BacMap

Definition	Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession	NC_011766
Length	1,365,223

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The map label for this gene is yclP [H]

Identifier: 218884757

GI number: 218884757

Start: 1340378

End: 1341130

Strand: Reverse

Name: yclP [H]

Synonym: DKAM_1446

Alternate gene names: 218884757

Gene position: 1341130-1340378 (Counterclockwise)

Preceding gene: 218884758

Following gene: 218884755

Centisome position: 98.24

GC content: 42.23

Gene sequence:

>753_bases
ATGGTGATTAAGGCCAGTAATGTAGTAGTCGAATATACAGGTGGATTAAAGGGATTAAACAATGCATCTCTCGAAATAAT
GGAGAATAAAGTCACATGCTTAATGGGTCCTAATGCATCAGGTAAAACTACCCTCTTACGTGCACTAGCCAGGCTAGTAG
GCTACAAGGGCTCGATACTAATTGATGGAAGAGAGGTCTCAAAGACGCCGCTGACAGTTTTATCAAGGATCCTATCGTAT
GGGTCACAACAAACCATATCTACGTCCCTACAGTTACAGGTTAGGGAGGTACTTGAAATGGCGCTTTACCCGCTTAAAAA
CATAGATGTCGAGGAGGCAATATATAATACATCAATAGAGCTAGGCATCACGGGTTTACTAGATAGATATATTAATGAAT
TAAGCAGCGGCGAGCTACAGAAAATAGTGATAGCCTCAGCACTGATAAAGAAACCACGGTACATATTACTTGATGAACCA
GACGCCCATATCGACACAGGATTCAAACCAGTCCTCTCCAAAACACTTAGAAAGAAGTCCGGATCCTCGACAATAATTAT
CGCTACACACGACCCGATATTCGCATCGTACACCTGCGACTATATAGTAGTCCTAAGAAGCGGCTCCATAGCGTTCCATG
GATGGCTGAATGAATTAATGGAGAACCTGGATGTCCTAAGAGAAGTATACGGTGTAGAGTTCATGGTCACTGAAATACCT
GGAGGCATGAGAATCATTATACCATACTACTAA

Upstream 100 bases:

>100_bases
CTCTTCGCTGTAATATGGAGTGAAATACCGGCTGGAGCCATCGCCTCACTTATTGGGGCTCCGTTCTTCATATATTTACT
GCTCTCGAGGCGGAGGATAT

Downstream 100 bases:

>100_bases
ACTGACGTCACCAAGGATTATGCCTGTCACGGGTTCTGAATTCTTGTTAAATATTTTTGGATGTGTTTTATCTTCTTGGT
GTCTTCACTTGTTTTCCTCG

Product: Iron compound ABC transporter, ATP-binding protein

Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MVIKASNVVVEYTGGLKGLNNASLEIMENKVTCLMGPNASGKTTLLRALARLVGYKGSILIDGREVSKTPLTVLSRILSY
GSQQTISTSLQLQVREVLEMALYPLKNIDVEEAIYNTSIELGITGLLDRYINELSSGELQKIVIASALIKKPRYILLDEP
DAHIDTGFKPVLSKTLRKKSGSSTIIIATHDPIFASYTCDYIVVLRSGSIAFHGWLNELMENLDVLREVYGVEFMVTEIP
GGMRIIIPYY

Sequences:

>Translated_250_residues
MVIKASNVVVEYTGGLKGLNNASLEIMENKVTCLMGPNASGKTTLLRALARLVGYKGSILIDGREVSKTPLTVLSRILSY
GSQQTISTSLQLQVREVLEMALYPLKNIDVEEAIYNTSIELGITGLLDRYINELSSGELQKIVIASALIKKPRYILLDEP
DAHIDTGFKPVLSKTLRKKSGSSTIIIATHDPIFASYTCDYIVVLRSGSIAFHGWLNELMENLDVLREVYGVEFMVTEIP
GGMRIIIPYY
>Mature_250_residues
MVIKASNVVVEYTGGLKGLNNASLEIMENKVTCLMGPNASGKTTLLRALARLVGYKGSILIDGREVSKTPLTVLSRILSY
GSQQTISTSLQLQVREVLEMALYPLKNIDVEEAIYNTSIELGITGLLDRYINELSSGELQKIVIASALIKKPRYILLDEP
DAHIDTGFKPVLSKTLRKKSGSSTIIIATHDPIFASYTCDYIVVLRSGSIAFHGWLNELMENLDVLREVYGVEFMVTEIP
GGMRIIIPYY

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4604

COG function: function code P; ABC-type enterochelin transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9955963, Length=220, Percent_Identity=27.7272727272727, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI148612844, Length=220, Percent_Identity=29.0909090909091, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI255708477, Length=220, Percent_Identity=29.0909090909091, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI42741659, Length=217, Percent_Identity=27.1889400921659, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI90421313, Length=239, Percent_Identity=25.1046025104602, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI9961252, Length=223, Percent_Identity=27.8026905829596, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI4505771, Length=223, Percent_Identity=27.8026905829596, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI153792144, Length=220, Percent_Identity=27.7272727272727, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI9955968, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI9955966, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI45243524, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI27881501, Length=212, Percent_Identity=26.4150943396226, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI30795238, Length=212, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI9961250, Length=218, Percent_Identity=27.9816513761468, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI11967969, Length=223, Percent_Identity=26.457399103139, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=32.0675105485232, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1786803, Length=241, Percent_Identity=27.8008298755187, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1790739, Length=252, Percent_Identity=28.968253968254, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87081709, Length=198, Percent_Identity=29.7979797979798, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788761, Length=222, Percent_Identity=30.1801801801802, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788450, Length=216, Percent_Identity=27.3148148148148, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787029, Length=222, Percent_Identity=28.8288288288288, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788506, Length=208, Percent_Identity=29.3269230769231, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789032, Length=222, Percent_Identity=27.027027027027, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786398, Length=245, Percent_Identity=28.9795918367347, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790467, Length=198, Percent_Identity=29.2929292929293, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786563, Length=217, Percent_Identity=27.6497695852535, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787182, Length=249, Percent_Identity=28.5140562248996, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787370, Length=210, Percent_Identity=30.4761904761905, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1787712, Length=238, Percent_Identity=26.890756302521, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789864, Length=244, Percent_Identity=25.8196721311475, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786253, Length=208, Percent_Identity=25.9615384615385, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788225, Length=250, Percent_Identity=28, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787772, Length=200, Percent_Identity=30, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789891, Length=219, Percent_Identity=26.9406392694064, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787143, Length=249, Percent_Identity=26.5060240963855, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787759, Length=228, Percent_Identity=24.5614035087719, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787500, Length=220, Percent_Identity=26.8181818181818, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788002, Length=233, Percent_Identity=26.1802575107296, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787089, Length=213, Percent_Identity=26.7605633802817, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788472, Length=208, Percent_Identity=28.3653846153846, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789672, Length=214, Percent_Identity=23.3644859813084, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87082267, Length=211, Percent_Identity=22.7488151658768, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1790190, Length=212, Percent_Identity=25, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=230, Percent_Identity=31.304347826087, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI115534520, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=211, Percent_Identity=27.4881516587678, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=211, Percent_Identity=27.4881516587678, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=219, Percent_Identity=26.4840182648402, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=228, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=217, Percent_Identity=30.4147465437788, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=220, Percent_Identity=26.3636363636364, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17555800, Length=205, Percent_Identity=28.780487804878, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=216, Percent_Identity=27.3148148148148, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=197, Percent_Identity=27.4111675126904, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=222, Percent_Identity=27.9279279279279, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=217, Percent_Identity=27.6497695852535, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320296, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322640, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357907, Length=234, Percent_Identity=30.3418803418803, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI281363262, Length=254, Percent_Identity=28.3464566929134, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24653245, Length=254, Percent_Identity=28.3464566929134, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85726357, Length=216, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574533, Length=223, Percent_Identity=29.5964125560538, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24661270, Length=218, Percent_Identity=26.605504587156, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355589, Length=218, Percent_Identity=26.605504587156, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24659289, Length=214, Percent_Identity=26.6355140186916, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27588; Mature: 27588

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIKASNVVVEYTGGLKGLNNASLEIMENKVTCLMGPNASGKTTLLRALARLVGYKGSIL
CEEEECCEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCEE
IDGREVSKTPLTVLSRILSYGSQQTISTSLQLQVREVLEMALYPLKNIDVEEAIYNTSIE
ECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCE
LGITGLLDRYINELSSGELQKIVIASALIKKPRYILLDEPDAHIDTGFKPVLSKTLRKKS
ECHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC
GSSTIIIATHDPIFASYTCDYIVVLRSGSIAFHGWLNELMENLDVLREVYGVEFMVTEIP
CCCEEEEEECCCEEEECCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCEEEEEECC
GGMRIIIPYY
CCEEEEEECC
>Mature Secondary Structure
MVIKASNVVVEYTGGLKGLNNASLEIMENKVTCLMGPNASGKTTLLRALARLVGYKGSIL
CEEEECCEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCEE
IDGREVSKTPLTVLSRILSYGSQQTISTSLQLQVREVLEMALYPLKNIDVEEAIYNTSIE
ECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCE
LGITGLLDRYINELSSGELQKIVIASALIKKPRYILLDEPDAHIDTGFKPVLSKTLRKKS
ECHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC
GSSTIIIATHDPIFASYTCDYIVVLRSGSIAFHGWLNELMENLDVLREVYGVEFMVTEIP
CCCEEEEEECCCEEEECCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCEEEEEECC
GGMRIIIPYY
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]

Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]