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The map label for this gene is tnpC [H]

Identifier: 218905653

GI number: 218905653

Start: 4293798

End: 4294070

Strand: Reverse

Name: tnpC [H]

Synonym: BCAH820_4538

Alternate gene names: 218905653

Gene position: 4294070-4293798 (Counterclockwise)

Preceding gene: 218905654

Following gene: 218905652

Centisome position: 80.98

GC content: 32.97

Gene sequence:

>273_bases
ATGGCACTAAAAAAAGAGAAGATTAATTTTAATTCCGTTTCACAAAAAGCAGATGTTTCAAAGTCATGGCTTTACAAACA
GGAAGACATTAGAACTAGAATAGAGACATTAAGAGGGATGCAAATAAGTGAGTTAGTCCCCCGTAAACAAAGTAAAAGCC
CTCGTTCAGAGGATGTATTAATAAAGACCTTAAAAAACCGTATAAAGGCACTAGAAGAAGAAAACAAACAATTAAAGGAT
CAAGTTCAAATATTACATGGCAAGCTATTTTAG

Upstream 100 bases:

>100_bases
AATTAAGATGACTAGACAGAGTAACACAACTGCGATAATTCAACTATCAAAAGAAAAGTCGGAAAAAACAAGAATCAGAG
TTGAAAAGACAATTTCAGAG

Downstream 100 bases:

>100_bases
CAGCATTATGCATCCTAAGATGTATCTCTAATTTTAATACAGAAGTGCATTGATAATCTGAACTTCTGTTTTTCTCGTTG
GGATAACGGGACACTTTGGT

Product: transposase C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MALKKEKINFNSVSQKADVSKSWLYKQEDIRTRIETLRGMQISELVPRKQSKSPRSEDVLIKTLKNRIKALEEENKQLKD
QVQILHGKLF

Sequences:

>Translated_90_residues
MALKKEKINFNSVSQKADVSKSWLYKQEDIRTRIETLRGMQISELVPRKQSKSPRSEDVLIKTLKNRIKALEEENKQLKD
QVQILHGKLF
>Mature_89_residues
ALKKEKINFNSVSQKADVSKSWLYKQEDIRTRIETLRGMQISELVPRKQSKSPRSEDVLIKTLKNRIKALEEENKQLKDQ
VQILHGKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10581; Mature: 10449

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKKEKINFNSVSQKADVSKSWLYKQEDIRTRIETLRGMQISELVPRKQSKSPRSEDVL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHH
IKTLKNRIKALEEENKQLKDQVQILHGKLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALKKEKINFNSVSQKADVSKSWLYKQEDIRTRIETLRGMQISELVPRKQSKSPRSEDVL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHH
IKTLKNRIKALEEENKQLKDQVQILHGKLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA