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The map label for this gene is yvaD [H]

Identifier: 218904440

GI number: 218904440

Start: 3172834

End: 3173253

Strand: Reverse

Name: yvaD [H]

Synonym: BCAH820_3324

Alternate gene names: 218904440

Gene position: 3173253-3172834 (Counterclockwise)

Preceding gene: 218904441

Following gene: 218904436

Centisome position: 59.84

GC content: 30.24

Gene sequence:

>420_bases
TTGAATCGATTAAAGTATTTTTTCCTTATTACTGATGTTGGGTTTGTTATATATTGGCTCATAACAATTTTTCATATGAT
TCCGCAAGAATATTTGTTTAAAGATTATGAAGAGCCTATTTTAGTAGCATGGAATTGGTCTTTTTTGCCTCTAGATTTGT
TAATCTCGTTAACGGGATTTCTAAGTTTATATTTACATTCTAAACAAAAACATATTTGGAGCCACTTTGCATTCCTATCA
TTAATTTTAACTTTTTGCTCAGGGTTACAAGCTCTAGCATTTTGGACAATCCGTTTAGATTTTGATATGTCTTGGTGGAT
TCCTAATTTATATTTATTAGTTTATCCATGCTTCTTTTTAAAAAGTGTTTGGAGAGAGTGTGGATGGTATGAGATTAACG
CGAGAAAAGAATTCATGTAA

Upstream 100 bases:

>100_bases
TAGTAGCAATTCTTTTTATTTTAATTGGAGTCGTAATTTTAAATTTTAATAGTACGGCACATGAAGCGAAGAAAAAAGAA
ATGGTGGAGGAACGTATACA

Downstream 100 bases:

>100_bases
TATAGATAAAATTTTAAGCACATTCGAATTTTAGATTCTACAACATTTTAGCTTCTAGATCAGTTTTTTCGCCAGCCATA
CAGCAGAAGTTAAAACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNRLKYFFLITDVGFVIYWLITIFHMIPQEYLFKDYEEPILVAWNWSFLPLDLLISLTGFLSLYLHSKQKHIWSHFAFLS
LILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFLKSVWRECGWYEINARKEFM

Sequences:

>Translated_139_residues
MNRLKYFFLITDVGFVIYWLITIFHMIPQEYLFKDYEEPILVAWNWSFLPLDLLISLTGFLSLYLHSKQKHIWSHFAFLS
LILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFLKSVWRECGWYEINARKEFM
>Mature_139_residues
MNRLKYFFLITDVGFVIYWLITIFHMIPQEYLFKDYEEPILVAWNWSFLPLDLLISLTGFLSLYLHSKQKHIWSHFAFLS
LILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFLKSVWRECGWYEINARKEFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020348
- ProDom:   PD082409 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16989; Mature: 16989

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLKYFFLITDVGFVIYWLITIFHMIPQEYLFKDYEEPILVAWNWSFLPLDLLISLTGF
CCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
LSLYLHSKQKHIWSHFAFLSLILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHH
KSVWRECGWYEINARKEFM
HHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MNRLKYFFLITDVGFVIYWLITIFHMIPQEYLFKDYEEPILVAWNWSFLPLDLLISLTGF
CCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
LSLYLHSKQKHIWSHFAFLSLILTFCSGLQALAFWTIRLDFDMSWWIPNLYLLVYPCFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHH
KSVWRECGWYEINARKEFM
HHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]