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The map label for this gene is dcrA [H]

Identifier: 220903324

GI number: 220903324

Start: 47279

End: 49024

Strand: Reverse

Name: dcrA [H]

Synonym: Ddes_0038

Alternate gene names: 220903324

Gene position: 49024-47279 (Counterclockwise)

Preceding gene: 220903325

Following gene: 220903323

Centisome position: 1.71

GC content: 57.9

Gene sequence:

>1746_bases
ATGAAGCTCGGAGTAAAACTTTCTCTGATGTCTGCATTTCTACTGCTGCTCACTGCAATTCTTGGTACGTTCAGTCTCAT
GCAGATGTCAAAAATCAATGACGGTTCAACAGAGCTGAGCTACGAATGGCTGCCATCAACACGTTGTGCCATGGATTTCA
ATATCATCGCCTCTGATTACCGGCTGGCCGAAGCCCTGTTCATCACAACACCCCCCACGGATGAATACCGGCAGGTATAC
AAAACCCGCATGGAAAGCACCCAGAAAAGCCTTTCTGCGGTTGCCGCACGGTACATGCCCCTTATCGGCTCAGCGCAGGA
GCGCCAGGCATATGAAACCTTTGCGCGGCAATGGAAGGAATATTCGGACCTCAGCGGCCGCATCATGCAACTGGCCGACA
GCGGCAATCTGGATCAGGCCCTGCAGCTTTTCCGTGTACAGTCCCGCACGCTTTATGAGCAGGGGCGTGAATCCCTCGCG
ACACTGGTGCGCATCAATACCGAAGGCGGCAATGCGGCCAGCAAGGAATGCGATGACCTGTACGCCACGTCAAAAAAACT
GATTATTATCCTGCTTGCGGCCGCACTTATCGCCGGCACGCTTACCGTGGTCTTCATCATACGGAGCACACACAAACAGC
TGGGCAAAGACCCGGGCGAACTTAACAGCATTGCCGACCGCGTTGTGCAGGGCGACTATAATGTGGACGATGGAAACGCC
AAAGAAGGCGTATACAAGGCCATTGTAGCCATGGTCAGCGCCCTGAAGTCAAACATCGAACGGGCGCAGGAAGAATCGAT
CAGGGCGCAGGATGCCGCTGAAAAGGCCGGGATAGCACAGCATGCCGCTGAAGAAGCCCAGGCCAGGGCAGAAAACGCCC
GCCGCGAAGGTCTGCTTGACGCCGCAGCCCAGCTTGAGGGCGTGGTCAACATCATTGCCTCCGCCTCTGAGGAGCTTTCG
GCCCAGATCGAGCAGTCTTCTCACGGCGCGGCACAGCAGGCAGGCCGCATTGCAGACACGGCCACCGCAGTGGAAGAAAT
GAATGTCACCGTGCTTGAGGTCGCCAGAAACGCCTCGTCCGGAGCGGACCTTTCCGGCGCTACACAACAGAAAGCCCGTG
AAGGCGAACAGATAACCTCCCAGTGCCAGACCGCCATCAGCGATGTGCAAAACGACACTATGGCGCTTAAAGCCGGCATG
GACGAGCTTTCTGGACATGCGCAAGCCATCAACGAAATCATGACTGTCATCTCCGACATCGCGGACCAGACAAACCTGCT
GGCCCTCAATGCGGCCATTGAAGCGGCCAGAGCAGGAGATGCCGGGCGCGGCTTTGCCGTGGTGGCCGATGAAGTGCGCA
AACTGGCCGAAAAAACCATGGCCTCCACCCAGGATGTGGGCAGGGCCATCCGCGCCATCCAGGAAAGCTCCCGGGATGGG
GTGCATCGTATGGATGCCGCGGTGGACAAGGTAAACCTGGCTACGGAATTCTCCCTGCGCAGCGGAGACGCACTGAAGGA
AATCCTCGGTCTGGCCGAACAGACGGCTGACCAGGTACGCAGCATCGCCACGGCCAGCGAGCAGCAGTCTGCCTCATCTG
AAGAAATCGCCCGCTCTGTGGAACACGTCAACACCATTGCCGGTGAAACCGCCCAGGCCATGGGCGAAGCCAGCAAGGCC
GTTTCCGACCTGGCAGCCCAGGCCCAGGAGCTGGCGAGGATAATCGAATCTCTCAAGCGGGCCTGA

Upstream 100 bases:

>100_bases
ATAAAAAAGAATATTGCATGGGAAAATAAAATTATACTATTCTTTTTTATACAAAACATAAAACAAAAACAGCCAATCGT
CACATTACTTGGGGGAATAA

Downstream 100 bases:

>100_bases
TTCGCCTGCCGCACTGCCCCCAAACAGCCCGGCCTTTTCCTGTACAGGAAAAGGCCGGTTTTTCGTGCTGCGGATGCCGT
GCAGGCGCATTGCCCCCCGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MKLGVKLSLMSAFLLLLTAILGTFSLMQMSKINDGSTELSYEWLPSTRCAMDFNIIASDYRLAEALFITTPPTDEYRQVY
KTRMESTQKSLSAVAARYMPLIGSAQERQAYETFARQWKEYSDLSGRIMQLADSGNLDQALQLFRVQSRTLYEQGRESLA
TLVRINTEGGNAASKECDDLYATSKKLIIILLAAALIAGTLTVVFIIRSTHKQLGKDPGELNSIADRVVQGDYNVDDGNA
KEGVYKAIVAMVSALKSNIERAQEESIRAQDAAEKAGIAQHAAEEAQARAENARREGLLDAAAQLEGVVNIIASASEELS
AQIEQSSHGAAQQAGRIADTATAVEEMNVTVLEVARNASSGADLSGATQQKAREGEQITSQCQTAISDVQNDTMALKAGM
DELSGHAQAINEIMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMASTQDVGRAIRAIQESSRDG
VHRMDAAVDKVNLATEFSLRSGDALKEILGLAEQTADQVRSIATASEQQSASSEEIARSVEHVNTIAGETAQAMGEASKA
VSDLAAQAQELARIIESLKRA

Sequences:

>Translated_581_residues
MKLGVKLSLMSAFLLLLTAILGTFSLMQMSKINDGSTELSYEWLPSTRCAMDFNIIASDYRLAEALFITTPPTDEYRQVY
KTRMESTQKSLSAVAARYMPLIGSAQERQAYETFARQWKEYSDLSGRIMQLADSGNLDQALQLFRVQSRTLYEQGRESLA
TLVRINTEGGNAASKECDDLYATSKKLIIILLAAALIAGTLTVVFIIRSTHKQLGKDPGELNSIADRVVQGDYNVDDGNA
KEGVYKAIVAMVSALKSNIERAQEESIRAQDAAEKAGIAQHAAEEAQARAENARREGLLDAAAQLEGVVNIIASASEELS
AQIEQSSHGAAQQAGRIADTATAVEEMNVTVLEVARNASSGADLSGATQQKAREGEQITSQCQTAISDVQNDTMALKAGM
DELSGHAQAINEIMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMASTQDVGRAIRAIQESSRDG
VHRMDAAVDKVNLATEFSLRSGDALKEILGLAEQTADQVRSIATASEQQSASSEEIARSVEHVNTIAGETAQAMGEASKA
VSDLAAQAQELARIIESLKRA
>Mature_581_residues
MKLGVKLSLMSAFLLLLTAILGTFSLMQMSKINDGSTELSYEWLPSTRCAMDFNIIASDYRLAEALFITTPPTDEYRQVY
KTRMESTQKSLSAVAARYMPLIGSAQERQAYETFARQWKEYSDLSGRIMQLADSGNLDQALQLFRVQSRTLYEQGRESLA
TLVRINTEGGNAASKECDDLYATSKKLIIILLAAALIAGTLTVVFIIRSTHKQLGKDPGELNSIADRVVQGDYNVDDGNA
KEGVYKAIVAMVSALKSNIERAQEESIRAQDAAEKAGIAQHAAEEAQARAENARREGLLDAAAQLEGVVNIIASASEELS
AQIEQSSHGAAQQAGRIADTATAVEEMNVTVLEVARNASSGADLSGATQQKAREGEQITSQCQTAISDVQNDTMALKAGM
DELSGHAQAINEIMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMASTQDVGRAIRAIQESSRDG
VHRMDAAVDKVNLATEFSLRSGDALKEILGLAEQTADQVRSIATASEQQSASSEEIARSVEHVNTIAGETAQAMGEASKA
VSDLAAQAQELARIIESLKRA

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=266, Percent_Identity=32.7067669172932, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI2367378, Length=236, Percent_Identity=32.6271186440678, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=31.6666666666667, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787690, Length=268, Percent_Identity=30.5970149253731, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1789453, Length=261, Percent_Identity=27.9693486590038, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 62271; Mature: 62271

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGVKLSLMSAFLLLLTAILGTFSLMQMSKINDGSTELSYEWLPSTRCAMDFNIIASDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHEEHHHHHHHH
RLAEALFITTPPTDEYRQVYKTRMESTQKSLSAVAARYMPLIGSAQERQAYETFARQWKE
HHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YSDLSGRIMQLADSGNLDQALQLFRVQSRTLYEQGRESLATLVRINTEGGNAASKECDDL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH
YATSKKLIIILLAAALIAGTLTVVFIIRSTHKQLGKDPGELNSIADRVVQGDYNVDDGNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
KEGVYKAIVAMVSALKSNIERAQEESIRAQDAAEKAGIAQHAAEEAQARAENARREGLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAQLEGVVNIIASASEELSAQIEQSSHGAAQQAGRIADTATAVEEMNVTVLEVARNASS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCC
GADLSGATQQKAREGEQITSQCQTAISDVQNDTMALKAGMDELSGHAQAINEIMTVISDI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMASTQDVGRAIRAIQESSRDG
HCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VHRMDAAVDKVNLATEFSLRSGDALKEILGLAEQTADQVRSIATASEQQSASSEEIARSV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EHVNTIAGETAQAMGEASKAVSDLAAQAQELARIIESLKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLGVKLSLMSAFLLLLTAILGTFSLMQMSKINDGSTELSYEWLPSTRCAMDFNIIASDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHEEHHHHHHHH
RLAEALFITTPPTDEYRQVYKTRMESTQKSLSAVAARYMPLIGSAQERQAYETFARQWKE
HHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YSDLSGRIMQLADSGNLDQALQLFRVQSRTLYEQGRESLATLVRINTEGGNAASKECDDL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH
YATSKKLIIILLAAALIAGTLTVVFIIRSTHKQLGKDPGELNSIADRVVQGDYNVDDGNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
KEGVYKAIVAMVSALKSNIERAQEESIRAQDAAEKAGIAQHAAEEAQARAENARREGLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAQLEGVVNIIASASEELSAQIEQSSHGAAQQAGRIADTATAVEEMNVTVLEVARNASS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCC
GADLSGATQQKAREGEQITSQCQTAISDVQNDTMALKAGMDELSGHAQAINEIMTVISDI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMASTQDVGRAIRAIQESSRDG
HCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VHRMDAAVDKVNLATEFSLRSGDALKEILGLAEQTADQVRSIATASEQQSASSEEIARSV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EHVNTIAGETAQAMGEASKAVSDLAAQAQELARIIESLKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]