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The map label for this gene is 218884746

Identifier: 218884746

GI number: 218884746

Start: 1328688

End: 1329845

Strand: Reverse

Name: 218884746

Synonym: DKAM_1435

Alternate gene names: NA

Gene position: 1329845-1328688 (Counterclockwise)

Preceding gene: 218884747

Following gene: 218884745

Centisome position: 97.41

GC content: 45.68

Gene sequence:

>1158_bases
ATGCTTACTAAAAAAGTTGTCACGACAACCCTGGTCGCGATTATAGTTATTGTGGCGGTGGTTACCAGTCTCTATTACTC
TTTCTTCTACGATAAAAACCTGCATACAGGGAAGGTTGAGGAGACCCCGTCATATATCATCGTCACAGATGTCACCAATA
GAACAATCAAAATCCCAGCAAATCTAAGCAGAGTGGTCGCTATAGGCCCAGGAGCTCTGAGGCTAGTAGTATACCTGAAT
GCTACCGATCTCCTTGTTGGCGTAGAAGAAGTTGAGGTAACCCGAGATCCCACTGGGAAAGATTACGCAATGGCCCAGTA
CAACACCCTCAAGAACCTGCCTGTAGTAGGACCCGGGGGTCCAAATAATCCTCCAGACCCAGAGAAACTCAGGGCTGTAA
AACCACAGTTGATAATAATGTCGGGGATATATGCACAACTCTACCCACCTGATAGACTAGCCGAAGAGGTTAATGCCAGC
GTCCTAGTGATCGATTACGGGAGCGCAGGCTATTTAGATGTAGAAGCTCTTAAAAACGCATTACTGATTCTTGGAAAAGC
CCTTGGGAGAGAGGAAAGAGCCGAGAACCTGGCAAACTACATTGATCAAATAGTGAGCGACTTAAACAACAGGACTAGAG
GTATTGATCCAAGGCCAAAGGTGTATGTAGGTGCTATATCGTACAAGGGCGGACAACCATTTACATCGACACAGGCCAGA
TTCGCCCCTCTACAACTTCTAAACACACCCTCCATTGTCGACTCAGTCGCCAGTAAAGCCGGCTACATGTCAATAAACTT
CGAGTATCTAGTGCAGCAACAACCGGACTTCGTGTTCATAGACGAGAATAACTTGAACAACGTACTAAGCGATTACAGGA
AGGATCCGTCTCAATACTGTAGCCTAAACGCGTTCAGGACGGGAAGGGTTTATGGTGTCTTACCATTTAACTTCTATCAC
ACAAATATCGCGACAGCATTCGCAAACGCGTACTTCATTGGGAAAGTGCTCTACCCGGATAGATTCGCTGACATAGACCC
AGTTGTAAAGGCCGATGAAATTTTCACAATGTTTGTTGGTAAACCAATATACCAGGGGTTTATCGATGGTGGATACAAAG
GATTCATGAACCTCAGCGAATTATTCCCATGTGGCTGA

Upstream 100 bases:

>100_bases
GATGGAAAACCCCTGTGCATCCAGTGTGCAAATGGAGAGACCTTAGCTATAATAGGAAGGGGCATATCACACATGAGGAT
CCCCTACAGGGTGGTCTCCA

Downstream 100 bases:

>100_bases
ATACATATGACCGTGGAAAAGCTTTTTAAAGCGAGAAAAATCTTCATGCTGGCATCAGCAACTATATTAATATTCATATT
ACCCTTTTCTCTTTCCGTGG

Product: Fe3+-hydroxamate ABC transporter periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLTKKVVTTTLVAIIVIVAVVTSLYYSFFYDKNLHTGKVEETPSYIIVTDVTNRTIKIPANLSRVVAIGPGALRLVVYLN
ATDLLVGVEEVEVTRDPTGKDYAMAQYNTLKNLPVVGPGGPNNPPDPEKLRAVKPQLIIMSGIYAQLYPPDRLAEEVNAS
VLVIDYGSAGYLDVEALKNALLILGKALGREERAENLANYIDQIVSDLNNRTRGIDPRPKVYVGAISYKGGQPFTSTQAR
FAPLQLLNTPSIVDSVASKAGYMSINFEYLVQQQPDFVFIDENNLNNVLSDYRKDPSQYCSLNAFRTGRVYGVLPFNFYH
TNIATAFANAYFIGKVLYPDRFADIDPVVKADEIFTMFVGKPIYQGFIDGGYKGFMNLSELFPCG

Sequences:

>Translated_385_residues
MLTKKVVTTTLVAIIVIVAVVTSLYYSFFYDKNLHTGKVEETPSYIIVTDVTNRTIKIPANLSRVVAIGPGALRLVVYLN
ATDLLVGVEEVEVTRDPTGKDYAMAQYNTLKNLPVVGPGGPNNPPDPEKLRAVKPQLIIMSGIYAQLYPPDRLAEEVNAS
VLVIDYGSAGYLDVEALKNALLILGKALGREERAENLANYIDQIVSDLNNRTRGIDPRPKVYVGAISYKGGQPFTSTQAR
FAPLQLLNTPSIVDSVASKAGYMSINFEYLVQQQPDFVFIDENNLNNVLSDYRKDPSQYCSLNAFRTGRVYGVLPFNFYH
TNIATAFANAYFIGKVLYPDRFADIDPVVKADEIFTMFVGKPIYQGFIDGGYKGFMNLSELFPCG
>Mature_385_residues
MLTKKVVTTTLVAIIVIVAVVTSLYYSFFYDKNLHTGKVEETPSYIIVTDVTNRTIKIPANLSRVVAIGPGALRLVVYLN
ATDLLVGVEEVEVTRDPTGKDYAMAQYNTLKNLPVVGPGGPNNPPDPEKLRAVKPQLIIMSGIYAQLYPPDRLAEEVNAS
VLVIDYGSAGYLDVEALKNALLILGKALGREERAENLANYIDQIVSDLNNRTRGIDPRPKVYVGAISYKGGQPFTSTQAR
FAPLQLLNTPSIVDSVASKAGYMSINFEYLVQQQPDFVFIDENNLNNVLSDYRKDPSQYCSLNAFRTGRVYGVLPFNFYH
TNIATAFANAYFIGKVLYPDRFADIDPVVKADEIFTMFVGKPIYQGFIDGGYKGFMNLSELFPCG

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 42548; Mature: 42548

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKKVVTTTLVAIIVIVAVVTSLYYSFFYDKNLHTGKVEETPSYIIVTDVTNRTIKIPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEECCC
NLSRVVAIGPGALRLVVYLNATDLLVGVEEVEVTRDPTGKDYAMAQYNTLKNLPVVGPGG
CCEEEEEECCCEEEEEEEEECHHEEEEHHHEEEECCCCCCCEEEEHHHHHCCCCEECCCC
PNNPPDPEKLRAVKPQLIIMSGIYAQLYPPDRLAEEVNASVLVIDYGSAGYLDVEALKNA
CCCCCCHHHHHHCCCEEEEEECCEEECCCHHHHHHHCCCEEEEEECCCCCCEEHHHHHHH
LLILGKALGREERAENLANYIDQIVSDLNNRTRGIDPRPKVYVGAISYKGGQPFTSTQAR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCH
FAPLQLLNTPSIVDSVASKAGYMSINFEYLVQQQPDFVFIDENNLNNVLSDYRKDPSQYC
HCHHHCCCCCHHHHHHHHHCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCHHHHH
SLNAFRTGRVYGVLPFNFYHTNIATAFANAYFIGKVLYPDRFADIDPVVKADEIFTMFVG
CCCEEECCCEEEEEEEEEEHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHC
KPIYQGFIDGGYKGFMNLSELFPCG
CHHHHHHHCCCHHHHCCHHHHCCCC
>Mature Secondary Structure
MLTKKVVTTTLVAIIVIVAVVTSLYYSFFYDKNLHTGKVEETPSYIIVTDVTNRTIKIPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEECCC
NLSRVVAIGPGALRLVVYLNATDLLVGVEEVEVTRDPTGKDYAMAQYNTLKNLPVVGPGG
CCEEEEEECCCEEEEEEEEECHHEEEEHHHEEEECCCCCCCEEEEHHHHHCCCCEECCCC
PNNPPDPEKLRAVKPQLIIMSGIYAQLYPPDRLAEEVNASVLVIDYGSAGYLDVEALKNA
CCCCCCHHHHHHCCCEEEEEECCEEECCCHHHHHHHCCCEEEEEECCCCCCEEHHHHHHH
LLILGKALGREERAENLANYIDQIVSDLNNRTRGIDPRPKVYVGAISYKGGQPFTSTQAR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCH
FAPLQLLNTPSIVDSVASKAGYMSINFEYLVQQQPDFVFIDENNLNNVLSDYRKDPSQYC
HCHHHCCCCCHHHHHHHHHCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCHHHHH
SLNAFRTGRVYGVLPFNFYHTNIATAFANAYFIGKVLYPDRFADIDPVVKADEIFTMFVG
CCCEEECCCEEEEEEEEEEHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHC
KPIYQGFIDGGYKGFMNLSELFPCG
CHHHHHHHCCCHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]