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The map label for this gene is napC [C]

Identifier: 220903368

GI number: 220903368

Start: 106462

End: 106929

Strand: Reverse

Name: napC [C]

Synonym: Ddes_0082

Alternate gene names: 220903368

Gene position: 106929-106462 (Counterclockwise)

Preceding gene: 220903372

Following gene: 220903367

Centisome position: 3.72

GC content: 58.12

Gene sequence:

>468_bases
ATGGGTACACCCCGCAATGGACCCTGGCTGAAGTGGCTGTTGGGAGGCGTTGCGGCGGGCGTGGTACTAATGGGAGTTCT
GGCCTATGCCATGACAACCACTGACCAACGGCCGTTTTGCGCCAGTTGTCATATCATGCAGGAGGCTGCCGTGACCCAGA
AAATGGGAACGCACGCCAACCTTGCCTGTAATGACTGCCATGCCCCGCACAATCTTTTGGTCAAGCTGCCGTTCAAGGCG
CAGGAAGGCCTGCGCGACGTGGTGGGCAATATTATGGGACACGACATTCCGCGTCCCCTGAGCCTGCGCACCCGAGACGT
GGTGAACGCGAACTGCAAGGCATGCCATACCCAGACCAACATCAACGTGGCCAGCATGGATGCCAAGCCTTATTGTGTGG
ACTGCCACAAGGGCGTGGCCCACATGCGCATGAAGCCCATCAGCACAAGGACGGTAGCCTATGAATAA

Upstream 100 bases:

>100_bases
GCGGCCACGAGCGGCTGCCTGCGCCCCACCCGGGCGAAATCCGGCCCTGAAGAGCGGTCTTCAGGGCGCATCTGCACTAG
GAGCGAGCGAAGGAGGCTCT

Downstream 100 bases:

>100_bases
GCGAATTGTGACCACGGCCCTGGCGTTGGCCACGCTGCTGGGCGTAGCTTTGCTCAGCGGCTGTCAGGATGTTTCCACAG
AGCTGAAGGCCCCCAAGTAC

Product: NapC/NirT cytochrome c family protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: Cytochrome C Nitrite Reductase Small Subunit; Cytochrome C Nitrite Reductase Small Subunit NrfH; NapC/NirT Cytochrome C Domain-Containing Protein; NapC/NirT Cytochrome C Domain Protein

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MGTPRNGPWLKWLLGGVAAGVVLMGVLAYAMTTTDQRPFCASCHIMQEAAVTQKMGTHANLACNDCHAPHNLLVKLPFKA
QEGLRDVVGNIMGHDIPRPLSLRTRDVVNANCKACHTQTNINVASMDAKPYCVDCHKGVAHMRMKPISTRTVAYE

Sequences:

>Translated_155_residues
MGTPRNGPWLKWLLGGVAAGVVLMGVLAYAMTTTDQRPFCASCHIMQEAAVTQKMGTHANLACNDCHAPHNLLVKLPFKA
QEGLRDVVGNIMGHDIPRPLSLRTRDVVNANCKACHTQTNINVASMDAKPYCVDCHKGVAHMRMKPISTRTVAYE
>Mature_154_residues
GTPRNGPWLKWLLGGVAAGVVLMGVLAYAMTTTDQRPFCASCHIMQEAAVTQKMGTHANLACNDCHAPHNLLVKLPFKAQ
EGLRDVVGNIMGHDIPRPLSLRTRDVVNANCKACHTQTNINVASMDAKPYCVDCHKGVAHMRMKPISTRTVAYE

Specific function: Mediates Electron Flow From Quinones To The Napab Complex. [C]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Membrane-Anchored. Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=160, Percent_Identity=27.5, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16895; Mature: 16764

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTPRNGPWLKWLLGGVAAGVVLMGVLAYAMTTTDQRPFCASCHIMQEAAVTQKMGTHAN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
LACNDCHAPHNLLVKLPFKAQEGLRDVVGNIMGHDIPRPLSLRTRDVVNANCKACHTQTN
CEECCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEECCCC
INVASMDAKPYCVDCHKGVAHMRMKPISTRTVAYE
CEEEEECCCCEEEECCCCHHHHCCCCCCCEEEECC
>Mature Secondary Structure 
GTPRNGPWLKWLLGGVAAGVVLMGVLAYAMTTTDQRPFCASCHIMQEAAVTQKMGTHAN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
LACNDCHAPHNLLVKLPFKAQEGLRDVVGNIMGHDIPRPLSLRTRDVVNANCKACHTQTN
CEECCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCEEECCCC
INVASMDAKPYCVDCHKGVAHMRMKPISTRTVAYE
CEEEEECCCCEEEECCCCHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA