Click here to switch to the map view.

The map label for this gene is yxdM [H]

Identifier: 218906062

GI number: 218906062

Start: 4671873

End: 4673846

Strand: Direct

Name: yxdM [H]

Synonym: BCAH820_4950

Alternate gene names: 218906062

Gene position: 4671873-4673846 (Clockwise)

Preceding gene: 218906061

Following gene: 218906063

Centisome position: 88.1

GC content: 31.66

Gene sequence:

>1974_bases
ATGACATTTTGGCAATTTGCATTTAAAAACGTCACGCGCAACTCGAGAGCTTATTTTGCTTACTTTGTAAGTAGTTCTTT
TTCGATTGCCGTTTTCTTTTCATTTGCTGTTTACTTATTCCATCCGAAATTACAAAAATTTGGCATGGTCTCTGAAATTT
CAGGATTAATGATATTTTCAGAAGTAGTAATTGTATTTTTCTCTTTCTTCTTTTTACTATATTCCATTGGTACTTTTTTA
AAAGTTAGAAAAAAACAATTCGGCGTTTTGACCGTTTTAGGAATATCTAGAAAACAATTACATCGTCTTGTTTTTATGGA
GAATATGTTAATCGGTATTTTATCTATCTTTTTCGGTATGCAGTTTGGACTTGTCTTCTCGCAATTTTTCTTATTAGTGA
CAGCAAAAATTACGCACGTACCAGGCATATATTTATACTTGCCTATTAACGCGTTTATTTTAACGACAATCGTCTTCCTT
AGTCTTTTTATCGTTGTATCTACATTGACACCGATGCTCATTCGTACAAAAAAAGCGGTACACCTTTTAAAAATAAATAG
TAAAAAACGAAAAGAAAGAAAACCGTCCATACTTATTTCTTTATTTGGTGCGATTTGTTTATTTGGTGGCTATGCGTTAG
CTGGAAATCCTAAATATTTCGTATCAGTAAGCCCACAAATAGGTGTTATATATATGGTTTCAAGTATTTTCGTCATTCCA
GCGCTCGTTACAATCGGTACATATTTCTTCTTTTCACAAATTAGTTTCTTACTTATTTATATTTTAAAGAAAAGAAGAAA
GTTTTATATGAAACAAATTAATATGCTTTGGATTTCTGATTTAGCAAACCGTATTCGAACGAATATTAATATGCTTTTTA
TTGTAGCAATGCTATCTACTATCGCTTTCACAATGATTACGTTTCTATATGGGTTCGGAAAATTTATTAAGCTAGACGTT
AATCGAACTTCGCCTTTCCCAATTTCTTATTTTTCTTATGATGCGAATCCTTTTGTTACAGAGCATTTAAATTGGCTTGA
ACAACAATTACAAAAAGAGCATTTTCCTTATGAGAAAATAACAGCTGATATATATGAAACACCGCTAGAAGAAGATAAAG
GTATAGCTATTTATAATGACGTATACGCAATTAAGCAAAGTGACTATAACAAACTTGCGGATTCTTTACGAATGAAACAA
CTATTTATGAATGATAACGAGGCATATGTTTTAACGGGGACGTCTTATATCACTATATTTAATGAATTTGAGCAAAGCTA
CAAAAGAGATTACATTACACTCTCTAGTACAAATACGAAATTAAAAGTTAAAGGCTATGAACAGATCCATGCAATTCCAT
CTAATTTTTCATATCAAACGATAGTTTTGCCTGATATTATCGTGAACAACTTACCTAACACAGCAAAGCATATATCGGCA
TATAATTACAAAATCCAGAACTGGGAACAGACATATGAAATTGCTAATACTTTTATAGAAAAAGTGCAAAAAGATCGCAA
TAAATCTCAGTATGAAGAACCTCTTATTCGATCCTTTGAATCAGCAGGATCGTTATACAGAATAACATCTGGTAGTGCTG
CATACTTCCTAATTGGAACATTTTTAGGAGTTATTTTCTTCATTGGAGCCGGTAGCGTTCTTTACTTTAGAATGTATACC
GATTTGACGAACGAACAAGAGAAATATATAACGATTTCTAAAATCGGTGTAACAGGTGCAGAGATGAAACGATCTGCAAC
CATTCAACTTAGTATTTTATTTTTCGTTCCGTACATTATGGCATCCATTCATACAATGTTCGCAACGAAAATGCTACAAG
ATGTAATTGGCTTATCTTTGTTCAAAGAAGTTTCAGCCGTTCTTATTATTTTTGGATTCGTTGAAATCGTATTTTTCTTA
TTCATTCGTTCACTTTATATGCAAAAGCTATCACAATATACTAATACACATTAA

Upstream 100 bases:

>100_bases
GCATGATCGTGACATATGCAAGCAAAATGTATGAGAACTCACTCTCATACATTTTTTGCAATAAAACTACTTCTATATCT
TCTAACCGGAGGTATAATTT

Downstream 100 bases:

>100_bases
AAAGGTTATTACATGAAAAAGGTGGGATCTCTTCCCTCCTTTTTCATGCTCATTATATTAGGAGGTTTAGGTGAATGACA
TTTTGGCAGTTTGCATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFSEVVIVFFSFFFLLYSIGTFL
KVRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGMQFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFL
SLFIVVSTLTPMLIRTKKAVHLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIP
ALVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDV
NRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLADSLRMKQ
LFMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTAKHISA
YNYKIQNWEQTYEIANTFIEKVQKDRNKSQYEEPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYT
DLTNEQEKYITISKIGVTGAEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFL
FIRSLYMQKLSQYTNTH

Sequences:

>Translated_657_residues
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFSEVVIVFFSFFFLLYSIGTFL
KVRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGMQFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFL
SLFIVVSTLTPMLIRTKKAVHLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIP
ALVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDV
NRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLADSLRMKQ
LFMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTAKHISA
YNYKIQNWEQTYEIANTFIEKVQKDRNKSQYEEPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYT
DLTNEQEKYITISKIGVTGAEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFL
FIRSLYMQKLSQYTNTH
>Mature_656_residues
TFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFSEVVIVFFSFFFLLYSIGTFLK
VRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGMQFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFLS
LFIVVSTLTPMLIRTKKAVHLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIPA
LVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYGFGKFIKLDVN
RTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLADSLRMKQL
FMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTAKHISAY
NYKIQNWEQTYEIANTFIEKVQKDRNKSQYEEPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAGSVLYFRMYTD
LTNEQEKYITISKIGVTGAEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLF
IRSLYMQKLSQYTNTH

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 75932; Mature: 75801

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFS
CCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EVVIVFFSFFFLLYSIGTFLKVRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFLSLFIVVSTLTPMLIRTKKAV
HHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIP
EEEEECCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCHHHHHHHHHHHHH
ALVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
IAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKI
HHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH
TADIYETPLEEDKGIAIYNDVYAIKQSDYNKLADSLRMKQLFMNDNEAYVLTGTSYITIF
HHHHHHCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHH
NEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTAKHISA
HHHHHHHCCCEEEEECCCCEEEEECHHHHHCCCCCCCEEEEEEHHHHHCCCCCHHHHHHH
YNYKIQNWEQTYEIANTFIEKVQKDRNKSQYEEPLIRSFESAGSLYRITSGSAAYFLIGT
HCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
FLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATIQLSILFFVPYIM
HHHHHHHHCCCHHEEEEEHHHCCCCCCCEEEEEECCCCHHHHCCCCEEEEHHHHHHHHHH
ASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLSQYTNTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TFWQFAFKNVTRNSRAYFAYFVSSSFSIAVFFSFAVYLFHPKLQKFGMVSEISGLMIFS
CHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EVVIVFFSFFFLLYSIGTFLKVRKKQFGVLTVLGISRKQLHRLVFMENMLIGILSIFFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QFGLVFSQFFLLVTAKITHVPGIYLYLPINAFILTTIVFLSLFIVVSTLTPMLIRTKKAV
HHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLKINSKKRKERKPSILISLFGAICLFGGYALAGNPKYFVSVSPQIGVIYMVSSIFVIP
EEEEECCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCHHHHHHHHHHHHH
ALVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
IAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKI
HHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH
TADIYETPLEEDKGIAIYNDVYAIKQSDYNKLADSLRMKQLFMNDNEAYVLTGTSYITIF
HHHHHHCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHH
NEFEQSYKRDYITLSSTNTKLKVKGYEQIHAIPSNFSYQTIVLPDIIVNNLPNTAKHISA
HHHHHHHCCCEEEEECCCCEEEEECHHHHHCCCCCCCEEEEEEHHHHHCCCCCHHHHHHH
YNYKIQNWEQTYEIANTFIEKVQKDRNKSQYEEPLIRSFESAGSLYRITSGSAAYFLIGT
HCEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
FLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATIQLSILFFVPYIM
HHHHHHHHCCCHHEEEEEHHHCCCCCCCEEEEEECCCCHHHHCCCCEEEEHHHHHHHHHH
ASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLSQYTNTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]