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The map label for this gene is hypE [C]

Identifier: 218884774

GI number: 218884774

Start: 1354785

End: 1355780

Strand: Reverse

Name: hypE [C]

Synonym: DKAM_1463

Alternate gene names: 218884774

Gene position: 1355780-1354785 (Counterclockwise)

Preceding gene: 218884775

Following gene: 218884773

Centisome position: 99.31

GC content: 45.78

Gene sequence:

>996_bases
ATGGATAAGACCGGGAAGTTTTCATGGAGCATTATGAATAGGTTTCTCTCGCTGCTTCCCTCAATGGATCCAGACCTAGT
AATAGGCCCGATGCAGGGCGAAGACGCTGCCGTCATCAGATTTAAAGATGGTTTTCTCGTGACACACGTAGACCCCATAA
CCACTGGAGTGAAAAAAGCCGGTTATCTAGCCGTGCACGTAGCAAGCAACGATATAGCTGTTAGAGGAGTGACCCCGAAA
TGGTTTATGCCAGTAGTATTAATCCCAAGGCATTATAGTGTGGAGGAGGCGGAGGAATTGTTCAGTGATATGGGGAAAGC
ACTAAGCGAGATACATGGTGTAGCTATAGGGGGTCATACAGAGGTCACGCCGGGATTAGATAGACCGATAATAGCGATGA
CTGTGATAGGGTACACTAATGGAAGGGTAATTTCCACGAGAGACGCTGGGGAAGGAGACTACGTGGTTGTAATCGGGAGG
ATAGGGGGTGAGGGTGCAGGAGTTATTGCATGGGACTTCGGGGATAAATTACTGGGAAAAGTTCCGAGAGATGTTATCGA
ACATGCACGCAGCTTCATCTACGATGTAAGTATTGTTAAGACAGCTTTAGCTATAAAAGATTACGTGAACACTATGCATG
ATGCTACAGAGGGAGGTATATTACAAGCCCTTAGGGAAGTAGCATCCGCCAGCAAGAAAGACATCGTAGTCTTAGACAAG
GCATTCTACATCGATGAGGAGGTTAAAAGAATAACGAGCGCTGTCAACGTAGACCCGCTTAGATTACTGAGTAGTGGATG
CATCGTTGCAACAGTTGCCCCTGGCTACTTAGACAGCTTGTTAAATGAGTTAAAGAAGCATGGTATCAGGCACAGTGTGG
TGGGACGGGTTACCAGAGGGGAAGGAAGGGTCATAATTAAGGGAGATAGCGGGGAAACCATTACTATTATAGACTCCGAT
ATTACTGATGAAATTTATAAGCTGTGGAATAAATGA

Upstream 100 bases:

>100_bases
TCTCTCCTGTAGAATACATCTGCAAAGACTGCGCTGCAAAGTATCATTTAAAGCTTAAAATAGATAATTGAATACCATGT
GGAGAAACTGAGGGGTGCTT

Downstream 100 bases:

>100_bases
GTCTGAGACTTGGTGGATGCAATGAGTACTACACCGCCAACTATTGAAGGAGTAGTTAGAACACTTACAATACTCTCACA
AAACATTAAGTCCCAAGTTA

Product: AIR synthase-like protein domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MDKTGKFSWSIMNRFLSLLPSMDPDLVIGPMQGEDAAVIRFKDGFLVTHVDPITTGVKKAGYLAVHVASNDIAVRGVTPK
WFMPVVLIPRHYSVEEAEELFSDMGKALSEIHGVAIGGHTEVTPGLDRPIIAMTVIGYTNGRVISTRDAGEGDYVVVIGR
IGGEGAGVIAWDFGDKLLGKVPRDVIEHARSFIYDVSIVKTALAIKDYVNTMHDATEGGILQALREVASASKKDIVVLDK
AFYIDEEVKRITSAVNVDPLRLLSSGCIVATVAPGYLDSLLNELKKHGIRHSVVGRVTRGEGRVIIKGDSGETITIIDSD
ITDEIYKLWNK

Sequences:

>Translated_331_residues
MDKTGKFSWSIMNRFLSLLPSMDPDLVIGPMQGEDAAVIRFKDGFLVTHVDPITTGVKKAGYLAVHVASNDIAVRGVTPK
WFMPVVLIPRHYSVEEAEELFSDMGKALSEIHGVAIGGHTEVTPGLDRPIIAMTVIGYTNGRVISTRDAGEGDYVVVIGR
IGGEGAGVIAWDFGDKLLGKVPRDVIEHARSFIYDVSIVKTALAIKDYVNTMHDATEGGILQALREVASASKKDIVVLDK
AFYIDEEVKRITSAVNVDPLRLLSSGCIVATVAPGYLDSLLNELKKHGIRHSVVGRVTRGEGRVIIKGDSGETITIIDSD
ITDEIYKLWNK
>Mature_331_residues
MDKTGKFSWSIMNRFLSLLPSMDPDLVIGPMQGEDAAVIRFKDGFLVTHVDPITTGVKKAGYLAVHVASNDIAVRGVTPK
WFMPVVLIPRHYSVEEAEELFSDMGKALSEIHGVAIGGHTEVTPGLDRPIIAMTVIGYTNGRVISTRDAGEGDYVVVIGR
IGGEGAGVIAWDFGDKLLGKVPRDVIEHARSFIYDVSIVKTALAIKDYVNTMHDATEGGILQALREVASASKKDIVVLDK
AFYIDEEVKRITSAVNVDPLRLLSSGCIVATVAPGYLDSLLNELKKHGIRHSVVGRVTRGEGRVIIKGDSGETITIIDSD
ITDEIYKLWNK

Specific function: Unknown

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 35955; Mature: 35955

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTGKFSWSIMNRFLSLLPSMDPDLVIGPMQGEDAAVIRFKDGFLVTHVDPITTGVKKA
CCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCEEEEECCHHHHHHHCC
GYLAVHVASNDIAVRGVTPKWFMPVVLIPRHYSVEEAEELFSDMGKALSEIHGVAIGGHT
CEEEEEEECCCEEEEECCCHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCC
EVTPGLDRPIIAMTVIGYTNGRVISTRDAGEGDYVVVIGRIGGEGAGVIAWDFGDKLLGK
CCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHH
VPRDVIEHARSFIYDVSIVKTALAIKDYVNTMHDATEGGILQALREVASASKKDIVVLDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEH
AFYIDEEVKRITSAVNVDPLRLLSSGCIVATVAPGYLDSLLNELKKHGIRHSVVGRVTRG
HHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHEEECC
EGRVIIKGDSGETITIIDSDITDEIYKLWNK
CCEEEEECCCCCEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MDKTGKFSWSIMNRFLSLLPSMDPDLVIGPMQGEDAAVIRFKDGFLVTHVDPITTGVKKA
CCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCEEEEECCHHHHHHHCC
GYLAVHVASNDIAVRGVTPKWFMPVVLIPRHYSVEEAEELFSDMGKALSEIHGVAIGGHT
CEEEEEEECCCEEEEECCCHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCC
EVTPGLDRPIIAMTVIGYTNGRVISTRDAGEGDYVVVIGRIGGEGAGVIAWDFGDKLLGK
CCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCHHHHH
VPRDVIEHARSFIYDVSIVKTALAIKDYVNTMHDATEGGILQALREVASASKKDIVVLDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEH
AFYIDEEVKRITSAVNVDPLRLLSSGCIVATVAPGYLDSLLNELKKHGIRHSVVGRVTRG
HHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHEEECC
EGRVIIKGDSGETITIIDSDITDEIYKLWNK
CCEEEEECCCCCEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]