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The map label for this gene is parB [H]

Identifier: 220903301

GI number: 220903301

Start: 21378

End: 22292

Strand: Reverse

Name: parB [H]

Synonym: Ddes_0015

Alternate gene names: 220903301

Gene position: 22292-21378 (Counterclockwise)

Preceding gene: 220903303

Following gene: 220903288

Centisome position: 0.78

GC content: 60.66

Gene sequence:

>915_bases
ATGAGCGGCAACAAGAAGGGATTGGGAAGAGGTCTGGACGCGCTTTTTGGCGGTTCTGAACCCAAACGTGAACAGGAAGC
GGCAAGCAGCAGCCTGCCCGTTTCTTCTTTGCGCCCCAACCCGGGTCAGCCCCGCAGACACTTTGACGAGGTCGCCCTGC
GCGAACTGGCGGCCTCCATCAAGGCTCAGGGTATTATCCAGCCCCTGCTGGTACGCCCCCTCGCAGGAGGCGAAACCTAC
CAGATAGTGGCCGGCGAGCGCCGCTGGCGTGCCGCGCAGATGGCCGGTCTTGACAATGTACCTGTATATATTCGTGAATT
GAGCGATAAAGAGGTTATGGCCGCCGCGCTTATTGAAAACCTGCAGCGCGAAGATCTCAACCCCATTGAAGAAGCCGAGG
CCCTTCAGGCCCTGCGCGAGGCCCTGGACCTGACGCAGGAAGAACTGGCGGCACGTCTTGGCAAAAGCCGCCCGGCCGTT
GCCAACGCATTGCGCCTATTGCAGTTAAGCGCCGCCGCGCGGGAAGACCTTCAGACCGGGCGTATCAGCGCCGGACATGC
CCGCTGCCTTCTTGGCATTGACGAGCCTGCCGCTGCCGAAGCCCTGCGCCTGCGCATACAAAGCCACGGCATGACCGTGC
GCGAGGCTGAAGACGCCGCGGCCTTCTGGCGCGGCAACTCTGCCCTCCCCTGGCTGGAAGAGGAAAAGCAGGACCGCAAG
CCCGCGCCGCAAAAAATTTCACGCAAGAAAAGCCCGGCATTCAAGGTACTGCAAAAAGACCTGAGCAGCGCCCTGGGCTG
CGCTGCCAAAATAAGCGGCGACGAAAACGGCGGGCGCATTTCATTGAATTACGCTAACAAGCAGGAGCTGGACGCATTGC
TGGAAAAATTTGGCGTGGCTCTTGAGGGGCAATAG

Upstream 100 bases:

>100_bases
CGGCCTTGTCAAGGCTCACGGCCGGGCAAAGCACTTTTCATGATGAAACAGCAACTGAAAGCGCCCGCATCCGGGCGCGA
GAACATATGAGGTGATACAT

Downstream 100 bases:

>100_bases
CGCAAACGCACTTTGAACTGGCGCTGTCTCCCCACACGCTGGTGGCATTACAAGAATATGCACAGCTTGCCCGGACACTA
TTTTACGGCTTATCTGGCCT

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSGNKKGLGRGLDALFGGSEPKREQEAASSSLPVSSLRPNPGQPRRHFDEVALRELAASIKAQGIIQPLLVRPLAGGETY
QIVAGERRWRAAQMAGLDNVPVYIRELSDKEVMAAALIENLQREDLNPIEEAEALQALREALDLTQEELAARLGKSRPAV
ANALRLLQLSAAAREDLQTGRISAGHARCLLGIDEPAAAEALRLRIQSHGMTVREAEDAAAFWRGNSALPWLEEEKQDRK
PAPQKISRKKSPAFKVLQKDLSSALGCAAKISGDENGGRISLNYANKQELDALLEKFGVALEGQ

Sequences:

>Translated_304_residues
MSGNKKGLGRGLDALFGGSEPKREQEAASSSLPVSSLRPNPGQPRRHFDEVALRELAASIKAQGIIQPLLVRPLAGGETY
QIVAGERRWRAAQMAGLDNVPVYIRELSDKEVMAAALIENLQREDLNPIEEAEALQALREALDLTQEELAARLGKSRPAV
ANALRLLQLSAAAREDLQTGRISAGHARCLLGIDEPAAAEALRLRIQSHGMTVREAEDAAAFWRGNSALPWLEEEKQDRK
PAPQKISRKKSPAFKVLQKDLSSALGCAAKISGDENGGRISLNYANKQELDALLEKFGVALEGQ
>Mature_303_residues
SGNKKGLGRGLDALFGGSEPKREQEAASSSLPVSSLRPNPGQPRRHFDEVALRELAASIKAQGIIQPLLVRPLAGGETYQ
IVAGERRWRAAQMAGLDNVPVYIRELSDKEVMAAALIENLQREDLNPIEEAEALQALREALDLTQEELAARLGKSRPAVA
NALRLLQLSAAAREDLQTGRISAGHARCLLGIDEPAAAEALRLRIQSHGMTVREAEDAAAFWRGNSALPWLEEEKQDRKP
APQKISRKKSPAFKVLQKDLSSALGCAAKISGDENGGRISLNYANKQELDALLEKFGVALEGQ

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32946; Mature: 32815

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNKKGLGRGLDALFGGSEPKREQEAASSSLPVSSLRPNPGQPRRHFDEVALRELAASI
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
KAQGIIQPLLVRPLAGGETYQIVAGERRWRAAQMAGLDNVPVYIRELSDKEVMAAALIEN
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHH
LQREDLNPIEEAEALQALREALDLTQEELAARLGKSRPAVANALRLLQLSAAAREDLQTG
HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
RISAGHARCLLGIDEPAAAEALRLRIQSHGMTVREAEDAAAFWRGNSALPWLEEEKQDRK
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCHHHHHHCCC
PAPQKISRKKSPAFKVLQKDLSSALGCAAKISGDENGGRISLNYANKQELDALLEKFGVA
CCHHHHHHCCCHHHHHHHHHHHHHHCCHHEECCCCCCCEEEEECCCHHHHHHHHHHHCCC
LEGQ
CCCC
>Mature Secondary Structure 
SGNKKGLGRGLDALFGGSEPKREQEAASSSLPVSSLRPNPGQPRRHFDEVALRELAASI
CCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
KAQGIIQPLLVRPLAGGETYQIVAGERRWRAAQMAGLDNVPVYIRELSDKEVMAAALIEN
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHH
LQREDLNPIEEAEALQALREALDLTQEELAARLGKSRPAVANALRLLQLSAAAREDLQTG
HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
RISAGHARCLLGIDEPAAAEALRLRIQSHGMTVREAEDAAAFWRGNSALPWLEEEKQDRK
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCCHHHHHHCCC
PAPQKISRKKSPAFKVLQKDLSSALGCAAKISGDENGGRISLNYANKQELDALLEKFGVA
CCHHHHHHCCCHHHHHHHHHHHHHHCCHHEECCCCCCCEEEEECCCHHHHHHHHHHHCCC
LEGQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]