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The map label for this gene is tsr [C]

Identifier: 218901770

GI number: 218901770

Start: 596340

End: 598322

Strand: Direct

Name: tsr [C]

Synonym: BCAH820_0631

Alternate gene names: 218901770

Gene position: 596340-598322 (Clockwise)

Preceding gene: 218901769

Following gene: 218901771

Centisome position: 11.25

GC content: 34.75

Gene sequence:

>1983_bases
ATGCAAAAAATATTTAACTGGGTTAAATGTATGAGTATCAAGAAAAAATTAATCATTTCATTTTTTCTTATTTTAACTAT
ACCAGGACTTATTATCGGTGGTGTTTCATATCAAACTGCCAAAACAAATTTTGAACAACAAATCACAGGTAAAGCAAAGG
AAAATATTTCGATTTTAAATACTGTTATTTCTCAAAATATAGAAGAGAAATTTGTTGATGCAGCATACTTTGCGGACATC
TTAACAGAGGATACATATCCAAACGGACAAGAAGAAATAGTAAGAACGAAATTAGCGCAATATATAAAACTTCATCCAGA
AGTAGAAGGTATTTACATTGGAACGCAGACGGGAAAGTTTATAAGAGAACCATTTATCCAAATGTCTGATGGGTATAATC
CAACAGATAGAGATTGGTATAAAGAAGCACATGAAAATAAAGGGAAAGTAATTGTTACTGCGCCATATCAATCAGCATCT
ACAAAAAATATGGTAGTGACAATTGCTAAAGAAGTAAAAGATGGTAAAGGTGTTATAGGGATTAACTTAAATTTAGATAA
CATTTTAAAAATCTCCAAAATGATTAATATTGGGGAAAAAGGTTATGCAGTTATTTTAGATCAAAATAAGCAAATTGTTA
GTCATCCATCTAGAAAACCAGGTGCAAAAGTTACTGATCCTTGGATTAAACCAATTTATGAAGATAAACAAGGAAATGTT
GCTTATACAGAAAAAGATGATAAAAAGAATTTAATCTTTGCAACAAATGAGAAAACGGGCTGGAAAGTAGTTGGAGTCAT
GTTTGATGAAGAAATTATCCAAGCTGCGAATCCAGTGTTTTATAAGACTTTTATTGTCATTGCTATCGCTATTGTATTTG
GCAGTGTATTAATTTATTTCATCACAAAGTCTATTACAAGACCATTAAGAAAAATAGCTGACTCGGCATATAAAATTAGT
AAGGGAGATTTAACAGAGAAAATTACAATTCATTCCAAGGATGATATAGGGAAATTAGGGAATTCCTTTAATGAAATGTC
TGCCTCTTTACAAGATGTGATTACTCAAATTAGTTTTTCAGCAGAGCATGTCGCTGCATCGGCTGAAGAGTTAACAGCGA
GCGTACAGCAAGCAAATGATGCGACAGATCAAATTACAATTGCAATGGAACAAGTATCAGGTGGGGCTGAATCACAAAGT
CAAGGTGTTGAAGAAGGTGCGGCTACATTACAACAAGTAAATGCAGCAATTCAAGATGTAAACGGAAGCGCGGAATCGAT
TTCTATCTCCTCATTACATGCGAGAGAGCGAGCTAAAGAGGGGGAAGACTTGGTTGAACAAACTGCAATACAAATGCAGT
CTATTTCTAGGTCGGTATCCGAGTCGGATGCTATTATTAAACTTCTTGATGAGAAATCAAAGCAGGTAGGAGCTATTTCT
GAAGCAATTCAAAATATTGCTACTCAAACGAACCTTTTAGCTTTAAATGCGGCTATTGAAGCAGCAAGAGCAGGTGAACA
GGGCCGAGGGTTTGCTATTGTAGCAGATGAGGTTAGAAAATTAGCGGAGCAATCAGGAGAATCATCTGGAGAGATTGCGA
ATTTAATTGCAGAAATTAAGGCTGATATTGAACATACTGTTAAGGCGATGGATAATGTGAATGGAGAAGTTCAACAAGGT
CTTGATGTTGTAACAAAAACGAAAGTAAGTTTTACGGAAATTTTAAGTTCTACTACACATATTGTTTCTCAAGTGAATGA
AATGGTAGAAACAACGAAGAGAATTGCTGGAGATGCAAATGAAGTGACAAATGCTATTGATGAAATTGCAGCGGCTGCAG
AAGAAAATACGGCTAGTATGCAAAGTGTTGCTGCTTCAACAGAAGAACAAGTGAATTCAATGGAAGAAATTAGTTCAGCT
TCGCAAAACTTAGCTGAGATGGCCGAAGAACTACAAGCGATGACTAGTAAATTTAAAGTATAA

Upstream 100 bases:

>100_bases
TAATTGACAAAAATATTACATGTTATCATTATATATTGTTTTATATATGTCACTTGTATAAAATTACACAAGTATTCACA
TTACATAAAGGAGGCTTATT

Downstream 100 bases:

>100_bases
TAACAGCAGATAAGTAAGGTGAGAATAATATCACCTTACTTATTTTTCTATTCAGCAATTAGGGGAGTCATTAACGGGAT
GAAAAAAAGGAAAAGACTAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEIIQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNAAIQDVNGSAESISISSLHARERAKEGEDLVEQTAIQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV

Sequences:

>Translated_660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEIIQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNAAIQDVNGSAESISISSLHARERAKEGEDLVEQTAIQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV
>Mature_660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEIIQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNAAIQDVNGSAESISISSLHARERAKEGEDLVEQTAIQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=382, Percent_Identity=29.5811518324607, Blast_Score=133, Evalue=4e-32,
Organism=Escherichia coli, GI1787690, Length=379, Percent_Identity=29.5514511873351, Blast_Score=122, Evalue=9e-29,
Organism=Escherichia coli, GI1788194, Length=361, Percent_Identity=27.1468144044321, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1788195, Length=320, Percent_Identity=30.9375, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1789453, Length=402, Percent_Identity=25.1243781094527, Blast_Score=110, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71966; Mature: 71966

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHH
TVISQNIEEKFVDAAYFADILTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
IREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSASTKNMVVTIAKEVKDGKGVIG
HHCCHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCEEE
INLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
EECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCE
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEIIQAANPVFYKTFIVIAIAIVFGSVLIYF
EEECCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ITKSITRPLRKIADSAYKISKGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHCC
AEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQSQGVEEGAATLQQVNAAIQDV
HHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHC
NGSAESISISSLHARERAKEGEDLVEQTAIQMQSISRSVSESDAIIKLLDEKSKQVGAIS
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ADIEHTVKAMDNVNGEVQQGLDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDAN
HHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSASQNLAEMAEELQAMTSKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHH
TVISQNIEEKFVDAAYFADILTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
IREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSASTKNMVVTIAKEVKDGKGVIG
HHCCHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCEEE
INLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQGNV
EECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCE
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEIIQAANPVFYKTFIVIAIAIVFGSVLIYF
EEECCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ITKSITRPLRKIADSAYKISKGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHCC
AEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQSQGVEEGAATLQQVNAAIQDV
HHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHC
NGSAESISISSLHARERAKEGEDLVEQTAIQMQSISRSVSESDAIIKLLDEKSKQVGAIS
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ADIEHTVKAMDNVNGEVQQGLDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDAN
HHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSASQNLAEMAEELQAMTSKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA