| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is fecC [C]
Identifier: 218884745
GI number: 218884745
Start: 1327650
End: 1328681
Strand: Reverse
Name: fecC [C]
Synonym: DKAM_1434
Alternate gene names: 218884745
Gene position: 1328681-1327650 (Counterclockwise)
Preceding gene: 218884746
Following gene: 218884744
Centisome position: 97.32
GC content: 46.03
Gene sequence:
>1032_bases ATGACCGTGGAAAAGCTTTTTAAAGCGAGAAAAATCTTCATGCTGGCATCAGCAACTATATTAATATTCATATTACCCTT TTCTCTTTCCGTGGGATCATACAATGTTACTTACCTGGATACATTAAAGTTCATTCTTGGATACAGCAATCTACCACCAG ACGCGACAAGTATTCTACTGATTAGATTGAGAAGAGCTCTAGCCAGTATCCTAATAGGGTTCATCCTCGGAGCCTCTGGT ACCGCGATGCAGTCTGTGCTAAGAAACCCTATGGCATCTCCTTTCACGCTCGGTATATCTAGTGCTGCAGCGCTTGGGGT AGCAGTTGTCTTACTAACAGGTCTAGAAGGCTCTGTGAGAGGGGTCATTCTCGCATATTCAAACCCATACATCATACCTA TCTTCGCACTTGTCTTCGCGTTAATTCAAACAGCCATTGTTCTACTACTAGCTTACAGGGCCGGGTTGAGCGAGAGAGCC TTGGTTCTAGCAGCTATTGCAATGAATTTCTTTTACCAGGCACTGCTAAGTCTTATCCAGTACCTCAAGTTGAACGAACT TCAAGTCGCTCTAATAGTCTTCTGGAGCTTCGGTGATGTTGGTAGAATAGGGTGGGTGGAGCTGAAGATAATAGCCATTG CTGCCTCCGCGCTCTCAATATACTTCATTGCCAGAGCACTAGACTTCGATCTCATGGGTCTCGGAGACGATGTTGCCTAT GCCAGCGGTGTAAACGCTAAGAGAGTTAGATTAGAGGCCTCGATAGTGGCGGCGATAGGGGCCTCAATTGTAACCGCATT CTCTGGCGTAATAGCCTTTCTCTGCCTGATTTCACCACATATAGCGAGACTCGTTGTCGGAAACAACCACAGGTACCTGA TCCCAGAATCTATGATTGTAGCAGCAATCCTCCTCGTAGCTGCTGACAGTATTGGCAGATTTATACTCTCCCCGATAACA CTCCCCGTTGGTGTAACATTATCCCTGATCGGGTCACCGCTACTCATATACCTTCTTCTGAAGAGGCGATAA
Upstream 100 bases:
>100_bases CACAATGTTTGTTGGTAAACCAATATACCAGGGGTTTATCGATGGTGGATACAAAGGATTCATGAACCTCAGCGAATTAT TCCCATGTGGCTGAATACAT
Downstream 100 bases:
>100_bases ATATGGTTGTTATAAGAGTGGCCAACGTAGATGTAAGATACAATTGCATCAGGGCTCTGCAAGATATCTCCATCGATATA TACGAAGGGGAGGTTGTAGC
Product: Fe3+-siderophore ABC transporter permease
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTVEKLFKARKIFMLASATILIFILPFSLSVGSYNVTYLDTLKFILGYSNLPPDATSILLIRLRRALASILIGFILGASG TAMQSVLRNPMASPFTLGISSAAALGVAVVLLTGLEGSVRGVILAYSNPYIIPIFALVFALIQTAIVLLLAYRAGLSERA LVLAAIAMNFFYQALLSLIQYLKLNELQVALIVFWSFGDVGRIGWVELKIIAIAASALSIYFIARALDFDLMGLGDDVAY ASGVNAKRVRLEASIVAAIGASIVTAFSGVIAFLCLISPHIARLVVGNNHRYLIPESMIVAAILLVAADSIGRFILSPIT LPVGVTLSLIGSPLLIYLLLKRR
Sequences:
>Translated_343_residues MTVEKLFKARKIFMLASATILIFILPFSLSVGSYNVTYLDTLKFILGYSNLPPDATSILLIRLRRALASILIGFILGASG TAMQSVLRNPMASPFTLGISSAAALGVAVVLLTGLEGSVRGVILAYSNPYIIPIFALVFALIQTAIVLLLAYRAGLSERA LVLAAIAMNFFYQALLSLIQYLKLNELQVALIVFWSFGDVGRIGWVELKIIAIAASALSIYFIARALDFDLMGLGDDVAY ASGVNAKRVRLEASIVAAIGASIVTAFSGVIAFLCLISPHIARLVVGNNHRYLIPESMIVAAILLVAADSIGRFILSPIT LPVGVTLSLIGSPLLIYLLLKRR >Mature_342_residues TVEKLFKARKIFMLASATILIFILPFSLSVGSYNVTYLDTLKFILGYSNLPPDATSILLIRLRRALASILIGFILGASGT AMQSVLRNPMASPFTLGISSAAALGVAVVLLTGLEGSVRGVILAYSNPYIIPIFALVFALIQTAIVLLLAYRAGLSERAL VLAAIAMNFFYQALLSLIQYLKLNELQVALIVFWSFGDVGRIGWVELKIIAIAASALSIYFIARALDFDLMGLGDDVAYA SGVNAKRVRLEASIVAAIGASIVTAFSGVIAFLCLISPHIARLVVGNNHRYLIPESMIVAAILLVAADSIGRFILSPITL PVGVTLSLIGSPLLIYLLLKRR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790741, Length=321, Percent_Identity=31.7757009345794, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1790740, Length=288, Percent_Identity=33.6805555555556, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788004, Length=283, Percent_Identity=31.095406360424, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1786347, Length=292, Percent_Identity=31.1643835616438, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1786805, Length=293, Percent_Identity=33.1058020477816, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1786804, Length=288, Percent_Identity=32.6388888888889, Blast_Score=89, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 36747; Mature: 36616
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEKLFKARKIFMLASATILIFILPFSLSVGSYNVTYLDTLKFILGYSNLPPDATSILL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHH IRLRRALASILIGFILGASGTAMQSVLRNPMASPFTLGISSAAALGVAVVLLTGLEGSVR HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCC GVILAYSNPYIIPIFALVFALIQTAIVLLLAYRAGLSERALVLAAIAMNFFYQALLSLIQ EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH YLKLNELQVALIVFWSFGDVGRIGWVELKIIAIAASALSIYFIARALDFDLMGLGDDVAY HHCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHH ASGVNAKRVRLEASIVAAIGASIVTAFSGVIAFLCLISPHIARLVVGNNHRYLIPESMIV HCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCHHHHH AAILLVAADSIGRFILSPITLPVGVTLSLIGSPLLIYLLLKRR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVEKLFKARKIFMLASATILIFILPFSLSVGSYNVTYLDTLKFILGYSNLPPDATSILL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHH IRLRRALASILIGFILGASGTAMQSVLRNPMASPFTLGISSAAALGVAVVLLTGLEGSVR HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCC GVILAYSNPYIIPIFALVFALIQTAIVLLLAYRAGLSERALVLAAIAMNFFYQALLSLIQ EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH YLKLNELQVALIVFWSFGDVGRIGWVELKIIAIAASALSIYFIARALDFDLMGLGDDVAY HHCCCCEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHH ASGVNAKRVRLEASIVAAIGASIVTAFSGVIAFLCLISPHIARLVVGNNHRYLIPESMIV HCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCHHHHH AAILLVAADSIGRFILSPITLPVGVTLSLIGSPLLIYLLLKRR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]