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The map label for this gene is 218884657

Identifier: 218884657

GI number: 218884657

Start: 1252720

End: 1253142

Strand: Reverse

Name: 218884657

Synonym: DKAM_1346

Alternate gene names: NA

Gene position: 1253142-1252720 (Counterclockwise)

Preceding gene: 218884658

Following gene: 218884656

Centisome position: 91.79

GC content: 44.44

Gene sequence:

>423_bases
GTGTCTCAGAATAAGGGGATAACTGTTTTACTCGATACAAACATGCTTCTCATGATGGCTAACGGCATACCTGTACTTGA
ACAAATAGAGGAGAAGCTTCTCACGAAGCCAAGGTACATAGTGATAAAGCCCGTATACGATGAACTAGTTAGAATAGTGG
ACTCAGAGAAGCCCAGTATTAGTAGGAGGGCGAGATTAGCACTTGAAATAGTTAACAGGTATTGTGAGATAGTGGATTAC
GCTGTAAACCCCGGTGAAACAGTCGATGATGCTATATTAAGATACGCCAGCGAAAACAACGTCGTGGTAGCCACAAATGA
TAAAGAGTTAAGGAGGCGCCTCAGGAGCCGTGGGCTACCAGAAATATATCTCCGTGAGGAGTCGTGGAGAATAGATGTGG
AAGGGGTTCCCTCATTCTACTGA

Upstream 100 bases:

>100_bases
GAGCTAACAGACCCTGTTGCAACATGGAATGGATCCAGGATAGCTATAAGCCGCCGTGTATTAGCAAGGTGGAGGCTTGC
TGGCTGGGGGATAATAGAGG

Downstream 100 bases:

>100_bases
TTTAAGGGCATCATTATAATTAGTATTTAAAACCTATAATAGTTAATTAAAAATATCAACACATATTTAAACACTGGTGA
TTAAACCATGTATTCACTGA

Product: putative nucleic acid-binding protein, containing PIN domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSQNKGITVLLDTNMLLMMANGIPVLEQIEEKLLTKPRYIVIKPVYDELVRIVDSEKPSISRRARLALEIVNRYCEIVDY
AVNPGETVDDAILRYASENNVVVATNDKELRRRLRSRGLPEIYLREESWRIDVEGVPSFY

Sequences:

>Translated_140_residues
MSQNKGITVLLDTNMLLMMANGIPVLEQIEEKLLTKPRYIVIKPVYDELVRIVDSEKPSISRRARLALEIVNRYCEIVDY
AVNPGETVDDAILRYASENNVVVATNDKELRRRLRSRGLPEIYLREESWRIDVEGVPSFY
>Mature_139_residues
SQNKGITVLLDTNMLLMMANGIPVLEQIEEKLLTKPRYIVIKPVYDELVRIVDSEKPSISRRARLALEIVNRYCEIVDYA
VNPGETVDDAILRYASENNVVVATNDKELRRRLRSRGLPEIYLREESWRIDVEGVPSFY

Specific function: Unknown

COG id: COG1412

COG function: function code R; Uncharacterized proteins of PilT N-term./Vapc superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16182; Mature: 16051

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNKGITVLLDTNMLLMMANGIPVLEQIEEKLLTKPRYIVIKPVYDELVRIVDSEKPSI
CCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCH
SRRARLALEIVNRYCEIVDYAVNPGETVDDAILRYASENNVVVATNDKELRRRLRSRGLP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCC
EIYLREESWRIDVEGVPSFY
EEEEECCCEEEEECCCCCCC
>Mature Secondary Structure 
SQNKGITVLLDTNMLLMMANGIPVLEQIEEKLLTKPRYIVIKPVYDELVRIVDSEKPSI
CCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCH
SRRARLALEIVNRYCEIVDYAVNPGETVDDAILRYASENNVVVATNDKELRRRLRSRGLP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCC
EIYLREESWRIDVEGVPSFY
EEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA