Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884644

Identifier: 218884644

GI number: 218884644

Start: 1243441

End: 1243809

Strand: Reverse

Name: 218884644

Synonym: DKAM_1333

Alternate gene names: NA

Gene position: 1243809-1243441 (Counterclockwise)

Preceding gene: 218884645

Following gene: 218884642

Centisome position: 91.11

GC content: 42.55

Gene sequence:

>369_bases
ATGGCGGACACATATAGAATAAATGACTTCAAGAAAAAATACCCGCATCTAGCTAGAGAGGTACTCGAGGAGAAAGATAT
ATCTCTAAAATTAAGCGTGAACATGGGCTTCTCCGATCCGTGGAGCGGATACACACCTACAGTAGTAGACTATATTAGAC
GCTGTAAAAGCCTTGAAGAAGCCTTTGAAGTAGTGGATTACCTTGTAAACCATGGAGAGCTCGATGCAAGAGAGGGAGAG
CAATTAAAAGCCATATTGGAGAGAAATGGCATAGAGTACTTTGGCGGGAGGAAGCAGGATGATTATTACTATAAGGAGGC
TAAGAGGTACTGGGAAAAAATATTCAAGCAGATCCCTGGCACGCATTGA

Upstream 100 bases:

>100_bases
CAGTTGTATATAGGGATGTGGCCTCGAACTCTATTTATTACAGTGATGGAAGAGTAGAGATAAAAACCGGGTTGAATAAA
GATAGAATCAGTGAGAAATA

Downstream 100 bases:

>100_bases
TGTTTAATTATCCTAACTGCTCCTGGATTTAACCGCTACAATCTTAATGATATCATTGTTCTCAAGCACATAATCCTCTC
CAATCCTCCTCTTACTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MADTYRINDFKKKYPHLAREVLEEKDISLKLSVNMGFSDPWSGYTPTVVDYIRRCKSLEEAFEVVDYLVNHGELDAREGE
QLKAILERNGIEYFGGRKQDDYYYKEAKRYWEKIFKQIPGTH

Sequences:

>Translated_122_residues
MADTYRINDFKKKYPHLAREVLEEKDISLKLSVNMGFSDPWSGYTPTVVDYIRRCKSLEEAFEVVDYLVNHGELDAREGE
QLKAILERNGIEYFGGRKQDDYYYKEAKRYWEKIFKQIPGTH
>Mature_121_residues
ADTYRINDFKKKYPHLAREVLEEKDISLKLSVNMGFSDPWSGYTPTVVDYIRRCKSLEEAFEVVDYLVNHGELDAREGEQ
LKAILERNGIEYFGGRKQDDYYYKEAKRYWEKIFKQIPGTH

Specific function: Unknown

COG id: COG4003

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14494; Mature: 14362

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTYRINDFKKKYPHLAREVLEEKDISLKLSVNMGFSDPWSGYTPTVVDYIRRCKSLEE
CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
AFEVVDYLVNHGELDAREGEQLKAILERNGIEYFGGRKQDDYYYKEAKRYWEKIFKQIPG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
TH
CC
>Mature Secondary Structure 
ADTYRINDFKKKYPHLAREVLEEKDISLKLSVNMGFSDPWSGYTPTVVDYIRRCKSLEE
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
AFEVVDYLVNHGELDAREGEQLKAILERNGIEYFGGRKQDDYYYKEAKRYWEKIFKQIPG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
TH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA