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The map label for this gene is yndE [H]

Identifier: 218904275

GI number: 218904275

Start: 2994182

End: 2995273

Strand: Reverse

Name: yndE [H]

Synonym: BCAH820_3159

Alternate gene names: 218904275

Gene position: 2995273-2994182 (Counterclockwise)

Preceding gene: 218904276

Following gene: 218904274

Centisome position: 56.49

GC content: 34.52

Gene sequence:

>1092_bases
GTGATTACTATACCTAAAGACCGAATAACAACTGCACAAGCAGTTGTTATTATTGTAAATTACATACTGGGAACAGGAAT
CCTCACTCTGCCCAGAGCATCTGTAGAAAAAGTGAAAACACCAGATGTATGGTTAAGTGTGATATTAGGTGGGATACTCG
CAATGGTTTCAGGAGTAATTATGGTCAAACTAAGTCAGCAGTTTCCAGATAAAACATTTTATCAATACAGTCAAGATATT
GTAGGGAAATGGATAGGCAGGTTGCTTAGTTTTCTTATTATAGGGTATTTTCTTACAACTTCAGCCTTTCAAATTCGTTC
AATGGCAGAAGTAATAAGCTTTTTTTTGCTAGAAGGAACCCCCACATGGGCTATTGTTATGCCTTTTATGTGGATAGGTC
TCTATTTGATTATGAGTGGTATTAACTCGATTGCACGGATGTTTGAAATAATATTTCCTATTACTTTCTTTATTTTTTTA
CTCATTTCCTTTATGAGTATAGGGATATTCGAGATAGATAATCTCCGTCCCGTATTAGGTTTGGGAATTAAACCGGTGTT
AGATGGGGTAAAAACAACGTCTCTCGCATATACAGGTCCAGAAATTATGTTAATTCTTTTGGTGTTTATGGAACAACGAA
AGAAAGCAGTAAAAGCTATTTTAGTTGGAATTTCTATTCCGTTAGTCTTTTATGTAATAACTGTTGTAATGGTCATTGGT
GCATTATCAATTGATGGGGTTGTAACAAGAACATGGCCGACAATTGACCTTATGCGCAGTTTTGAAATTTCTGGTTTAAT
ATTTGAACGTTTTGAATCTTTACTGCTTGTAATATGGATTATGCAAATATTTGCTACCTATACAATTAGTTACTATGCAG
CTGCATTAGGATTGGCACAACTCTTTAAAAAGAGTATTCATCCGTTTATTTTTGCTTTGATTCCAATCATTTACATCATT
GCTATGACTTCGAAAAATATAAATGATTTGCTTAAACTGGGGGATATGCTCGGTAATGCTGCTTTATTTTTATTTGGTTT
ACTGCCACTGCTTCTTCTTATTATTACGCGATTAAAAGGAGGAGTAGTGTGA

Upstream 100 bases:

>100_bases
TTCGCATGCCATTAAAAATAATGAGACGTCGACCGAAAATAATGCATACCAAAAAAACTAACCGCAAAAGGTAGCTGATG
ACGAAAGGAAGTGGGGTTCA

Downstream 100 bases:

>100_bases
AACATAAATTTAATTATATGCGGTTCTATTTGGCTTTGTTAGGGACGCTTTTGCTTCTATTTTTAACAGGATGTTGGAGC
AGTAAAGAAGTAGAAGAGTT

Product: spore germination protein A2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MITIPKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPDKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFL
LISFMSIGIFEIDNLRPVLGLGIKPVLDGVKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLVFYVITVVMVIG
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQLFKKSIHPFIFALIPIIYII
AMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIITRLKGGVV

Sequences:

>Translated_363_residues
MITIPKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPDKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFL
LISFMSIGIFEIDNLRPVLGLGIKPVLDGVKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLVFYVITVVMVIG
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQLFKKSIHPFIFALIPIIYII
AMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIITRLKGGVV
>Mature_363_residues
MITIPKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVIMVKLSQQFPDKTFYQYSQDI
VGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGTPTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFL
LISFMSIGIFEIDNLRPVLGLGIKPVLDGVKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLVFYVITVVMVIG
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQLFKKSIHPFIFALIPIIYII
AMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIITRLKGGVV

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40473; Mature: 40473

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIPKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVI
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MVKLSQQFPDKTFYQYSQDIVGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFLLISFMSIGIFEIDNLRPVLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHH
LGIKPVLDGVKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLVFYVITVVMVIG
CCCHHHHCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQ
HHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIITRLKG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVV
CCC
>Mature Secondary Structure
MITIPKDRITTAQAVVIIVNYILGTGILTLPRASVEKVKTPDVWLSVILGGILAMVSGVI
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MVKLSQQFPDKTFYQYSQDIVGKWIGRLLSFLIIGYFLTTSAFQIRSMAEVISFFLLEGT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTWAIVMPFMWIGLYLIMSGINSIARMFEIIFPITFFIFLLISFMSIGIFEIDNLRPVLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHH
LGIKPVLDGVKTTSLAYTGPEIMLILLVFMEQRKKAVKAILVGISIPLVFYVITVVMVIG
CCCHHHHCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSIDGVVTRTWPTIDLMRSFEISGLIFERFESLLLVIWIMQIFATYTISYYAAALGLAQ
HHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKKSIHPFIFALIPIIYIIAMTSKNINDLLKLGDMLGNAALFLFGLLPLLLLIITRLKG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]