Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884763

Identifier: 218884763

GI number: 218884763

Start: 1345894

End: 1346151

Strand: Reverse

Name: 218884763

Synonym: DKAM_1452

Alternate gene names: NA

Gene position: 1346151-1345894 (Counterclockwise)

Preceding gene: 218884765

Following gene: 218884761

Centisome position: 98.6

GC content: 41.47

Gene sequence:

>258_bases
ATGGGACGTAAGAGAGGAGAGTTAGAGAACTGGCTTAGGAGAATAGTTTTCGGCGGATTTAAAAACAATTATGTAATCTA
CATAAGATACCGGGCAGAGAGTGGTGAAATCCTGAAGCCTGTGCCCGGCGAGTTAATAATCGATCTACGGGCAGGATATA
TATACACACATAACGAGATCATACCATTGCACAGGGTTGAAGAGATCAGGGATAAAAATAACAGAGTTTTATACAAGAGG
GGAAAAAACGAGGGTTAG

Upstream 100 bases:

>100_bases
ACCACTATCTCTTAAATCGAGGCCCACTTAACCAGGTTAAGCTATAAGTAGTCTCAAACGGATCACTTAGATCGGGTGCT
TGAAGGTGGCTTAAGTAGAT

Downstream 100 bases:

>100_bases
ATCCATCCCCTTAGCTTCATAGCCTTTACGACACGGTCTACAGCTATAGCGTAGGCAGCAGTCCTCATTGGATATTCTGA
GAACCTCTTTCTCCACTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MGRKRGELENWLRRIVFGGFKNNYVIYIRYRAESGEILKPVPGELIIDLRAGYIYTHNEIIPLHRVEEIRDKNNRVLYKR
GKNEG

Sequences:

>Translated_85_residues
MGRKRGELENWLRRIVFGGFKNNYVIYIRYRAESGEILKPVPGELIIDLRAGYIYTHNEIIPLHRVEEIRDKNNRVLYKR
GKNEG
>Mature_84_residues
GRKRGELENWLRRIVFGGFKNNYVIYIRYRAESGEILKPVPGELIIDLRAGYIYTHNEIIPLHRVEEIRDKNNRVLYKRG
KNEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10116; Mature: 9985

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKRGELENWLRRIVFGGFKNNYVIYIRYRAESGEILKPVPGELIIDLRAGYIYTHNEI
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCEEEEEEECCEEEECCCE
IPLHRVEEIRDKNNRVLYKRGKNEG
ECHHHHHHHHCCCCEEEEECCCCCC
>Mature Secondary Structure 
GRKRGELENWLRRIVFGGFKNNYVIYIRYRAESGEILKPVPGELIIDLRAGYIYTHNEI
CCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCEEEEEEECCEEEECCCE
IPLHRVEEIRDKNNRVLYKRGKNEG
ECHHHHHHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA