Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903293

Identifier: 220903293

GI number: 220903293

Start: 10569

End: 11483

Strand: Direct

Name: 220903293

Synonym: Ddes_0007

Alternate gene names: NA

Gene position: 10569-11483 (Clockwise)

Preceding gene: 220903292

Following gene: 220903294

Centisome position: 0.37

GC content: 60.77

Gene sequence:

>915_bases
ATGTTTTTCACTGCTGAAAAACGTGGTTTCAGGGGGGCACTGCCCCCCTGTCCACCTGAAGGACGGCAACGTCCCTCGGG
CGGACGCGGTTTTTTTCTTTTTCCGCTGGGCGGCAGTGTGCGCGGACTTGCGCTGGCCGTGGCTTTTTGTTTCTGTCTTG
GCCTTGCAGGCTGCGACAACCCGGTATTGCAGGGCGACGACCTTTCCCAGGCCAGGGAGGCTGTGGCGCAGCGCCAGTGG
TCCCTTGCGGAAAGGCTGCTTGAGCGTTATCTGCGTGAGGCACAGGACAGCCAGAATGCGGACGACCGTTGGGAAGCCTG
GCAGCAGTTGCTGCTGGTCGTCAATGCCGCGGGGCAGGAACCCCGCGCCAGCCTGGAATATCTTGAAACCATGCTGGAAG
AGTATATGGACGACGACGCCCGCAGCGCGGTCGTCCTGCGGCGCATGGCCGAGGTCAATGAAAGCCTGCATCGCCATGAG
CGCGCCGTGGATTTATGGAACGCCTACATAGGGCTTGGCGGCCTCGGGCCGGAGCAGATACTTGAAGGACACCGGCGTCT
GGCGGCCATGCAGTTCAGCCTGCGGCGTTTCGATGCCGGAGAGGACACGCTTCAGCAGTGCCTGGGCCTGCCCCTGCCGG
ACCATGACAAGATCATGTGCATGTATGATCTTGCTGACCAGAACATGGCCCGGGAGCGCTGGCAAGATGTGGCCGATCTT
TCACAGCAGATACTGGACAGCGACCCTGACCAGAATCTGCGCGGGCTGGCCGGCTATCTGCTGGCCGATGCCCTGGAACA
GCTGGGCAAGGGCACGGAAGCCCTGAAACAGTTTGAACTGGCGCGCGACGCATACCCCAATCCGTCGGTCATCGACAATC
GCATTGCGCATTTGCGCAAAAAACTGAAGAAGTAA

Upstream 100 bases:

>100_bases
GCAGCGCGCCCGCGGCTCAGGACGCGCCCTCTTCCGCCCCTGCAGACAGGGGGGCAGGTGAAGGCGGGACAGGCGAAGAC
GCCTGAGATGGATCTGCATA

Downstream 100 bases:

>100_bases
GGCTTATGATTAAGCACGAATGCGGTGTTTTCGGCATTTATGACCATGACGATGCTGCCCGTCTGGCCTATTTCGGCCTT
TATGCCCAGCAGCACCGGGG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFFTAEKRGFRGALPPCPPEGRQRPSGGRGFFLFPLGGSVRGLALAVAFCFCLGLAGCDNPVLQGDDLSQAREAVAQRQW
SLAERLLERYLREAQDSQNADDRWEAWQQLLLVVNAAGQEPRASLEYLETMLEEYMDDDARSAVVLRRMAEVNESLHRHE
RAVDLWNAYIGLGGLGPEQILEGHRRLAAMQFSLRRFDAGEDTLQQCLGLPLPDHDKIMCMYDLADQNMARERWQDVADL
SQQILDSDPDQNLRGLAGYLLADALEQLGKGTEALKQFELARDAYPNPSVIDNRIAHLRKKLKK

Sequences:

>Translated_304_residues
MFFTAEKRGFRGALPPCPPEGRQRPSGGRGFFLFPLGGSVRGLALAVAFCFCLGLAGCDNPVLQGDDLSQAREAVAQRQW
SLAERLLERYLREAQDSQNADDRWEAWQQLLLVVNAAGQEPRASLEYLETMLEEYMDDDARSAVVLRRMAEVNESLHRHE
RAVDLWNAYIGLGGLGPEQILEGHRRLAAMQFSLRRFDAGEDTLQQCLGLPLPDHDKIMCMYDLADQNMARERWQDVADL
SQQILDSDPDQNLRGLAGYLLADALEQLGKGTEALKQFELARDAYPNPSVIDNRIAHLRKKLKK
>Mature_304_residues
MFFTAEKRGFRGALPPCPPEGRQRPSGGRGFFLFPLGGSVRGLALAVAFCFCLGLAGCDNPVLQGDDLSQAREAVAQRQW
SLAERLLERYLREAQDSQNADDRWEAWQQLLLVVNAAGQEPRASLEYLETMLEEYMDDDARSAVVLRRMAEVNESLHRHE
RAVDLWNAYIGLGGLGPEQILEGHRRLAAMQFSLRRFDAGEDTLQQCLGLPLPDHDKIMCMYDLADQNMARERWQDVADL
SQQILDSDPDQNLRGLAGYLLADALEQLGKGTEALKQFELARDAYPNPSVIDNRIAHLRKKLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34226; Mature: 34226

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFTAEKRGFRGALPPCPPEGRQRPSGGRGFFLFPLGGSVRGLALAVAFCFCLGLAGCDN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
PVLQGDDLSQAREAVAQRQWSLAERLLERYLREAQDSQNADDRWEAWQQLLLVVNAAGQE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
PRASLEYLETMLEEYMDDDARSAVVLRRMAEVNESLHRHERAVDLWNAYIGLGGLGPEQI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LEGHRRLAAMQFSLRRFDAGEDTLQQCLGLPLPDHDKIMCMYDLADQNMARERWQDVADL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHH
SQQILDSDPDQNLRGLAGYLLADALEQLGKGTEALKQFELARDAYPNPSVIDNRIAHLRK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KLKK
HHCC
>Mature Secondary Structure
MFFTAEKRGFRGALPPCPPEGRQRPSGGRGFFLFPLGGSVRGLALAVAFCFCLGLAGCDN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
PVLQGDDLSQAREAVAQRQWSLAERLLERYLREAQDSQNADDRWEAWQQLLLVVNAAGQE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
PRASLEYLETMLEEYMDDDARSAVVLRRMAEVNESLHRHERAVDLWNAYIGLGGLGPEQI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LEGHRRLAAMQFSLRRFDAGEDTLQQCLGLPLPDHDKIMCMYDLADQNMARERWQDVADL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHH
SQQILDSDPDQNLRGLAGYLLADALEQLGKGTEALKQFELARDAYPNPSVIDNRIAHLRK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KLKK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA