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The map label for this gene is gerAA [H]

Identifier: 218904276

GI number: 218904276

Start: 2995300

End: 2996874

Strand: Reverse

Name: gerAA [H]

Synonym: BCAH820_3160

Alternate gene names: 218904276

Gene position: 2996874-2995300 (Counterclockwise)

Preceding gene: 218904277

Following gene: 218904275

Centisome position: 56.52

GC content: 36.32

Gene sequence:

>1575_bases
ATGAGTTGGTGGAAGTCAAGAGATAAACAAGTGAAAAAAAATATTATTCAAAGTAAAACGAAACAAGAGCATAAACCTTC
TCAAAATACAACCGTTCATTTCACAAATGATTTTGCCTCTAACTTAGAACTTATAAAGCAACAAATCGGACATAATTCTG
ACGTTCGCTTTCGGGAGTTTAATATTGGACGCACAGATATTCAGGCTGGAATCATTTTTGTTGATGGTCTATCAGATAAA
GAGATAATTGACAAACATATTATGAAATTACTAATGGATGATTTTTCTGACGAATATAAAAATGAATCTTATTATGTGGA
GGGGACTGTTTCAAAAGAATATATTAAAAATAAAGTTCTTACAATTAGTGAAGTAGCAGAAGTTCAGTACATAAAAGATT
TGATACCCAAAGTATTGATAGGTTCAACAGCTCTTTTAATTGATGGTTTAGCAGATGTGTTTATTCTTGGTACAACAAAA
GCAAATAAACGAAACATGGAAGAACCAGTATCGGAGGCATTAGTCAGAGGTCCACGGGTCGGTTTTACTGAAGTATTAAG
TGATAATACTTCACTTTTGCGACGGCATTGTGCGGATGAGAACTTATCATTAGTGAAGCTACCAGTAGGAGAACGTGCAA
AGAAAGAGCTAGTTGTCGCATTTATTAAAGATCTTGCTAGTACAGAATTGGTGGAAGAAATAAAAAATAGAATTCAGAAA
ATTGACATAGACAGTGTACTCGAATCTGGTTACATAGAGCAACTCATTGAAGATAATTATCTCAGTCCTTTTCCGCAGAT
TCAAAATACAGAACGACCTGATCGTGTTATTAGTGCTTTGATGGAAGGTCGAGTAGCTATTTTGTTAGATGGAACACCAT
TTGTTTTAATTGCTCCTGTTACATTTAGTATGCTACTGCAATCACCAGAAGATTATTATGAAAGGTGGCTTCCTGGTACG
CTTCTCCGCTTATTACGCTTCATGACAGCTTTTGTTTCATTATTTGCTCCAGCACTGTATATTTCTTTCATTTCATTTCA
TCCAGGATTAATTCCCACTAAGCTCGCTATTTCTATTCTCGGATCGAGAGAAGGAGTTCCTTTTCCCGCTTTAATAGAAG
CGTTAATTATGGAAGTAGCTATCGAAGTTTTACGAGAAGCAGGTTTACGTCTGCCTAAACCAATTGGACCTGCAATGGGA
ATTGTGGGCGGTTTAATAATTGGTCAGGCTGCCGTAGAAGCAGGAATTGTTAGTCCAATAATGGTTATCGTTGTTGCGGT
AACAGCTATTTCTTCTTTTACTATCCCGCAATATAGTGTGGGAATTACGTTACGCATTCTTCGTTTTGTAGCTATGTTTT
GTGCTGCGATATTTGGCTTGTATGGAGTTATTCTCTTCTTTCTTTTACTTTGCAGTCATTTAGTGAAACTGAAAAGTTTT
GGCGTTCCTTATACTAGCCCTGCTGTTCCGTACCGATTTAGTGACTGGAAAGATTTTATGGTTCGCATGCCATTAAAAAT
AATGAGACGTCGACCGAAAATAATGCATACCAAAAAAACTAACCGCAAAAGGTAG

Upstream 100 bases:

>100_bases
ATTGGAAAGTCTTTGTACAAGCTTTTATCTTGTTTTTAATTCCGTATACTATCTCAAGATTTTTTCATTGGGTTCGTATG
TCAGAGAAAGAGTGGGAAGA

Downstream 100 bases:

>100_bases
CTGATGACGAAAGGAAGTGGGGTTCAGTGATTACTATACCTAAAGACCGAATAACAACTGCACAAGCAGTTGTTATTATT
GTAAATTACATACTGGGAAC

Product: spore germination protein GerAA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MSWWKSRDKQVKKNIIQSKTKQEHKPSQNTTVHFTNDFASNLELIKQQIGHNSDVRFREFNIGRTDIQAGIIFVDGLSDK
EIIDKHIMKLLMDDFSDEYKNESYYVEGTVSKEYIKNKVLTISEVAEVQYIKDLIPKVLIGSTALLIDGLADVFILGTTK
ANKRNMEEPVSEALVRGPRVGFTEVLSDNTSLLRRHCADENLSLVKLPVGERAKKELVVAFIKDLASTELVEEIKNRIQK
IDIDSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPVTFSMLLQSPEDYYERWLPGT
LLRLLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISILGSREGVPFPALIEALIMEVAIEVLREAGLRLPKPIGPAMG
IVGGLIIGQAAVEAGIVSPIMVIVVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSF
GVPYTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTNRKR

Sequences:

>Translated_524_residues
MSWWKSRDKQVKKNIIQSKTKQEHKPSQNTTVHFTNDFASNLELIKQQIGHNSDVRFREFNIGRTDIQAGIIFVDGLSDK
EIIDKHIMKLLMDDFSDEYKNESYYVEGTVSKEYIKNKVLTISEVAEVQYIKDLIPKVLIGSTALLIDGLADVFILGTTK
ANKRNMEEPVSEALVRGPRVGFTEVLSDNTSLLRRHCADENLSLVKLPVGERAKKELVVAFIKDLASTELVEEIKNRIQK
IDIDSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPVTFSMLLQSPEDYYERWLPGT
LLRLLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISILGSREGVPFPALIEALIMEVAIEVLREAGLRLPKPIGPAMG
IVGGLIIGQAAVEAGIVSPIMVIVVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSF
GVPYTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTNRKR
>Mature_523_residues
SWWKSRDKQVKKNIIQSKTKQEHKPSQNTTVHFTNDFASNLELIKQQIGHNSDVRFREFNIGRTDIQAGIIFVDGLSDKE
IIDKHIMKLLMDDFSDEYKNESYYVEGTVSKEYIKNKVLTISEVAEVQYIKDLIPKVLIGSTALLIDGLADVFILGTTKA
NKRNMEEPVSEALVRGPRVGFTEVLSDNTSLLRRHCADENLSLVKLPVGERAKKELVVAFIKDLASTELVEEIKNRIQKI
DIDSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPVTFSMLLQSPEDYYERWLPGTL
LRLLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISILGSREGVPFPALIEALIMEVAIEVLREAGLRLPKPIGPAMGI
VGGLIIGQAAVEAGIVSPIMVIVVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSFG
VPYTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTNRKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 58993; Mature: 58862

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWWKSRDKQVKKNIIQSKTKQEHKPSQNTTVHFTNDFASNLELIKQQIGHNSDVRFREF
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEE
NIGRTDIQAGIIFVDGLSDKEIIDKHIMKLLMDDFSDEYKNESYYVEGTVSKEYIKNKVL
CCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCH
TISEVAEVQYIKDLIPKVLIGSTALLIDGLADVFILGTTKANKRNMEEPVSEALVRGPRV
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCCC
GFTEVLSDNTSLLRRHCADENLSLVKLPVGERAKKELVVAFIKDLASTELVEEIKNRIQK
CHHHHHCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDIDSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEHHH
TFSMLLQSPEDYYERWLPGTLLRLLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISIL
HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GSREGVPFPALIEALIMEVAIEVLREAGLRLPKPIGPAMGIVGGLIIGQAAVEAGIVSPI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MVIVVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVPYTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTNRKR
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SWWKSRDKQVKKNIIQSKTKQEHKPSQNTTVHFTNDFASNLELIKQQIGHNSDVRFREF
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEE
NIGRTDIQAGIIFVDGLSDKEIIDKHIMKLLMDDFSDEYKNESYYVEGTVSKEYIKNKVL
CCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCH
TISEVAEVQYIKDLIPKVLIGSTALLIDGLADVFILGTTKANKRNMEEPVSEALVRGPRV
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCCC
GFTEVLSDNTSLLRRHCADENLSLVKLPVGERAKKELVVAFIKDLASTELVEEIKNRIQK
CHHHHHCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDIDSVLESGYIEQLIEDNYLSPFPQIQNTERPDRVISALMEGRVAILLDGTPFVLIAPV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEHHH
TFSMLLQSPEDYYERWLPGTLLRLLRFMTAFVSLFAPALYISFISFHPGLIPTKLAISIL
HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GSREGVPFPALIEALIMEVAIEVLREAGLRLPKPIGPAMGIVGGLIIGQAAVEAGIVSPI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MVIVVAVTAISSFTIPQYSVGITLRILRFVAMFCAAIFGLYGVILFFLLLCSHLVKLKSF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVPYTSPAVPYRFSDWKDFMVRMPLKIMRRRPKIMHTKKTNRKR
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]