| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884760
Identifier: 218884760
GI number: 218884760
Start: 1343249
End: 1343830
Strand: Reverse
Name: 218884760
Synonym: DKAM_1449
Alternate gene names: NA
Gene position: 1343830-1343249 (Counterclockwise)
Preceding gene: 218884761
Following gene: 218884759
Centisome position: 98.43
GC content: 39.0
Gene sequence:
>582_bases GTGATCAACTGCGGCTTACTGGAAACAATTAAGAATATTTCAAGGGAATCGGGATTCACTGTAGCAGAGCTATTAGTAGT CATGCTGGGAATGCATAAGGAGGGTCTTGGAAGAGCCTCTGTGTCAAGGAAAACCAGTATAGGAGAGAGAAGAATACGCC GGATAAATGAATACGTTAAATCACTTCAGAAAACACGCCCGGAACTATATGAATTCATAACAGAGGGTATTCATCAAGCA TCGATAATTACGCAACCAGTTAAACAATACCTCCTCACAATATTTCACCCAGTTGATCCAGACCTCCTTAAAAAAGTTGA GTCAAAAATAGTAGAGATAAGAGATTGGATCATTGTTGAAACAAGGGATAGAGAATGTATAGAGGTTATTGGTATAGTAC CAGATAGAATAGTATTCCCATTGGTCCCCGAAGAACTTAGTAGAAGATACATCGAACTTGTGCCTGCAACTCTCCTAGAA AACAACTCAGTATTAGTTTTATGGAGAAAGCACATACCATTACTATATGAGTCAGCTGTTCTCAACGCCCTTGTAAACAT ATGTACGGAATCAATGATCTGA
Upstream 100 bases:
>100_bases CCACGAATGGGCATTAAACTATATGAAGACCATACTTGGATGCAGAATAATGAAGTCCAGGGAAGTAATAGAATTCATAA GCAGCAAATAGTGGTTAACA
Downstream 100 bases:
>100_bases CTAAATCCCTTTAAGGGTTATCAACTCCGTCCAGATGCGTTCGCTACATAGTTATCCCCAGCAACATGGATCACCACATT ACATTTCATCTAATTTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MINCGLLETIKNISRESGFTVAELLVVMLGMHKEGLGRASVSRKTSIGERRIRRINEYVKSLQKTRPELYEFITEGIHQA SIITQPVKQYLLTIFHPVDPDLLKKVESKIVEIRDWIIVETRDRECIEVIGIVPDRIVFPLVPEELSRRYIELVPATLLE NNSVLVLWRKHIPLLYESAVLNALVNICTESMI
Sequences:
>Translated_193_residues MINCGLLETIKNISRESGFTVAELLVVMLGMHKEGLGRASVSRKTSIGERRIRRINEYVKSLQKTRPELYEFITEGIHQA SIITQPVKQYLLTIFHPVDPDLLKKVESKIVEIRDWIIVETRDRECIEVIGIVPDRIVFPLVPEELSRRYIELVPATLLE NNSVLVLWRKHIPLLYESAVLNALVNICTESMI >Mature_193_residues MINCGLLETIKNISRESGFTVAELLVVMLGMHKEGLGRASVSRKTSIGERRIRRINEYVKSLQKTRPELYEFITEGIHQA SIITQPVKQYLLTIFHPVDPDLLKKVESKIVEIRDWIIVETRDRECIEVIGIVPDRIVFPLVPEELSRRYIELVPATLLE NNSVLVLWRKHIPLLYESAVLNALVNICTESMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22174; Mature: 22174
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINCGLLETIKNISRESGFTVAELLVVMLGMHKEGLGRASVSRKTSIGERRIRRINEYVK CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLQKTRPELYEFITEGIHQASIITQPVKQYLLTIFHPVDPDLLKKVESKIVEIRDWIIVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEE TRDRECIEVIGIVPDRIVFPLVPEELSRRYIELVPATLLENNSVLVLWRKHIPLLYESAV CCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH LNALVNICTESMI HHHHHHHHHHCCC >Mature Secondary Structure MINCGLLETIKNISRESGFTVAELLVVMLGMHKEGLGRASVSRKTSIGERRIRRINEYVK CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLQKTRPELYEFITEGIHQASIITQPVKQYLLTIFHPVDPDLLKKVESKIVEIRDWIIVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEE TRDRECIEVIGIVPDRIVFPLVPEELSRRYIELVPATLLENNSVLVLWRKHIPLLYESAV CCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH LNALVNICTESMI HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA