| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ahcY [H]
Identifier: 220903325
GI number: 220903325
Start: 49852
End: 51273
Strand: Reverse
Name: ahcY [H]
Synonym: Ddes_0039
Alternate gene names: 220903325
Gene position: 51273-49852 (Counterclockwise)
Preceding gene: 220903326
Following gene: 220903324
Centisome position: 1.78
GC content: 58.02
Gene sequence:
>1422_bases ATGACCAAAGCTCTTGATCTGAGCCTGGCGCACAAAGTTGCGGATATGGCCCTGGCCGACTTCGGCAAAAAAGAAATGCA GCTTTCCGAGCGGGAAGTGCCCGGTCTTATGGAGTGCATCAAAAAATACGGCTCCAGCCAGCCCCTCAAGGGGCTCAAGA TTACCGGCTCGCTGCACATGACCATCCAGACGGCCATGCTTATTCAGACCCTGCACGCCCTGGGCGCGGATCTTCGCTGG GCTTCATGCAATATCTTTTCCACTCAGGACCACGCCGCCGCCGCCATTGCCGACCTGGGCATGGCGAAGGTTTTTGCCTG GAAAGGCGAAACCCTTGAAGATTACTGGTGGTGCACCGAAATGGCCCTTACCTGGCCCGACGGCTCCGGTCCCGACCTTA TCGTGGACGACGGCGGCGATGCCACCCTGCTCATCCACAAGGGTGTGGAAGCTGAAAACAATCCCGCCATCCTTGACGAA AAGACCGATAACAAGGAACTTCAGTGCATCCTTGACCGCCTCAAACTGCGCCTCAAGGAAGACCCGCAGCACTGGCACAA GGTTGCCGCCGGCATGAAGGGCGTGTCGGAAGAAACCACCACTGGCGTACACCGCCTTTACCAGCTTGAGGCCGCGGGCA AACTGCTTTTCCCGGCCATCAACGTCAACGATGCGGTGACCAAGTCCAAATTCGACAACCTGTACGGCTGCCGCGAATCG CTGGCAGACGGCATCAAGCGTGCCACTGACGTCATGATCGCCGGCAAGGTGGTTGTGGTGATCGGCTACGGCGACGTGGG CAAAGGCTGCGCCCAGTCCATGCGCGGCCTCGGCGCGCGCGTTCTGGTGACCGAGATCGACCCCATCTGCGCACTTCAGG CCGCCATGGAAGGCTACGAAGTCACCACGGTTGAAGACGCCCTGCCCTACGGTGACATTTATGTGACCTGCACGGGCAAC TATCATGTCATCAGCGGCAAACATATGGAAGGCATGAAAGACGAAGCCATCGTGTGCAATATCGGCCACTTCGATAACGA AATCGAAATGACCTATCTGGAAAACACGCCCGGCATCACCTGCCTGAACATCAAGCCGCAGGTGGACAAGTGGACCCTCA AGTCCGGCCGCAGCATCATTGTGCTGGCCGAAGGCCGCCTGGTAAACCTTGGCTGCGCCACAGGCCACGCCAGCTTTGTC ATGTCCAACAGCTTTACCAACCAGACACTGGCCCAGATCAAGCTGGCCACTGAAAAGCTGGAAAACAAGGTCTACACCCT GCCCAAGGAGCTGGACGAAGAAGTGGCCCGTCTGCATCTTGGCCGCCTCGGCGCAAAACTGACCAAACTTTCCAGGGAAC AGGCCGACTATATCGGCGTTAACGTGGACGGTCCCTACAAGTCGGACCACTACCGCTACTAG
Upstream 100 bases:
>100_bases GCCGCAAGGCCGCGGGGTTTTCCGGGCAGCAGAAGCATGCCCGGCGCGCATCCGGACACAATGCAAACAAACATACCATG TCAAAGGATAGGAGAAACAC
Downstream 100 bases:
>100_bases AACATACCCACTCTGAAATGCCTGCCTGACGGCGAGACACTTCTGCTGTCTGCGTCCGCACCCTGATGCACCGTAACGGC GGGATCAGGTCCGTCTTGCA
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTKALDLSLAHKVADMALADFGKKEMQLSEREVPGLMECIKKYGSSQPLKGLKITGSLHMTIQTAMLIQTLHALGADLRW ASCNIFSTQDHAAAAIADLGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLIVDDGGDATLLIHKGVEAENNPAILDE KTDNKELQCILDRLKLRLKEDPQHWHKVAAGMKGVSEETTTGVHRLYQLEAAGKLLFPAINVNDAVTKSKFDNLYGCRES LADGIKRATDVMIAGKVVVVIGYGDVGKGCAQSMRGLGARVLVTEIDPICALQAAMEGYEVTTVEDALPYGDIYVTCTGN YHVISGKHMEGMKDEAIVCNIGHFDNEIEMTYLENTPGITCLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATGHASFV MSNSFTNQTLAQIKLATEKLENKVYTLPKELDEEVARLHLGRLGAKLTKLSREQADYIGVNVDGPYKSDHYRY
Sequences:
>Translated_473_residues MTKALDLSLAHKVADMALADFGKKEMQLSEREVPGLMECIKKYGSSQPLKGLKITGSLHMTIQTAMLIQTLHALGADLRW ASCNIFSTQDHAAAAIADLGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLIVDDGGDATLLIHKGVEAENNPAILDE KTDNKELQCILDRLKLRLKEDPQHWHKVAAGMKGVSEETTTGVHRLYQLEAAGKLLFPAINVNDAVTKSKFDNLYGCRES LADGIKRATDVMIAGKVVVVIGYGDVGKGCAQSMRGLGARVLVTEIDPICALQAAMEGYEVTTVEDALPYGDIYVTCTGN YHVISGKHMEGMKDEAIVCNIGHFDNEIEMTYLENTPGITCLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATGHASFV MSNSFTNQTLAQIKLATEKLENKVYTLPKELDEEVARLHLGRLGAKLTKLSREQADYIGVNVDGPYKSDHYRY >Mature_472_residues TKALDLSLAHKVADMALADFGKKEMQLSEREVPGLMECIKKYGSSQPLKGLKITGSLHMTIQTAMLIQTLHALGADLRWA SCNIFSTQDHAAAAIADLGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLIVDDGGDATLLIHKGVEAENNPAILDEK TDNKELQCILDRLKLRLKEDPQHWHKVAAGMKGVSEETTTGVHRLYQLEAAGKLLFPAINVNDAVTKSKFDNLYGCRESL ADGIKRATDVMIAGKVVVVIGYGDVGKGCAQSMRGLGARVLVTEIDPICALQAAMEGYEVTTVEDALPYGDIYVTCTGNY HVISGKHMEGMKDEAIVCNIGHFDNEIEMTYLENTPGITCLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATGHASFVM SNSFTNQTLAQIKLATEKLENKVYTLPKELDEEVARLHLGRLGAKLTKLSREQADYIGVNVDGPYKSDHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=467, Percent_Identity=58.6723768736617, Blast_Score=525, Evalue=1e-149, Organism=Homo sapiens, GI239937451, Length=443, Percent_Identity=59.3679458239278, Blast_Score=503, Evalue=1e-142, Organism=Homo sapiens, GI24308043, Length=464, Percent_Identity=46.3362068965517, Blast_Score=415, Evalue=1e-116, Organism=Homo sapiens, GI298286489, Length=464, Percent_Identity=46.3362068965517, Blast_Score=414, Evalue=1e-116, Organism=Homo sapiens, GI195539337, Length=464, Percent_Identity=46.3362068965517, Blast_Score=414, Evalue=1e-116, Organism=Homo sapiens, GI195539349, Length=464, Percent_Identity=46.3362068965517, Blast_Score=414, Evalue=1e-115, Organism=Homo sapiens, GI21361647, Length=464, Percent_Identity=45.2586206896552, Blast_Score=398, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17506425, Length=469, Percent_Identity=60.1279317697228, Blast_Score=544, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6320882, Length=480, Percent_Identity=57.2916666666667, Blast_Score=518, Evalue=1e-148, Organism=Drosophila melanogaster, GI24642172, Length=466, Percent_Identity=58.7982832618026, Blast_Score=525, Evalue=1e-149, Organism=Drosophila melanogaster, GI24656245, Length=456, Percent_Identity=47.3684210526316, Blast_Score=412, Evalue=1e-115, Organism=Drosophila melanogaster, GI45553387, Length=463, Percent_Identity=46.2203023758099, Blast_Score=397, Evalue=1e-110, Organism=Drosophila melanogaster, GI45553385, Length=462, Percent_Identity=46.1038961038961, Blast_Score=394, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51867; Mature: 51736
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKALDLSLAHKVADMALADFGKKEMQLSEREVPGLMECIKKYGSSQPLKGLKITGSLHM CCCEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECEEEE TIQTAMLIQTLHALGADLRWASCNIFSTQDHAAAAIADLGMAKVFAWKGETLEDYWWCTE HHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCHHEEEEECCCCHHHHEEEEE MALTWPDGSGPDLIVDDGGDATLLIHKGVEAENNPAILDEKTDNKELQCILDRLKLRLKE EEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCC DPQHWHKVAAGMKGVSEETTTGVHRLYQLEAAGKLLFPAINVNDAVTKSKFDNLYGCRES CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH LADGIKRATDVMIAGKVVVVIGYGDVGKGCAQSMRGLGARVLVTEIDPICALQAAMEGYE HHHHHHHHHHEEEECEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCE VTTVEDALPYGDIYVTCTGNYHVISGKHMEGMKDEAIVCNIGHFDNEIEMTYLENTPGIT EEEHHHCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCEE CLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATGHASFVMSNSFTNQTLAQIKLATEKL EEECCCCCCCEECCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH ENKVYTLPKELDEEVARLHLGRLGAKLTKLSREQADYIGVNVDGPYKSDHYRY CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure TKALDLSLAHKVADMALADFGKKEMQLSEREVPGLMECIKKYGSSQPLKGLKITGSLHM CCEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECEEEE TIQTAMLIQTLHALGADLRWASCNIFSTQDHAAAAIADLGMAKVFAWKGETLEDYWWCTE HHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCHHEEEEECCCCHHHHEEEEE MALTWPDGSGPDLIVDDGGDATLLIHKGVEAENNPAILDEKTDNKELQCILDRLKLRLKE EEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCC DPQHWHKVAAGMKGVSEETTTGVHRLYQLEAAGKLLFPAINVNDAVTKSKFDNLYGCRES CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH LADGIKRATDVMIAGKVVVVIGYGDVGKGCAQSMRGLGARVLVTEIDPICALQAAMEGYE HHHHHHHHHHEEEECEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCE VTTVEDALPYGDIYVTCTGNYHVISGKHMEGMKDEAIVCNIGHFDNEIEMTYLENTPGIT EEEHHHCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCEE CLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATGHASFVMSNSFTNQTLAQIKLATEKL EEECCCCCCCEECCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH ENKVYTLPKELDEEVARLHLGRLGAKLTKLSREQADYIGVNVDGPYKSDHYRY CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA