| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is eif2g [H]
Identifier: 218884658
GI number: 218884658
Start: 1253129
End: 1254385
Strand: Reverse
Name: eif2g [H]
Synonym: DKAM_1347
Alternate gene names: 218884658
Gene position: 1254385-1253129 (Counterclockwise)
Preceding gene: 218884659
Following gene: 218884657
Centisome position: 91.88
GC content: 47.02
Gene sequence:
>1257_bases ATGCCGTGGGATATTAAGCCACCCGAGGTCAACATAGGCGTCGTTGGACACGTTGACCACGGTAAAACCACTCTGGTCCA AGCATTGACGGGTGTCTGGACAGCAAAGCACAGCCTAGAGATAGAACGTGGAATGACTATTAAACTAGGATATGCTGATG GGAACATCGCCTATTGTGATGGGCTACCGCTACCTGACGCATACACGATTAAAGAGTATTGTCCAGACGGCTCTGAGTCG AAGTTGCTTAGAAGGGTTAGCTACGTTGACGCGCCTGGTCATGAATTATATATGACGACCATGTTAAGTGGGGCAATGAT CATGGATGGAGCTATATTAGTTATCGCGGCCAACGAGCCATGTCCTCAGCCACAGACGGTAGAACACTTGATGGCGTTGA ACATCCTCGGTTTACGGAACATCATCATTGTTCAGAACAAAATAGATGTCGTCGATAAAAAACGCGCATTAGAGAACTAT AACGAGATCTTAAAGCTGGTTAAAGGCACTGTAGCCGAGAACGCACCAATAATACCGGTCAGCGCCCTACACCACATCAA CATAGATGCGTTGCTCCAAGCTATACAAGAGATCATTCCAACACCTGAGAGAGACTACACGAAGCCTCCATTAATGTATG TTGTGAGAAGCTTTGATGTAAACAAGCCCGGCACCCCCTATGATAAAATAGAGGGAGGAGTAATCGGGGGCTCCCTTCTA CAAGGGCGTTTCAGAGTAGGAGATGAGATAATGATACTCCCCGGGATAAAGACGCAAGTAGGGAGTGCTAAATCACAGGT CTCTAAATACGAGCCTATAGTGACGACTATAGAGGAGGTACGCTATGGCAACTTAATAGTGGATGAGGCCAGACCTGGAG GACTGGTGGCAATACAGACCAAGCTGGATCCCTCGCTAACTAAAGGTGATCAATTAGTGGGTTCAATAGTAACCACTCCT AGGAACAATATACCAGTTGTGAAGACCTTGGAGGTGCGCTTCCAGTTGTTCGAGAGAATAGTGGGCACCAAAGAACTAGG GAAACTCCCACCAATACAGGTGAATGAGAAAATAGCCGTTGCAATCGGTACAGCGAACAGGGTAGCCGTAGTGAAGTCTA TAAGGAAAGATATAATGACCATAGAGCTAACAGACCCTGTTGCAACATGGAATGGATCCAGGATAGCTATAAGCCGCCGT GTATTAGCAAGGTGGAGGCTTGCTGGCTGGGGGATAATAGAGGGTGTCTCAGAATAA
Upstream 100 bases:
>100_bases TTATTTTTAACCATGGCAGTCTCTGCACATGAGGATTGGGCGGCTTGGATTTATAAATGAATCTAAACTAAATTATTCTA GCTAAGGTGAATAAGTAATC
Downstream 100 bases:
>100_bases GGGGATAACTGTTTTACTCGATACAAACATGCTTCTCATGATGGCTAACGGCATACCTGTACTTGAACAAATAGAGGAGA AGCTTCTCACGAAGCCAAGG
Product: translation initiation factor IF-2 subunit gamma
Products: NA
Alternate protein names: aIF2-gamma; eIF-2-gamma [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MPWDIKPPEVNIGVVGHVDHGKTTLVQALTGVWTAKHSLEIERGMTIKLGYADGNIAYCDGLPLPDAYTIKEYCPDGSES KLLRRVSYVDAPGHELYMTTMLSGAMIMDGAILVIAANEPCPQPQTVEHLMALNILGLRNIIIVQNKIDVVDKKRALENY NEILKLVKGTVAENAPIIPVSALHHINIDALLQAIQEIIPTPERDYTKPPLMYVVRSFDVNKPGTPYDKIEGGVIGGSLL QGRFRVGDEIMILPGIKTQVGSAKSQVSKYEPIVTTIEEVRYGNLIVDEARPGGLVAIQTKLDPSLTKGDQLVGSIVTTP RNNIPVVKTLEVRFQLFERIVGTKELGKLPPIQVNEKIAVAIGTANRVAVVKSIRKDIMTIELTDPVATWNGSRIAISRR VLARWRLAGWGIIEGVSE
Sequences:
>Translated_418_residues MPWDIKPPEVNIGVVGHVDHGKTTLVQALTGVWTAKHSLEIERGMTIKLGYADGNIAYCDGLPLPDAYTIKEYCPDGSES KLLRRVSYVDAPGHELYMTTMLSGAMIMDGAILVIAANEPCPQPQTVEHLMALNILGLRNIIIVQNKIDVVDKKRALENY NEILKLVKGTVAENAPIIPVSALHHINIDALLQAIQEIIPTPERDYTKPPLMYVVRSFDVNKPGTPYDKIEGGVIGGSLL QGRFRVGDEIMILPGIKTQVGSAKSQVSKYEPIVTTIEEVRYGNLIVDEARPGGLVAIQTKLDPSLTKGDQLVGSIVTTP RNNIPVVKTLEVRFQLFERIVGTKELGKLPPIQVNEKIAVAIGTANRVAVVKSIRKDIMTIELTDPVATWNGSRIAISRR VLARWRLAGWGIIEGVSE >Mature_417_residues PWDIKPPEVNIGVVGHVDHGKTTLVQALTGVWTAKHSLEIERGMTIKLGYADGNIAYCDGLPLPDAYTIKEYCPDGSESK LLRRVSYVDAPGHELYMTTMLSGAMIMDGAILVIAANEPCPQPQTVEHLMALNILGLRNIIIVQNKIDVVDKKRALENYN EILKLVKGTVAENAPIIPVSALHHINIDALLQAIQEIIPTPERDYTKPPLMYVVRSFDVNKPGTPYDKIEGGVIGGSLLQ GRFRVGDEIMILPGIKTQVGSAKSQVSKYEPIVTTIEEVRYGNLIVDEARPGGLVAIQTKLDPSLTKGDQLVGSIVTTPR NNIPVVKTLEVRFQLFERIVGTKELGKLPPIQVNEKIAVAIGTANRVAVVKSIRKDIMTIELTDPVATWNGSRIAISRRV LARWRLAGWGIIEGVSE
Specific function: eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA [H]
COG id: COG5257
COG function: function code J; Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)
Gene ontology:
Cell location: Cytoplasmic, and membrane-associated [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EIF2G subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503507, Length=421, Percent_Identity=43.4679334916865, Blast_Score=337, Evalue=2e-92, Organism=Homo sapiens, GI34147630, Length=259, Percent_Identity=32.8185328185328, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI54607086, Length=300, Percent_Identity=29.3333333333333, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI1789737, Length=293, Percent_Identity=31.740614334471, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1790412, Length=293, Percent_Identity=31.740614334471, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI2367247, Length=243, Percent_Identity=31.2757201646091, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17509919, Length=421, Percent_Identity=42.0427553444181, Blast_Score=342, Evalue=2e-94, Organism=Caenorhabditis elegans, GI17556456, Length=301, Percent_Identity=30.2325581395349, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI25141371, Length=296, Percent_Identity=30.4054054054054, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17506081, Length=254, Percent_Identity=27.5590551181102, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320863, Length=422, Percent_Identity=43.3649289099526, Blast_Score=341, Evalue=2e-94, Organism=Saccharomyces cerevisiae, GI6324761, Length=264, Percent_Identity=37.1212121212121, Blast_Score=132, Evalue=9e-32, Organism=Drosophila melanogaster, GI24647046, Length=423, Percent_Identity=42.789598108747, Blast_Score=339, Evalue=2e-93, Organism=Drosophila melanogaster, GI24647048, Length=423, Percent_Identity=42.789598108747, Blast_Score=339, Evalue=3e-93, Organism=Drosophila melanogaster, GI19921738, Length=238, Percent_Identity=34.0336134453782, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI19922690, Length=262, Percent_Identity=33.969465648855, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI281363316, Length=294, Percent_Identity=30.6122448979592, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI17864358, Length=294, Percent_Identity=30.6122448979592, Blast_Score=105, Evalue=6e-23,
Paralogues:
None
Copy number: 20568 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000795 - InterPro: IPR022424 - InterPro: IPR015256 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF09173 eIF2_C; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 45775; Mature: 45644
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWDIKPPEVNIGVVGHVDHGKTTLVQALTGVWTAKHSLEIERGMTIKLGYADGNIAYCD CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCEEEEC GLPLPDAYTIKEYCPDGSESKLLRRVSYVDAPGHELYMTTMLSGAMIMDGAILVIAANEP CCCCCCCEEHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHCCCEEECCEEEEEECCCC CPQPQTVEHLMALNILGLRNIIIVQNKIDVVDKKRALENYNEILKLVKGTVAENAPIIPV CCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE SALHHINIDALLQAIQEIIPTPERDYTKPPLMYVVRSFDVNKPGTPYDKIEGGVIGGSLL HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCCCCCHHHCCCCEECHHHH QGRFRVGDEIMILPGIKTQVGSAKSQVSKYEPIVTTIEEVRYGNLIVDEARPGGLVAIQT CCCEECCCEEEEECCCCCHHCCHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCEEEEEE KLDPSLTKGDQLVGSIVTTPRNNIPVVKTLEVRFQLFERIVGTKELGKLPPIQVNEKIAV CCCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHCCCCCCEECCEEEE AIGTANRVAVVKSIRKDIMTIELTDPVATWNGSRIAISRRVLARWRLAGWGIIEGVSE EEECCCHHHHHHHHHHCEEEEEECCCEECCCCCEEEEHHHHHHHHHHCCCHHHCCCCC >Mature Secondary Structure PWDIKPPEVNIGVVGHVDHGKTTLVQALTGVWTAKHSLEIERGMTIKLGYADGNIAYCD CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCEEEEC GLPLPDAYTIKEYCPDGSESKLLRRVSYVDAPGHELYMTTMLSGAMIMDGAILVIAANEP CCCCCCCEEHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHCCCEEECCEEEEEECCCC CPQPQTVEHLMALNILGLRNIIIVQNKIDVVDKKRALENYNEILKLVKGTVAENAPIIPV CCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE SALHHINIDALLQAIQEIIPTPERDYTKPPLMYVVRSFDVNKPGTPYDKIEGGVIGGSLL HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCCCCCHHHCCCCEECHHHH QGRFRVGDEIMILPGIKTQVGSAKSQVSKYEPIVTTIEEVRYGNLIVDEARPGGLVAIQT CCCEECCCEEEEECCCCCHHCCHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCEEEEEE KLDPSLTKGDQLVGSIVTTPRNNIPVVKTLEVRFQLFERIVGTKELGKLPPIQVNEKIAV CCCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHCCCCCCEECCEEEE AIGTANRVAVVKSIRKDIMTIELTDPVATWNGSRIAISRRVLARWRLAGWGIIEGVSE EEECCCHHHHHHHHHHCEEEEEECCCEECCCCCEEEEHHHHHHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11427726 [H]