Click here to switch to the map view.

The map label for this gene is lstR

Identifier: 218902229

GI number: 218902229

Start: 1063033

End: 1063440

Strand: Direct

Name: lstR

Synonym: BCAH820_1111

Alternate gene names: NA

Gene position: 1063033-1063440 (Clockwise)

Preceding gene: 218902228

Following gene: 218902230

Centisome position: 20.05

GC content: 38.48

Gene sequence:

>408_bases
ATGGAAGATCGATTAAAAGGCTTGCGAAAATCAATGGAGAACACAACTTTTAAACATTTGAGTTTTTCTGATCAGCACCA
GAAGCGGGTGCGTGAAAAAATCAATCAATCGTCCGAAAAAGAAGAAGACATCCTTTTAGCAGTGTTGCAACTTCTTATGA
ATGAAAAAACAGGTTATGAATTGGTGCAGTTACTACGGGGGAGAGGGATTCAAACATTTGAAGGTAATGAAGGGTCTCTA
TACACTTTGTTACATCGTCTAGAGCAGAATCGCTTTATCCAATCTAGCTGGGACCACGAAGGAGCTAAATATTATCAATT
AAATGATAAAGGAAACAAGATGCTGCGAAAGGCAGAGAAGAATGCTACGAAGGCACGATTTATATTAAAAGGCTTAGTAC
AGGAGTGA

Upstream 100 bases:

>100_bases
AAAGAGATTGCTACGGTAATAGAAGTGAAGGGAAACACGATAAAAACGAGGCTGAAAAAAGCAAAGGAGCTTTTGAAGAA
AGGATTGGAGGAGTAATCAA

Downstream 100 bases:

>100_bases
GAAAAAATTGAATAAAAAAAGGGAGCGTTTTTTAAAAGAAGTTACGAACCATATTAAATCAAAAGAAGCGAAGGACTTGG
TGGCAGCGGAACTAGACTTT

Product: lineage-specific thermal regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator PadR Family; PadR Family Transcriptional Regulator

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYELVQLLRGRGIQTFEGNEGSL
YTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE

Sequences:

>Translated_135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYELVQLLRGRGIQTFEGNEGSL
YTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE
>Mature_135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYELVQLLRGRGIQTFEGNEGSL
YTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15884; Mature: 15884

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
LVQLLRGRGIQTFEGNEGSLYTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEK
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH
NATKARFILKGLVQE
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
LVQLLRGRGIQTFEGNEGSLYTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEK
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH
NATKARFILKGLVQE
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA