Click here to switch to the map view.

The map label for this gene is yngA [H]

Identifier: 218906613

GI number: 218906613

Start: 5233064

End: 5233447

Strand: Direct

Name: yngA [H]

Synonym: BCAH820_5527

Alternate gene names: 218906613

Gene position: 5233064-5233447 (Clockwise)

Preceding gene: 218906611

Following gene: 218906614

Centisome position: 98.69

GC content: 28.39

Gene sequence:

>384_bases
ATGGAGAAACTCTTAAAGTTTGGTTTAGTAGGGATCTTTAATACACTCATTACAATTATTAGCTTTTGGATATTATTAAA
ATTCGGGATGAACTACCTGATTGCGAATACCATTGCCTATTTAATTGGTGTTGCCAATAGCTACTATTGGAATAAAAATT
GGGTGTTTAAACCTAATAATAAAAGCACGTCAATGTTCTTTAAATTTCTAACTGTAAATTTAATTGTATTGGGTTTTAAT
ACATTATGTTTATTTATATTGGTAGATAAACTTACTGTCAATAAATTAATTGCACAGATCTTCGCAATTGGTGTCGGAAT
GGTTATAAATTTTGTCCTTAATAAAATTTGGACATTCAACCAAATGGAAAAGGCTACTAATTAA

Upstream 100 bases:

>100_bases
CTTAGCATAAATTATGCTATAATTGATAGTTGTTATGTACGAGTAACCTTTCTACATTTCCTGTTTTGTTTATACATTTT
ATAAAGTTGAGGATACTATT

Downstream 100 bases:

>100_bases
ACTGAAACAATTTATTAAAAATACGGAGGATACAACATGCAAAAATTAATCTCGGTTGTAGTTCCTATGTACTTCGAGGA
AGAAGTAGCACAGGAATGTT

Product: gtrA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MEKLLKFGLVGIFNTLITIISFWILLKFGMNYLIANTIAYLIGVANSYYWNKNWVFKPNNKSTSMFFKFLTVNLIVLGFN
TLCLFILVDKLTVNKLIAQIFAIGVGMVINFVLNKIWTFNQMEKATN

Sequences:

>Translated_127_residues
MEKLLKFGLVGIFNTLITIISFWILLKFGMNYLIANTIAYLIGVANSYYWNKNWVFKPNNKSTSMFFKFLTVNLIVLGFN
TLCLFILVDKLTVNKLIAQIFAIGVGMVINFVLNKIWTFNQMEKATN
>Mature_127_residues
MEKLLKFGLVGIFNTLITIISFWILLKFGMNYLIANTIAYLIGVANSYYWNKNWVFKPNNKSTSMFFKFLTVNLIVLGFN
TLCLFILVDKLTVNKLIAQIFAIGVGMVINFVLNKIWTFNQMEKATN

Specific function: Unknown

COG id: COG2246

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gtrA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007267 [H]

Pfam domain/function: PF04138 GtrA [H]

EC number: NA

Molecular weight: Translated: 14633; Mature: 14633

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLLKFGLVGIFNTLITIISFWILLKFGMNYLIANTIAYLIGVANSYYWNKNWVFKPNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEECCCC
KSTSMFFKFLTVNLIVLGFNTLCLFILVDKLTVNKLIAQIFAIGVGMVINFVLNKIWTFN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMEKATN
HHHHCCC
>Mature Secondary Structure
MEKLLKFGLVGIFNTLITIISFWILLKFGMNYLIANTIAYLIGVANSYYWNKNWVFKPNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEECCCC
KSTSMFFKFLTVNLIVLGFNTLCLFILVDKLTVNKLIAQIFAIGVGMVINFVLNKIWTFN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMEKATN
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]