| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is yaaI [H]
Identifier: 218884761
GI number: 218884761
Start: 1343840
End: 1344394
Strand: Reverse
Name: yaaI [H]
Synonym: DKAM_1450
Alternate gene names: 218884761
Gene position: 1344394-1343840 (Counterclockwise)
Preceding gene: 218884763
Following gene: 218884760
Centisome position: 98.47
GC content: 43.96
Gene sequence:
>555_bases GTGTCGCTCTTGAGGCCGGCTCTACTAGTAGTGGACATGTTGAAAGAGTTTGTACATGGTAGACTAAGAAGCCCGGAGGC ATCGAGAATAATCCCTGTGATAAAGGATCTAACGAGCATCATGCATAAAAGAGGATTCCCAGTTATATACCTAGCCGATC ACCACTACCCATTCGATCATGAGTTATCCATATGGGGACCGCATGCAATGCATAATGATCCAGAGTCGGAGATAATAGAG GAGCTGAGGCCTGGACCAAGCGATATAGTATTATATAAGAGATCCTATAGCGGCTTCAGGGAAACAGGCCTAGACTACAT ACTCAGAGACCTAGGCATAGACACCGTGATTATAACAGGTATACATACTCATATATGCGTACTCCACACGGCAATGGATG CATTCTATAACAGGTACCAGGTTATAGTGGTCGAGGATGCAGTGAGCGCTTTTAGTAGAAGCGACCACGAATGGGCATTA AACTATATGAAGACCATACTTGGATGCAGAATAATGAAGTCCAGGGAAGTAATAGAATTCATAAGCAGCAAATAG
Upstream 100 bases:
>100_bases AATATCAGCCCTCACACGGGTCTTCATCGCTTTAACTCAGAACCGAAGTCGGTCATCACACTAACTTTTAATTCCCTCAA CCACCTTATATCAATAACTG
Downstream 100 bases:
>100_bases TGGTTAACAGTGATCAACTGCGGCTTACTGGAAACAATTAAGAATATTTCAAGGGAATCGGGATTCACTGTAGCAGAGCT ATTAGTAGTCATGCTGGGAA
Product: isochorismatase hydrolase
Products: 2,3-Dihydro-2,3-dihydroxybenzoate; Pyruvate [C]
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSLLRPALLVVDMLKEFVHGRLRSPEASRIIPVIKDLTSIMHKRGFPVIYLADHHYPFDHELSIWGPHAMHNDPESEIIE ELRPGPSDIVLYKRSYSGFRETGLDYILRDLGIDTVIITGIHTHICVLHTAMDAFYNRYQVIVVEDAVSAFSRSDHEWAL NYMKTILGCRIMKSREVIEFISSK
Sequences:
>Translated_184_residues MSLLRPALLVVDMLKEFVHGRLRSPEASRIIPVIKDLTSIMHKRGFPVIYLADHHYPFDHELSIWGPHAMHNDPESEIIE ELRPGPSDIVLYKRSYSGFRETGLDYILRDLGIDTVIITGIHTHICVLHTAMDAFYNRYQVIVVEDAVSAFSRSDHEWAL NYMKTILGCRIMKSREVIEFISSK >Mature_183_residues SLLRPALLVVDMLKEFVHGRLRSPEASRIIPVIKDLTSIMHKRGFPVIYLADHHYPFDHELSIWGPHAMHNDPESEIIEE LRPGPSDIVLYKRSYSGFRETGLDYILRDLGIDTVIITGIHTHICVLHTAMDAFYNRYQVIVVEDAVSAFSRSDHEWALN YMKTILGCRIMKSREVIEFISSK
Specific function: Required For Production Of 2,3-Dhb. Also Serves As An Aryl Carrier Protein And Plays A Role In Enterobactin Assembly. [C]
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family [H]
Homologues:
Organism=Escherichia coli, GI1786811, Length=180, Percent_Identity=31.1111111111111, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI87081820, Length=93, Percent_Identity=43.010752688172, Blast_Score=71, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: 3.3.2.1 [C]
Molecular weight: Translated: 21205; Mature: 21074
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLRPALLVVDMLKEFVHGRLRSPEASRIIPVIKDLTSIMHKRGFPVIYLADHHYPFDH CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC ELSIWGPHAMHNDPESEIIEELRPGPSDIVLYKRSYSGFRETGLDYILRDLGIDTVIITG CEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHH IHTHICVLHTAMDAFYNRYQVIVVEDAVSAFSRSDHEWALNYMKTILGCRIMKSREVIEF HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ISSK HHCC >Mature Secondary Structure SLLRPALLVVDMLKEFVHGRLRSPEASRIIPVIKDLTSIMHKRGFPVIYLADHHYPFDH CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC ELSIWGPHAMHNDPESEIIEELRPGPSDIVLYKRSYSGFRETGLDYILRDLGIDTVIITG CEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHH IHTHICVLHTAMDAFYNRYQVIVVEDAVSAFSRSDHEWALNYMKTILGCRIMKSREVIEF HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ISSK HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; Isochorismate [C]
Specific reaction: H2O + Isochorismate --> 2,3-Dihydro-2,3-dihydroxybenzoate + Pyruvate [C]
General reaction: Ether hydrolysis [C]
Inhibitor: Fe2+ [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]