| Definition | Bacillus cereus AH820, complete genome. |
|---|---|
| Accession | NC_011773 |
| Length | 5,302,683 |
Click here to switch to the map view.
The map label for this gene is isdC [H]
Identifier: 218905773
GI number: 218905773
Start: 4412591
End: 4415314
Strand: Reverse
Name: isdC [H]
Synonym: BCAH820_4661
Alternate gene names: 218905773
Gene position: 4415314-4412591 (Counterclockwise)
Preceding gene: 218905774
Following gene: 218905772
Centisome position: 83.27
GC content: 34.21
Gene sequence:
>2724_bases ATGTTTTTAATGATATTTACATTCGTATCAACACTACAACCACTTGCAGTTCAAGCAGCTACTCAATTAGCTGACGGTGA ATACTCAATCGGTTTTAAAGTTCTTAAAGACGCATCGGATGAAGTATCCATGATGAATGAATACTCTGTAAGTCCAGGAA CTTTAAAAGTGAAGGATGGGAAAAAGAAAGTGTCCTTTACATTAAAAAATAGTTCATGGATTACGAAATTTGAAACAGAC AAAGCAGGTCAACTTGTTGAGACAAATGTAATTAGTGAAGATAAAGAAAAAGATACAAGAGTAGTAGAATTCGATGTGGA AGATGTAGAGAAGATATTAAAAGCGAAAGTAAAAGTAGATATTGATTTTCTGAACTATCATCATGAATATGATGTTCGTA TTGCATTTGATCAAAATAGCATTACACCAATTCATGTAGAAAAACCAGATGAAAAAGAGGACCCAGCTAATAAGCCAGAT CCAAATGAAACTACGGATCCAGGTCAGAAGCCCGACCAAAAGCCTGACCCAGATCAACAACCAAATTCTAACACAATTGA AGATGGTGCGTACAGCATTCCTTTCAAAGTGTTAAAAGATAAAACAGATGAAGAATCTAAAATGAATAGTTACATGGAAA ATCCAGGAGTATTGAAAGTAGAAAATGGTAAGAAAAAAGCGGTTGTAACGTTAAAAAGTAGCTCATTAATTAAAAATTTC CAAACGGAAAAAGATGGTGCATTTGTTGATGCAAAAGTAGTGAGTGAAGATAAAGAAAAAGATACAAGAGTAGTAGAGTT TGAAATAGCTGATTTATCGAAAAAACTTAATACAAAAGTATTTATTGAGATGGCATCAAGAAATTATAAACAAACGCATG ACGTACAACTTGTATTTGAACAAGACAAATTGGAACCTATTAAAAGTGAAGACAAACAACCAGACGGAGATAAACAACCA GACGGAGATAAACAACCAGACGGAGGCAAACAACCAGATGGAGATAAACAACCAGACGGAGGCAAACAACCAGACGGAGA CAAGCAACCAGACGGAGACAAACAACCAGACGTAGATACCATTAAAGATGGTGAATACAGTATTGGTTTTAAAGTATTGA AAGATAAAACAGAAGAAATTTCAATGATGAATACGTACACGAAGAGTCCAGGTGTACTAAAAGTGAAAGATGGAAAGAAA TATGTATCCTTCACATTAACGAATAGCTCATGGATTACAAAGTTCGAATTTGAAAAGAATAATTCATTTGTTGATGCAAG TGTATTAAGTGAAGATAAGAAAGCTGATACACGTGTAGTAGAAGTAGAAGTAGCTGATTTATCTAAGAAACTAAATGCAA AAGTGAAAGTAGATATTGATTCAATGAATTATCACCATTTCTATGATATTCAATTTGCATTTGATAACGATAGTATTCAA CCGTTAGACAATCAAGGCGAAAATGACAACCAAGGTGGAAACGACAACCAAGGTGGAAACGACAACCAAGGTGGAAATGA CAACCAAGGCGGAAACAACAACCAAGGCGGAAACGACAGCCAAGACGGTAACACAGCAATTGATCCAAACGCTCTTAAAG ACGGTGAATACAGTATCGGTTTTAAAGTGTTAAAAGATAAAACAGAAGAAATTTCAATGATGAACACATATACGAAGAAT CCAGGTGTATTAAAAGTGAAAGATGGAAAGAAATATGTATCCTTCACATTAACAAATAGCTCATGGATTACGAAGTTTGA GTTTGAAAAGAATGGTGCGTTCGTCGATGCGCAAGTATTAGGTATAAATAAAGAGAAAGATACAAGAGTAGTAGAAGTGG AAATAGATGATTTATCGAAAAAGTTAAATGCAAAAGTGAAGGTAGATATCGATGCGATGAATTATCATCATTTCTATGAT ATTCAATTTGCATTTGATAAAGGAAGTATTAAAGCTTTAGGTAACCAAGGTGGAGATACTAACCAAGATGGTAATGGTAA TCAAGTCGGAAGCGATAACCAAGGTGGAAGTAACAACCAAGATGGAACGAATAATCTAAATGAAAACCCAACAGTTGATC CGAAAAATTTAAAAGATGGTCAGTATGATATTGCTTTTAAAGTGTTAAAAGATAAGACAGAAGAAATTTCAATGATGAAT CAATATGTTGTAAGTCCAGCAAGATTAACAGTGAAAGATGGCAAGAAGTATGTTGCAATGACACTGAAAAATAGTGAATG GATTACGAAATTCCAAACAGAAAAGAATGGTGGATTTGCAGATGCGAAAGTAGTAAGTGAAGATAAGGCTACCAATACAA GAGTAGTAGAATTTGAAGCTAATGATTTATTTGCAAAATTAAATGCAAAAGTACAAGTAGATATCGATTCAATGAATTAC CATCATTTCTACGACGTACAAATTCAATTTGATCCGACGAAGATTGGCGCTGTAGGAACGGTAAAAGAAGAGCCAAAAAA AGATCCAAAGAATGAACCGAAAAACCCAGTAACTACACCAAAAGTAGATAATGTAAAAACAGTAGGAACTCCTGATTTTA ACCGGAATGCAGATGGTAAAAAGAAAAACGAAGCTACAAATAATGATTCGAAAAAAGAGAAAAACTCAAAAACTGCAGAT ACAGCACAACTTGGTTTATACATGGTGTTACTGCTAGGTTCACTTGCTTTACTAGTTCGTAAATATAGAGCAGGTAGATT GTAA
Upstream 100 bases:
>100_bases TCTTATTTCAGGTGTTTTCCTAATTCGTAACGTGAAGTTTAGTAAATAAATAAAAAGGAGCGTTATTTCATTGAACAGGT ATCTTAAGATTGTTGTTGCT
Downstream 100 bases:
>100_bases TTTTTGGAGTCTTGATGCATGTTCGCGTGCATCAAGACTTGTTTCATATTGTTTGGAAAGGAGTGGTGATTGAGAGTGAA GAAAATTGCAAGTGTACTAA
Product: cell surface protein
Products: NA
Alternate protein names: Staphylococcal iron-regulated protein D [H]
Number of amino acids: Translated: 907; Mature: 907
Protein sequence:
>907_residues MFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSVSPGTLKVKDGKKKVSFTLKNSSWITKFETD KAGQLVETNVISEDKEKDTRVVEFDVEDVEKILKAKVKVDIDFLNYHHEYDVRIAFDQNSITPIHVEKPDEKEDPANKPD PNETTDPGQKPDQKPDPDQQPNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVTLKSSSLIKNF QTEKDGAFVDAKVVSEDKEKDTRVVEFEIADLSKKLNTKVFIEMASRNYKQTHDVQLVFEQDKLEPIKSEDKQPDGDKQP DGDKQPDGGKQPDGDKQPDGGKQPDGDKQPDGDKQPDVDTIKDGEYSIGFKVLKDKTEEISMMNTYTKSPGVLKVKDGKK YVSFTLTNSSWITKFEFEKNNSFVDASVLSEDKKADTRVVEVEVADLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQ PLDNQGENDNQGGNDNQGGNDNQGGNDNQGGNNNQGGNDSQDGNTAIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKN PGVLKVKDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVLGINKEKDTRVVEVEIDDLSKKLNAKVKVDIDAMNYHHFYD IQFAFDKGSIKALGNQGGDTNQDGNGNQVGSDNQGGSNNQDGTNNLNENPTVDPKNLKDGQYDIAFKVLKDKTEEISMMN QYVVSPARLTVKDGKKYVAMTLKNSEWITKFQTEKNGGFADAKVVSEDKATNTRVVEFEANDLFAKLNAKVQVDIDSMNY HHFYDVQIQFDPTKIGAVGTVKEEPKKDPKNEPKNPVTTPKVDNVKTVGTPDFNRNADGKKKNEATNNDSKKEKNSKTAD TAQLGLYMVLLLGSLALLVRKYRAGRL
Sequences:
>Translated_907_residues MFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSVSPGTLKVKDGKKKVSFTLKNSSWITKFETD KAGQLVETNVISEDKEKDTRVVEFDVEDVEKILKAKVKVDIDFLNYHHEYDVRIAFDQNSITPIHVEKPDEKEDPANKPD PNETTDPGQKPDQKPDPDQQPNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVTLKSSSLIKNF QTEKDGAFVDAKVVSEDKEKDTRVVEFEIADLSKKLNTKVFIEMASRNYKQTHDVQLVFEQDKLEPIKSEDKQPDGDKQP DGDKQPDGGKQPDGDKQPDGGKQPDGDKQPDGDKQPDVDTIKDGEYSIGFKVLKDKTEEISMMNTYTKSPGVLKVKDGKK YVSFTLTNSSWITKFEFEKNNSFVDASVLSEDKKADTRVVEVEVADLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQ PLDNQGENDNQGGNDNQGGNDNQGGNDNQGGNNNQGGNDSQDGNTAIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKN PGVLKVKDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVLGINKEKDTRVVEVEIDDLSKKLNAKVKVDIDAMNYHHFYD IQFAFDKGSIKALGNQGGDTNQDGNGNQVGSDNQGGSNNQDGTNNLNENPTVDPKNLKDGQYDIAFKVLKDKTEEISMMN QYVVSPARLTVKDGKKYVAMTLKNSEWITKFQTEKNGGFADAKVVSEDKATNTRVVEFEANDLFAKLNAKVQVDIDSMNY HHFYDVQIQFDPTKIGAVGTVKEEPKKDPKNEPKNPVTTPKVDNVKTVGTPDFNRNADGKKKNEATNNDSKKEKNSKTAD TAQLGLYMVLLLGSLALLVRKYRAGRL >Mature_907_residues MFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSVSPGTLKVKDGKKKVSFTLKNSSWITKFETD KAGQLVETNVISEDKEKDTRVVEFDVEDVEKILKAKVKVDIDFLNYHHEYDVRIAFDQNSITPIHVEKPDEKEDPANKPD PNETTDPGQKPDQKPDPDQQPNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVTLKSSSLIKNF QTEKDGAFVDAKVVSEDKEKDTRVVEFEIADLSKKLNTKVFIEMASRNYKQTHDVQLVFEQDKLEPIKSEDKQPDGDKQP DGDKQPDGGKQPDGDKQPDGGKQPDGDKQPDGDKQPDVDTIKDGEYSIGFKVLKDKTEEISMMNTYTKSPGVLKVKDGKK YVSFTLTNSSWITKFEFEKNNSFVDASVLSEDKKADTRVVEVEVADLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQ PLDNQGENDNQGGNDNQGGNDNQGGNDNQGGNNNQGGNDSQDGNTAIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKN PGVLKVKDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVLGINKEKDTRVVEVEIDDLSKKLNAKVKVDIDAMNYHHFYD IQFAFDKGSIKALGNQGGDTNQDGNGNQVGSDNQGGSNNQDGTNNLNENPTVDPKNLKDGQYDIAFKVLKDKTEEISMMN QYVVSPARLTVKDGKKYVAMTLKNSEWITKFQTEKNGGFADAKVVSEDKATNTRVVEFEANDLFAKLNAKVQVDIDSMNY HHFYDVQIQFDPTKIGAVGTVKEEPKKDPKNEPKNPVTTPKVDNVKTVGTPDFNRNADGKKKNEATNNDSKKEKNSKTAD TAQLGLYMVLLLGSLALLVRKYRAGRL
Specific function: Involved in heme (porphyrin) scavenging. Binds hemoglobin and almost exclusively free-base protoporphyrin IX. Probably has a role as the central conduit of the isd heme uptake system, i.e., mediates the transfer of the iron-containing nutrient from isdABH
COG id: COG5386
COG function: function code M; Cell surface protein
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 NEAT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019909 - InterPro: IPR006635 - InterPro: IPR017505 [H]
Pfam domain/function: PF05031 NEAT [H]
EC number: NA
Molecular weight: Translated: 101156; Mature: 101156
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50978 NEAT ; PS00050 RIBOSOMAL_L23
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSVSPGTLKVKDG CEEEEEHHHHHHHHHHHHHHHHHCCCCEECCEEEECCCCHHHHHHHHCCCCCCEEEEECC KKKVSFTLKNSSWITKFETDKAGQLVETNVISEDKEKDTRVVEFDVEDVEKILKAKVKVD CEEEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHEEEE IDFLNYHHEYDVRIAFDQNSITPIHVEKPDEKEDPANKPDPNETTDPGQKPDQKPDPDQQ EEEEECCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVTLKSSSLIKNF CCCCCCCCCCEECCHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHH QTEKDGAFVDAKVVSEDKEKDTRVVEFEIADLSKKLNTKVFIEMASRNYKQTHDVQLVFE CCCCCCCEEEEEECCCCCCCCCEEEEEEEHHHHHHCCCEEEEEECCCCCCCCCCEEEEEE QDKLEPIKSEDKQPDGDKQPDGDKQPDGGKQPDGDKQPDGGKQPDGDKQPDGDKQPDVDT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IKDGEYSIGFKVLKDKTEEISMMNTYTKSPGVLKVKDGKKYVSFTLTNSSWITKFEFEKN CCCCCEEECEEEECCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCEEEEEEEECC NSFVDASVLSEDKKADTRVVEVEVADLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQ CCEEEHHHHCCCCCCCCEEEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEEEEECCCCCC PLDNQGENDNQGGNDNQGGNDNQGGNDNQGGNNNQGGNDSQDGNTAIDPNALKDGEYSIG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC FKVLKDKTEEISMMNTYTKNPGVLKVKDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVL EEEECCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCEEEEEEECCCCCEEEEEEE GINKEKDTRVVEVEIDDLSKKLNAKVKVDIDAMNYHHFYDIQFAFDKGSIKALGNQGGDT ECCCCCCCEEEEEEHHHHHHHCCCEEEEEEEEECCEEEEEEEEEECCCCEEEECCCCCCC NQDGNGNQVGSDNQGGSNNQDGTNNLNENPTVDPKNLKDGQYDIAFKVLKDKTEEISMMN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCHHHHHHHH QYVVSPARLTVKDGKKYVAMTLKNSEWITKFQTEKNGGFADAKVVSEDKATNTRVVEFEA HHHCCCEEEEEECCCEEEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEC NDLFAKLNAKVQVDIDSMNYHHFYDVQIQFDPTKIGAVGTVKEEPKKDPKNEPKNPVTTP CCEEEEECCEEEEEEECCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCC KVDNVKTVGTPDFNRNADGKKKNEATNNDSKKEKNSKTADTAQLGLYMVLLLGSLALLVR CCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KYRAGRL HHHCCCC >Mature Secondary Structure MFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSVSPGTLKVKDG CEEEEEHHHHHHHHHHHHHHHHHCCCCEECCEEEECCCCHHHHHHHHCCCCCCEEEEECC KKKVSFTLKNSSWITKFETDKAGQLVETNVISEDKEKDTRVVEFDVEDVEKILKAKVKVD CEEEEEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHEEEE IDFLNYHHEYDVRIAFDQNSITPIHVEKPDEKEDPANKPDPNETTDPGQKPDQKPDPDQQ EEEEECCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVTLKSSSLIKNF CCCCCCCCCCEECCHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHH QTEKDGAFVDAKVVSEDKEKDTRVVEFEIADLSKKLNTKVFIEMASRNYKQTHDVQLVFE CCCCCCCEEEEEECCCCCCCCCEEEEEEEHHHHHHCCCEEEEEECCCCCCCCCCEEEEEE QDKLEPIKSEDKQPDGDKQPDGDKQPDGGKQPDGDKQPDGGKQPDGDKQPDGDKQPDVDT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IKDGEYSIGFKVLKDKTEEISMMNTYTKSPGVLKVKDGKKYVSFTLTNSSWITKFEFEKN CCCCCEEECEEEECCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCEEEEEEEECC NSFVDASVLSEDKKADTRVVEVEVADLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQ CCEEEHHHHCCCCCCCCEEEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEEEEECCCCCC PLDNQGENDNQGGNDNQGGNDNQGGNDNQGGNNNQGGNDSQDGNTAIDPNALKDGEYSIG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC FKVLKDKTEEISMMNTYTKNPGVLKVKDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVL EEEECCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCEEEEEEECCCCCEEEEEEE GINKEKDTRVVEVEIDDLSKKLNAKVKVDIDAMNYHHFYDIQFAFDKGSIKALGNQGGDT ECCCCCCCEEEEEEHHHHHHHCCCEEEEEEEEECCEEEEEEEEEECCCCEEEECCCCCCC NQDGNGNQVGSDNQGGSNNQDGTNNLNENPTVDPKNLKDGQYDIAFKVLKDKTEEISMMN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCHHHHHHHH QYVVSPARLTVKDGKKYVAMTLKNSEWITKFQTEKNGGFADAKVVSEDKATNTRVVEFEA HHHCCCEEEEEECCCEEEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEC NDLFAKLNAKVQVDIDSMNYHHFYDVQIQFDPTKIGAVGTVKEEPKKDPKNEPKNPVTTP CCEEEEECCEEEEEEECCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCC KVDNVKTVGTPDFNRNADGKKKNEATNNDSKKEKNSKTADTAQLGLYMVLLLGSLALLVR CCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KYRAGRL HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA