Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884773

Identifier: 218884773

GI number: 218884773

Start: 1354230

End: 1354772

Strand: Reverse

Name: 218884773

Synonym: DKAM_1462

Alternate gene names: NA

Gene position: 1354772-1354230 (Counterclockwise)

Preceding gene: 218884774

Following gene: 218884771

Centisome position: 99.23

GC content: 38.49

Gene sequence:

>543_bases
GTGGATGCAATGAGTACTACACCGCCAACTATTGAAGGAGTAGTTAGAACACTTACAATACTCTCACAAAACATTAAGTC
CCAAGTTATTGAAAGACATGAGTTAGACTCGAAATCCATCACCCTAATCTCGAGTCTAAGGAAGATAGTTGACGATGTCG
CTGTGTGGCTTGATCAAGTGGATAAAAGACTGAAAGCCGAGGATGTAAAGAGGGGGGTTACCAGGCTGGCATCATATACC
TATCTTATAATAGGTAAAAGCGAAATAGTGGTTATGCGGAGTAAGCCAGAATATATTATTGTATCGGTAAACCTGGAGAA
AAACTCGATAAGCATAAAGACAAGAAACACGATTCTATTAATAGAGCCTGGTAGAATATACATGCGTGTAAAAGGGGTAA
GTGTTGAGATCGATCCATTAAAGGCAGAGGATTATATATCAAAGAGAGATGAACTAGTAAATGCCCTAAGAGTACTCGGA
AAAAACATAGACCTTAAAGTATCACAGTTAATTGAACAGTATGTAAGTAAAAAAGCCGGCTAG

Upstream 100 bases:

>100_bases
GGTCATAATTAAGGGAGATAGCGGGGAAACCATTACTATTATAGACTCCGATATTACTGATGAAATTTATAAGCTGTGGA
ATAAATGAGTCTGAGACTTG

Downstream 100 bases:

>100_bases
CTGCTCTTTACGCTTTCTCCCTCTGGAACGATAGTCTTCGGTAGCTCCGCGAACTTCTCCTTCATCTTCTGCTCTGCTAC
GATCTTCGCCTCCTCTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDAMSTTPPTIEGVVRTLTILSQNIKSQVIERHELDSKSITLISSLRKIVDDVAVWLDQVDKRLKAEDVKRGVTRLASYT
YLIIGKSEIVVMRSKPEYIIVSVNLEKNSISIKTRNTILLIEPGRIYMRVKGVSVEIDPLKAEDYISKRDELVNALRVLG
KNIDLKVSQLIEQYVSKKAG

Sequences:

>Translated_180_residues
MDAMSTTPPTIEGVVRTLTILSQNIKSQVIERHELDSKSITLISSLRKIVDDVAVWLDQVDKRLKAEDVKRGVTRLASYT
YLIIGKSEIVVMRSKPEYIIVSVNLEKNSISIKTRNTILLIEPGRIYMRVKGVSVEIDPLKAEDYISKRDELVNALRVLG
KNIDLKVSQLIEQYVSKKAG
>Mature_180_residues
MDAMSTTPPTIEGVVRTLTILSQNIKSQVIERHELDSKSITLISSLRKIVDDVAVWLDQVDKRLKAEDVKRGVTRLASYT
YLIIGKSEIVVMRSKPEYIIVSVNLEKNSISIKTRNTILLIEPGRIYMRVKGVSVEIDPLKAEDYISKRDELVNALRVLG
KNIDLKVSQLIEQYVSKKAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20309; Mature: 20309

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAMSTTPPTIEGVVRTLTILSQNIKSQVIERHELDSKSITLISSLRKIVDDVAVWLDQV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DKRLKAEDVKRGVTRLASYTYLIIGKSEIVVMRSKPEYIIVSVNLEKNSISIKTRNTILL
HHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCEEEEEEEECCCEEEEEECCEEEE
IEPGRIYMRVKGVSVEIDPLKAEDYISKRDELVNALRVLGKNIDLKVSQLIEQYVSKKAG
EECCEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAMSTTPPTIEGVVRTLTILSQNIKSQVIERHELDSKSITLISSLRKIVDDVAVWLDQV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DKRLKAEDVKRGVTRLASYTYLIIGKSEIVVMRSKPEYIIVSVNLEKNSISIKTRNTILL
HHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCEEEEEEEECCCEEEEEECCEEEE
IEPGRIYMRVKGVSVEIDPLKAEDYISKRDELVNALRVLGKNIDLKVSQLIEQYVSKKAG
EECCEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA