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The map label for this gene is yxdK [H]

Identifier: 218906061

GI number: 218906061

Start: 4670756

End: 4671778

Strand: Direct

Name: yxdK [H]

Synonym: BCAH820_4949

Alternate gene names: 218906061

Gene position: 4670756-4671778 (Clockwise)

Preceding gene: 218906060

Following gene: 218906062

Centisome position: 88.08

GC content: 36.07

Gene sequence:

>1023_bases
ATGAAGTTATTTTTACGTGATCATTTTGCATTTTTTCTACTGTACGTATTAAACTTCGGTATCATTTTCGTTCTCTATGA
TGCAGTAGATGGATTTCAAAATAATAAATTTTACTTCGTCGTTTTAAGCTTATACTTATTTATTTGTTTCCTCGCTTACC
GTTACGTTCGCAATCGTAGAATGTACCATAGATTAAGTGAACAACCAGAAAAAATGGAAGATGCGTTTATTGAAAGAGCA
ACTGCTCCGATGCCTCACGGTGTAAATGAACTCGTGCGCACGCAGTATCGTCTCTTCCAAAAAGAACTACAATCGTATGA
AGTAAAACAACAAGAACATCAATTATTCATTAACCACTGGGTGCATCAAATGAAAACGCCCGTTTCTGTTATGCAACTTA
TGGTGCTCGAAATGGAAGATGAACATTTAATTCCGAAATTCAAAAAAGAATTAGAACGTCTAAACCAAGGGCTTGATATG
GCTTTATACATGGCAAGGTTAAATAACTTCCATGAAGACTTCCATGTTGAGACGATTTCATTAAAAGATACGGTAACGAA
AAATATTAATGGATTAAAAGAACTATTTATCCGAAACGGAGTCTTCCCTGTTTTAGAAGTTCATTCTGATTTAAAGGTTG
CTTCTGATGCGAAATGGCTAAAATTTATCATCTATCAGTTAATGACAAATGCCGTTCGTTACTCTGGTGAGCGCGGAAAG
AAAGTATTCTTATCCGCTTATCGAAACGGAAAAGATATTATTTTAGAAGTTCGTGATGAAGGTGTTGGTATTCCGCAAGA
AGATATTCGACGAGTATTCGAACCGTTTTACACTGGGAAAAATGGTCGTACATTCGGAGAATCTACTGGTATGGGACTTT
ATATCGTAAGTAAGATTTGTGATTATTTAGGTCACTCTGTCAAACTAGATTCTGAAGTTGGTAAAGGAACGACGATTAAA
ATCATCTTCCACAACGCTGCAAATAATCAATCAGAACATGCGGAGAAGGTGACCGAAGCATGA

Upstream 100 bases:

>100_bases
CGCGTCTTCGTAAAAAGTTCAATGAGCTTGGTATTGAAAATGCTATTGAAACAGTGCGCGGACTTGGGTATCGTTTTAAC
GCAACTTGGAGTGAATAAGC

Downstream 100 bases:

>100_bases
TCGTGACATATGCAAGCAAAATGTATGAGAACTCACTCTCATACATTTTTTGCAATAAAACTACTTCTATATCTTCTAAC
CGGAGGTATAATTTATGACA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKLFLRDHFAFFLLYVLNFGIIFVLYDAVDGFQNNKFYFVVLSLYLFICFLAYRYVRNRRMYHRLSEQPEKMEDAFIERA
TAPMPHGVNELVRTQYRLFQKELQSYEVKQQEHQLFINHWVHQMKTPVSVMQLMVLEMEDEHLIPKFKKELERLNQGLDM
ALYMARLNNFHEDFHVETISLKDTVTKNINGLKELFIRNGVFPVLEVHSDLKVASDAKWLKFIIYQLMTNAVRYSGERGK
KVFLSAYRNGKDIILEVRDEGVGIPQEDIRRVFEPFYTGKNGRTFGESTGMGLYIVSKICDYLGHSVKLDSEVGKGTTIK
IIFHNAANNQSEHAEKVTEA

Sequences:

>Translated_340_residues
MKLFLRDHFAFFLLYVLNFGIIFVLYDAVDGFQNNKFYFVVLSLYLFICFLAYRYVRNRRMYHRLSEQPEKMEDAFIERA
TAPMPHGVNELVRTQYRLFQKELQSYEVKQQEHQLFINHWVHQMKTPVSVMQLMVLEMEDEHLIPKFKKELERLNQGLDM
ALYMARLNNFHEDFHVETISLKDTVTKNINGLKELFIRNGVFPVLEVHSDLKVASDAKWLKFIIYQLMTNAVRYSGERGK
KVFLSAYRNGKDIILEVRDEGVGIPQEDIRRVFEPFYTGKNGRTFGESTGMGLYIVSKICDYLGHSVKLDSEVGKGTTIK
IIFHNAANNQSEHAEKVTEA
>Mature_340_residues
MKLFLRDHFAFFLLYVLNFGIIFVLYDAVDGFQNNKFYFVVLSLYLFICFLAYRYVRNRRMYHRLSEQPEKMEDAFIERA
TAPMPHGVNELVRTQYRLFQKELQSYEVKQQEHQLFINHWVHQMKTPVSVMQLMVLEMEDEHLIPKFKKELERLNQGLDM
ALYMARLNNFHEDFHVETISLKDTVTKNINGLKELFIRNGVFPVLEVHSDLKVASDAKWLKFIIYQLMTNAVRYSGERGK
KVFLSAYRNGKDIILEVRDEGVGIPQEDIRRVFEPFYTGKNGRTFGESTGMGLYIVSKICDYLGHSVKLDSEVGKGTTIK
IIFHNAANNQSEHAEKVTEA

Specific function: Probable member of the two-component regulatory system yxdK/yxdJ. May activate yxdJ in response to the antibacterial protein LL-37 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=253, Percent_Identity=22.5296442687747, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI48994928, Length=131, Percent_Identity=29.7709923664122, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 39880; Mature: 39880

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFLRDHFAFFLLYVLNFGIIFVLYDAVDGFQNNKFYFVVLSLYLFICFLAYRYVRNRR
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MYHRLSEQPEKMEDAFIERATAPMPHGVNELVRTQYRLFQKELQSYEVKQQEHQLFINHW
HHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHQMKTPVSVMQLMVLEMEDEHLIPKFKKELERLNQGLDMALYMARLNNFHEDFHVETIS
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCEEEEE
LKDTVTKNINGLKELFIRNGVFPVLEVHSDLKVASDAKWLKFIIYQLMTNAVRYSGERGK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
KVFLSAYRNGKDIILEVRDEGVGIPQEDIRRVFEPFYTGKNGRTFGESTGMGLYIVSKIC
EEHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
DYLGHSVKLDSEVGKGTTIKIIFHNAANNQSEHAEKVTEA
HHCCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKLFLRDHFAFFLLYVLNFGIIFVLYDAVDGFQNNKFYFVVLSLYLFICFLAYRYVRNRR
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MYHRLSEQPEKMEDAFIERATAPMPHGVNELVRTQYRLFQKELQSYEVKQQEHQLFINHW
HHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHQMKTPVSVMQLMVLEMEDEHLIPKFKKELERLNQGLDMALYMARLNNFHEDFHVETIS
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCEEEEE
LKDTVTKNINGLKELFIRNGVFPVLEVHSDLKVASDAKWLKFIIYQLMTNAVRYSGERGK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
KVFLSAYRNGKDIILEVRDEGVGIPQEDIRRVFEPFYTGKNGRTFGESTGMGLYIVSKIC
EEHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
DYLGHSVKLDSEVGKGTTIKIIFHNAANNQSEHAEKVTEA
HHCCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 8867804 [H]