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The map label for this gene is rpl15e

Identifier: 218884642

GI number: 218884642

Start: 1241447

End: 1242109

Strand: Reverse

Name: rpl15e

Synonym: DKAM_1331

Alternate gene names: 218884642

Gene position: 1242109-1241447 (Counterclockwise)

Preceding gene: 218884644

Following gene: 218884641

Centisome position: 90.98

GC content: 47.81

Gene sequence:

>663_bases
ATGTCTAAGAGCATGTATCACTATATAGCTGAAGCCTGGAAGGAGAAAAGCAGGGAACTAGAGGCCTTAATCAGGCAGAG
GTTGATCGAGTGGAGGAGAGAGCCCTCAGTTGTTAGATTAGAGAAGCCGACTAGACTCGATAAAGCCAGAGCACTAGGGT
ATAAGGCTAAAGTAGGCTTCATCATCGTAAGGGTAAGGGTTAGAAAAGGAGGGCAGAGAAAGCCCAGGCCGGATAGTGGA
AGAAGACCTAAGAGGATGGGTGTCTATGGTTACGCTCCGGCAAAAAGCCTCAGATTAATAGCTGAGGAGAGGGCTGCAAG
AAAGTTCCCTGGACTAGAAGTGCTTAACAGCTACTATGTTGCCGAGGATGGTAGGTACAAGTGGTACGAGGTAATACTTG
TCGACCCGCATCACCCATCAATATGCAATGATCCAGATGTCAACTGGATATGCGAGCCTCAGAATAGAGGTAGAGTATTC
AGAGGGCTGACCAGTGCTGGGAAGAAGATGAGGGGCCTTAGAAAGAGTCGTGGACTCAGAGGCACAGTGTACTACAAGTG
GAAACGTAAACTGAAAGAGAGAGAGTTGAAGAAGCGTCACGAAGCCAGTAGGGGAGCACGTGATCCATGGCAAATAGCAG
AGAAACTGAAAGAAGAAAAGTAG

Upstream 100 bases:

>100_bases
TCTGGAGGCGGCATCTACGCTTCCTCGCCACAGTTTTAGCCTATTTTTTATAAACCCCGTTAACTCATTATTATATACAC
CTAGGTCACGGTGCTTAGCT

Downstream 100 bases:

>100_bases
TGCTTCAATCCATAGAGATATCTTCTTTTTGCCACGCCACAGAGGATTGCAACAGAGTCCGTGCATCAATACTTAACTTA
ATTCCCCCTGAAATACGGGG

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSKSMYHYIAEAWKEKSRELEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDSG
RRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVF
RGLTSAGKKMRGLRKSRGLRGTVYYKWKRKLKERELKKRHEASRGARDPWQIAEKLKEEK

Sequences:

>Translated_220_residues
MSKSMYHYIAEAWKEKSRELEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDSG
RRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVF
RGLTSAGKKMRGLRKSRGLRGTVYYKWKRKLKERELKKRHEASRGARDPWQIAEKLKEEK
>Mature_219_residues
SKSMYHYIAEAWKEKSRELEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDSGR
RPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFR
GLTSAGKKMRGLRKSRGLRGTVYYKWKRKLKERELKKRHEASRGARDPWQIAEKLKEEK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family

Homologues:

Organism=Homo sapiens, GI15431293, Length=181, Percent_Identity=46.4088397790055, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17541432, Length=194, Percent_Identity=46.3917525773196, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6323057, Length=180, Percent_Identity=46.1111111111111, Blast_Score=149, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6323769, Length=180, Percent_Identity=46.1111111111111, Blast_Score=148, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15E_DESK1 (B8D6C6)

Other databases:

- EMBL:   CP001140
- RefSeq:   YP_002429024.1
- GeneID:   7171382
- GenomeReviews:   CP001140_GR
- KEGG:   dka:DKAM_1331
- HOGENOM:   HBG577798
- OMA:   KWYEVIL
- ProtClustDB:   PRK04243
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00256
- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678
- Gene3D:   G3DSA:3.40.1120.10
- PANTHER:   PTHR11847

Pfam domain/function: PF00827 Ribosomal_L15e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 26002; Mature: 25870

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSMYHYIAEAWKEKSRELEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCEEE
IIVRVRVRKGGQRKPRPDSGRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYV
EEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHC
AEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKKMRGLRKSRGLR
CCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GTVYYKWKRKLKERELKKRHEASRGARDPWQIAEKLKEEK
EEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SKSMYHYIAEAWKEKSRELEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCEEE
IIVRVRVRKGGQRKPRPDSGRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYV
EEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHC
AEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKKMRGLRKSRGLR
CCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GTVYYKWKRKLKERELKKRHEASRGARDPWQIAEKLKEEK
EEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA