLVVGLIGGVYGIGGGAIMAPFLVSFFALPVYAVAGATLFA TFLTSVAGVSFYSLLAPLYPGMAIAPDWRMGILVGLGGMCGMYLGARCQKHVPATALKCLLAVILLFTALRYLGQSF >Mature_317_residues MYFPTAGIECNPFIPFGAALCISFFTSMGGISGAFLLLPFHMSVLGYVNPSVSATNQFFNILACPPGVWRYWREGRLIWP LALTVAAGTLPGVFLGALIRVNWLPDPDKFKIFAGLVLLYVGGRMARAVWKGRQAESPGMKLHGAPGTSDAAVAGKDDRC AGPDAPANCCRVLEWNTRSLSFAFQEKKHVVSTPRLALLSLVVGLIGGVYGIGGGAIMAPFLVSFFALPVYAVAGATLFA TFLTSVAGVSFYSLLAPLYPGMAIAPDWRMGILVGLGGMCGMYLGARCQKHVPATALKCLLAVILLFTALRYLGQSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33727; Mature: 33727
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFPTAGIECNPFIPFGAALCISFFTSMGGISGAFLLLPFHMSVLGYVNPSVSATNQFFN CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH ILACPPGVWRYWREGRLIWPLALTVAAGTLPGVFLGALIRVNWLPDPDKFKIFAGLVLLY HHCCCHHHHHHHHCCCEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VGGRMARAVWKGRQAESPGMKLHGAPGTSDAAVAGKDDRCAGPDAPANCCRVLEWNTRSL HCCHHHHHHHCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCHH SFAFQEKKHVVSTPRLALLSLVVGLIGGVYGIGGGAIMAPFLVSFFALPVYAVAGATLFA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TFLTSVAGVSFYSLLAPLYPGMAIAPDWRMGILVGLGGMCGMYLGARCQKHVPATALKCL HHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LAVILLFTALRYLGQSF HHHHHHHHHHHHHCCCC >Mature Secondary Structure MYFPTAGIECNPFIPFGAALCISFFTSMGGISGAFLLLPFHMSVLGYVNPSVSATNQFFN CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH ILACPPGVWRYWREGRLIWPLALTVAAGTLPGVFLGALIRVNWLPDPDKFKIFAGLVLLY HHCCCHHHHHHHHCCCEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VGGRMARAVWKGRQAESPGMKLHGAPGTSDAAVAGKDDRCAGPDAPANCCRVLEWNTRSL HCCHHHHHHHCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCHH SFAFQEKKHVVSTPRLALLSLVVGLIGGVYGIGGGAIMAPFLVSFFALPVYAVAGATLFA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TFLTSVAGVSFYSLLAPLYPGMAIAPDWRMGILVGLGGMCGMYLGARCQKHVPATALKCL HHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LAVILLFTALRYLGQSF HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA