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The map label for this gene is yebA [C]

Identifier: 220903288

GI number: 220903288

Start: 649

End: 2220

Strand: Reverse

Name: yebA [C]

Synonym: Ddes_0002

Alternate gene names: 220903288

Gene position: 2220-649 (Counterclockwise)

Preceding gene: 220903301

Following gene: 220903287

Centisome position: 0.08

GC content: 56.42

Gene sequence:

>1572_bases
GTGGGCCTGCCCGTTGAACTGGACAAGGCCCTTGCCCATGCGTATAAGCTCCTCATGGGATCAAAGATGAAAAGACTATG
GTTGGCAGGGGTCTTGCTGTTGGCGGTGCTGGGTTTTGTTGTGGCCCGCCATGCGGGATTGCCCGGTCTTTCGGCCGTTA
GCGGGCCGGAATCCGCGCAGGAGCAGGCTGCAGTTCCGAACAGCGAACAAACGCAGGAACATGACGGCTCCCAGGGCAAT
CCATCGCTCCAGAACCCAGAAAACAATCCCGCCGGCTCCGGCGAACCAGATTCTTCCTCCGCTTCTTCTCCTTCCAGTGA
TTCAACCAATGCAGATCATGCAGATCTGGCCGCTGACGCAGCCGCAGATGCGGCGGATGCCGGGGCAGCGCCCGGTGAGG
CTGTAGTACGCGGTACTTTTGAACGGGGTGACACCGTAAGCAAGGTTCTTGAAAATTCCGGCGGGCAGGGAACACATCAG
TATGTCAGTGCGGCGCGTCAGGTTTTTTCCATGCGCTCCTTTCGTGAAGGACAGCCCTATGTTGTGGTTACCGATACGGA
ATCCGGCAAGGTAAAACGTTTTGAATACGAGATAGACAGCCATCACCGGCTTGTCGTCGAGGGTACGGATGCCCCTGCCG
CCAGGCTGGAACCCATTGAGTATGTCGTGCTGCTGGATTCTGTTGCCGGAACCATCAACGACAATCTTTTTCAGGCTGTG
GCCGATATGGGCGAAAGTCCGCAAATGGCCCTCAAGCTGGCAGACCTTTTCGGTGCGGAAATAAACTTTATCCGTGACCT
GCAACAGGGCGATTCTTTTGCCGTGCTGGTGGAAAAACGCTACCGGGAGGGCGAGTACAAGGGCTATGGCCGTATTCTTG
CCGCGCACTTCACCAATAAGGGTAAAACCTACGAAGCCTATATTTTCAAGGACGGCAAAAGGGCTGAATATTATAACCGC
AAGGGCGAAAGCCTGCGCAAAACCCTGCTGCAGGCCCCTCTAGCCTTTACGCGCATCACCTCGCGCTTTACAAACAGCCG
TTTGCACCCCATATTGAATTACAGACGCGCCCATCACGGTGTGGACTATGCCGCGCCTACAGGTACTCCGGTCAAAGCTG
TGGGTGATGGGGTCGTGACACAGCGCTCCTGGGCCGGAGGCTACGGCAACCAGATTATCGTCAAGCATACTGCCGGGCTG
GAATCCATGTACGCGCACCTTTCAGGGTATGCGCGCGGCCTTGCCAAGGGGCAGCGTGTACGCCAGGGGCAGGTTATCGG
TTTTGTGGGCAGTACCGGTCTGGCTACCGGCCCGCACCTGGATTTTCGTCTGCGCCAGAACGGCAAGTTTATTGACCCGG
CCAAGGCCATCAACCCGCGCGGTGAGCCGGTGTCCAAAAAGGCCATGGCTGAATTTGAAAAAATCGTGGCTCTTGAGCTG
GCGTATCTTAACGGAGAAAAACCCCTCTCTGAATATGAGCCGGGCAGTATCGTGCCTGATAAGCCCATTCCCGCGCCTGA
AAAACCCGCGGAAAAAGAAAAAAGCAAACCCGCCAAAAAAGGGCGGCGCTGA

Upstream 100 bases:

>100_bases
TTTTCATTTCATCCGGCACATGCGGCAGGCAGCCACAGGGGCATGATGTCCGAACCGATTTGGGAACAGGAAAAAAACGT
GCAGTAATGCGGCCCTGACT

Downstream 100 bases:

>100_bases
AGTAACGCCGCTCTCGCAAGGAGGGCCGTCATGATGTACTTTCAGCCACTTTCGGGCATTGCTCTGGTCGCCCAGAATAC
TCCGCCCGATACTACGGATG

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MGLPVELDKALAHAYKLLMGSKMKRLWLAGVLLLAVLGFVVARHAGLPGLSAVSGPESAQEQAAVPNSEQTQEHDGSQGN
PSLQNPENNPAGSGEPDSSSASSPSSDSTNADHADLAADAAADAADAGAAPGEAVVRGTFERGDTVSKVLENSGGQGTHQ
YVSAARQVFSMRSFREGQPYVVVTDTESGKVKRFEYEIDSHHRLVVEGTDAPAARLEPIEYVVLLDSVAGTINDNLFQAV
ADMGESPQMALKLADLFGAEINFIRDLQQGDSFAVLVEKRYREGEYKGYGRILAAHFTNKGKTYEAYIFKDGKRAEYYNR
KGESLRKTLLQAPLAFTRITSRFTNSRLHPILNYRRAHHGVDYAAPTGTPVKAVGDGVVTQRSWAGGYGNQIIVKHTAGL
ESMYAHLSGYARGLAKGQRVRQGQVIGFVGSTGLATGPHLDFRLRQNGKFIDPAKAINPRGEPVSKKAMAEFEKIVALEL
AYLNGEKPLSEYEPGSIVPDKPIPAPEKPAEKEKSKPAKKGRR

Sequences:

>Translated_523_residues
MGLPVELDKALAHAYKLLMGSKMKRLWLAGVLLLAVLGFVVARHAGLPGLSAVSGPESAQEQAAVPNSEQTQEHDGSQGN
PSLQNPENNPAGSGEPDSSSASSPSSDSTNADHADLAADAAADAADAGAAPGEAVVRGTFERGDTVSKVLENSGGQGTHQ
YVSAARQVFSMRSFREGQPYVVVTDTESGKVKRFEYEIDSHHRLVVEGTDAPAARLEPIEYVVLLDSVAGTINDNLFQAV
ADMGESPQMALKLADLFGAEINFIRDLQQGDSFAVLVEKRYREGEYKGYGRILAAHFTNKGKTYEAYIFKDGKRAEYYNR
KGESLRKTLLQAPLAFTRITSRFTNSRLHPILNYRRAHHGVDYAAPTGTPVKAVGDGVVTQRSWAGGYGNQIIVKHTAGL
ESMYAHLSGYARGLAKGQRVRQGQVIGFVGSTGLATGPHLDFRLRQNGKFIDPAKAINPRGEPVSKKAMAEFEKIVALEL
AYLNGEKPLSEYEPGSIVPDKPIPAPEKPAEKEKSKPAKKGRR
>Mature_522_residues
GLPVELDKALAHAYKLLMGSKMKRLWLAGVLLLAVLGFVVARHAGLPGLSAVSGPESAQEQAAVPNSEQTQEHDGSQGNP
SLQNPENNPAGSGEPDSSSASSPSSDSTNADHADLAADAAADAADAGAAPGEAVVRGTFERGDTVSKVLENSGGQGTHQY
VSAARQVFSMRSFREGQPYVVVTDTESGKVKRFEYEIDSHHRLVVEGTDAPAARLEPIEYVVLLDSVAGTINDNLFQAVA
DMGESPQMALKLADLFGAEINFIRDLQQGDSFAVLVEKRYREGEYKGYGRILAAHFTNKGKTYEAYIFKDGKRAEYYNRK
GESLRKTLLQAPLAFTRITSRFTNSRLHPILNYRRAHHGVDYAAPTGTPVKAVGDGVVTQRSWAGGYGNQIIVKHTAGLE
SMYAHLSGYARGLAKGQRVRQGQVIGFVGSTGLATGPHLDFRLRQNGKFIDPAKAINPRGEPVSKKAMAEFEKIVALELA
YLNGEKPLSEYEPGSIVPDKPIPAPEKPAEKEKSKPAKKGRR

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=381, Percent_Identity=30.4461942257218, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI87082297, Length=96, Percent_Identity=38.5416666666667, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 56337; Mature: 56206

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPVELDKALAHAYKLLMGSKMKRLWLAGVLLLAVLGFVVARHAGLPGLSAVSGPESAQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
EQAAVPNSEQTQEHDGSQGNPSLQNPENNPAGSGEPDSSSASSPSSDSTNADHADLAADA
HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AADAADAGAAPGEAVVRGTFERGDTVSKVLENSGGQGTHQYVSAARQVFSMRSFREGQPY
HCCHHCCCCCCCHHHEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCE
VVVTDTESGKVKRFEYEIDSHHRLVVEGTDAPAARLEPIEYVVLLDSVAGTINDNLFQAV
EEEEECCCCCEEEEEEEECCCCEEEEECCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHH
ADMGESPQMALKLADLFGAEINFIRDLQQGDSFAVLVEKRYREGEYKGYGRILAAHFTNK
HHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCEEEEEEECCC
GKTYEAYIFKDGKRAEYYNRKGESLRKTLLQAPLAFTRITSRFTNSRLHPILNYRRAHHG
CCEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
VDYAAPTGTPVKAVGDGVVTQRSWAGGYGNQIIVKHTAGLESMYAHLSGYARGLAKGQRV
CCCCCCCCCCHHHHCCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
RQGQVIGFVGSTGLATGPHLDFRLRQNGKFIDPAKAINPRGEPVSKKAMAEFEKIVALEL
CCCCEEEEECCCCCCCCCCCEEEECCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH
AYLNGEKPLSEYEPGSIVPDKPIPAPEKPAEKEKSKPAKKGRR
HEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHCCCC
>Mature Secondary Structure 
GLPVELDKALAHAYKLLMGSKMKRLWLAGVLLLAVLGFVVARHAGLPGLSAVSGPESAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
EQAAVPNSEQTQEHDGSQGNPSLQNPENNPAGSGEPDSSSASSPSSDSTNADHADLAADA
HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AADAADAGAAPGEAVVRGTFERGDTVSKVLENSGGQGTHQYVSAARQVFSMRSFREGQPY
HCCHHCCCCCCCHHHEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCE
VVVTDTESGKVKRFEYEIDSHHRLVVEGTDAPAARLEPIEYVVLLDSVAGTINDNLFQAV
EEEEECCCCCEEEEEEEECCCCEEEEECCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHH
ADMGESPQMALKLADLFGAEINFIRDLQQGDSFAVLVEKRYREGEYKGYGRILAAHFTNK
HHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCEEEEEEECCC
GKTYEAYIFKDGKRAEYYNRKGESLRKTLLQAPLAFTRITSRFTNSRLHPILNYRRAHHG
CCEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
VDYAAPTGTPVKAVGDGVVTQRSWAGGYGNQIIVKHTAGLESMYAHLSGYARGLAKGQRV
CCCCCCCCCCHHHHCCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
RQGQVIGFVGSTGLATGPHLDFRLRQNGKFIDPAKAINPRGEPVSKKAMAEFEKIVALEL
CCCCEEEEECCCCCCCCCCCEEEECCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH
AYLNGEKPLSEYEPGSIVPDKPIPAPEKPAEKEKSKPAKKGRR
HEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]