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The map label for this gene is gerYC

Identifier: 218901951

GI number: 218901951

Start: 791677

End: 792489

Strand: Reverse

Name: gerYC

Synonym: BCAH820_0833

Alternate gene names: NA

Gene position: 792489-791677 (Counterclockwise)

Preceding gene: 218901952

Following gene: 218901950

Centisome position: 14.95

GC content: 33.09

Gene sequence:

>813_bases
ATGCGTGTTGTCCTATTTGGAAAAGCATTTGGCGAACATGGACTTGGGGATGTTATTAACAACTTACAACGTGATCCTAA
CATTGGCCGTGATGTACAACTAGCACTTGTAGATGGTTCATCAGAAGAATTACTGAAACATGTGAGAACAAATGGATCTC
TATATCTATCTGAATTACTGGAACAAAATATAAAAACCGAGACAATCCCTCGGACAGCTTTAAATATTTTTTTATATAAC
TTCTATTCATCTGGATGTGATCCATTTCTTCCTTACATTCAAGTATCAGAAGACAAATCTGCTTCTATTAAAGGGCTCGC
TTTTTTAAAAAAAGATAAAGTCGCTATGTATACGGATAGGAAAAGGTCTTTTTTATTTAAATTACTCATTAATCCAACGA
AAAATGGACGTTACGAAGTTCCGATACGTCAAGGTAAACATAAAGGAGTAATTGCTACTCAAAACTTATCTGGAAATAGT
GTATGCTCTCTTTCGTCAAACGGTGATATTCCGAAAGTTAACATACACTTAAAGTTAAATGGACTTGTAAAAAATGCCCC
TAGCTGGCTTGATTTATCAAAGGGTAAAAATGTAACTTACGTAAAAAGACATATAGAAAAAATGCTTGAAAAGGATTTAA
ACGAATTAATAAAACAATTCCAAGAAAATAAAATCGATCCAATAGGAATACGTGAAGAAATTCGTAGTCATTCAAGAAAA
TGGAGCATGAAACAAATTCAAGATATGTATCCTAACGTAGACATTGCTGTTAATGTAAAAATTAATGTCGTACAATCTGG
TATCGGCGAATAG

Upstream 100 bases:

>100_bases
ACAATCTAAACCCGAAACTCAATCCACTCATGCAGGTACAATTGAAACAATCTCTTCCCTTCTAAACGCCAAATCTCCAC
ATACGATTGCTGTAGGTCAA

Downstream 100 bases:

>100_bases
TGAGGTGCTATCATGGCTGGACAAGATAAAACACATACTGTTTCCCCTTATTTCACATTCCTTCTATTACACTCCCTTCA
AATTGGAGTAGGAGTGTTGG

Product: spore germination protein GerYC

Products: NA

Alternate protein names: Germination Protein Ger(X)C Family; Spore Germination B3 GerAC Family Protein; Spore Germination Protein GerHC; GerC Family Spore Germination Protein; Spore Germination Protein QC; Spore Germination Protein GerA; Spore Germination Protein GerC Family; Spore Germination Protein GerAC; Spore Germination Protein C

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRVVLFGKAFGEHGLGDVINNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSELLEQNIKTETIPRTALNIFLYN
FYSSGCDPFLPYIQVSEDKSASIKGLAFLKKDKVAMYTDRKRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNS
VCSLSSNGDIPKVNIHLKLNGLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSRK
WSMKQIQDMYPNVDIAVNVKINVVQSGIGE

Sequences:

>Translated_270_residues
MRVVLFGKAFGEHGLGDVINNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSELLEQNIKTETIPRTALNIFLYN
FYSSGCDPFLPYIQVSEDKSASIKGLAFLKKDKVAMYTDRKRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNS
VCSLSSNGDIPKVNIHLKLNGLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSRK
WSMKQIQDMYPNVDIAVNVKINVVQSGIGE
>Mature_270_residues
MRVVLFGKAFGEHGLGDVINNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSELLEQNIKTETIPRTALNIFLYN
FYSSGCDPFLPYIQVSEDKSASIKGLAFLKKDKVAMYTDRKRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNS
VCSLSSNGDIPKVNIHLKLNGLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSRK
WSMKQIQDMYPNVDIAVNVKINVVQSGIGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30509; Mature: 30509

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVLFGKAFGEHGLGDVINNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSELL
CEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHH
EQNIKTETIPRTALNIFLYNFYSSGCDPFLPYIQVSEDKSASIKGLAFLKKDKVAMYTDR
HCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEECCCEEEEECH
KRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNSVCSLSSNGDIPKVNIHLKLN
HHHHEEHEEECCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEEC
GLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSRK
CEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
WSMKQIQDMYPNVDIAVNVKINVVQSGIGE
CCHHHHHHHCCCCEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MRVVLFGKAFGEHGLGDVINNLQRDPNIGRDVQLALVDGSSEELLKHVRTNGSLYLSELL
CEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHH
EQNIKTETIPRTALNIFLYNFYSSGCDPFLPYIQVSEDKSASIKGLAFLKKDKVAMYTDR
HCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEECCCEEEEECH
KRSFLFKLLINPTKNGRYEVPIRQGKHKGVIATQNLSGNSVCSLSSNGDIPKVNIHLKLN
HHHHEEHEEECCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEEC
GLVKNAPSWLDLSKGKNVTYVKRHIEKMLEKDLNELIKQFQENKIDPIGIREEIRSHSRK
CEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
WSMKQIQDMYPNVDIAVNVKINVVQSGIGE
CCHHHHHHHCCCCEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA