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The map label for this gene is fkpB [C]

Identifier: 218884601

GI number: 218884601

Start: 1208573

End: 1209283

Strand: Reverse

Name: fkpB [C]

Synonym: DKAM_1290

Alternate gene names: 218884601

Gene position: 1209283-1208573 (Counterclockwise)

Preceding gene: 218884602

Following gene: 218884599

Centisome position: 88.58

GC content: 44.44

Gene sequence:

>711_bases
ATGCTCATGGTGAGCTATATGGCTTTAAGCAAGGGCGACTTCGTATTGGTGGAATATAATGTACGGGTAAAGGATACAAA
CACATTGCTTGACACCACGGACGCCGAGCTAGCCAAGAAGGAAAACATCTACGAAGCCGATAGGGTCTATGGCCCCACAT
TATTAATCATTGGTAGAGGCTGGCTCAACGAGAATGTTGAAGAAGAACTATTAAAACATGATGTGGGAAGCGAGGTAGAG
GTTGAGCTACCTCCTGAAAAAGCATTTGGTGAGAGATCCCCTGATAAAATCAAGACATTTAGTCTAAGAGAATTCCAGAA
GAGAGGGTACAGCATTAACGTGGGCGACGTCGTCGAGATCGGTGGTGCCCGCGGGGTGGTTAAGAGTATCAGCGGTGGAA
GAGTTACAATCGACTTCAACCACCCGCTCGCCGGTAAGACACTCGTGTATAAGGTTAAAATAGTCAAGAAGCTCGAGAAC
ACCATTGAGAAGATTAAGGCATTATCATCTAGATACCTGAAGATACCTGGTGAGGAAATAGAGGTAAGCCTCAGCGAGGC
AGAGAAAAAACTATTTGTAACGATACCTGGTAAATACCTGTCAAAGAAGGATATAAGTTACTCTAAGATAGCTCTAGCAG
CAGACATCATGGAGTTATTCAAGGATACAGTCTCATCCATAGTCTTCCAGGAAGTAGTAAGCAGGAGCTAA

Upstream 100 bases:

>100_bases
GAATACTATAAAGCAATATAGGTATTGATGGAAAGGTTAAATTTAAAATAAGACTTAAGTCTTTTAATGTATCCCGGTTG
AAACACTATATACAACACGA

Downstream 100 bases:

>100_bases
AAGTTTTTGAAATCAAATAATACCTGTCTCCCTTAAGATCCTGTAAGCAGCCTCCTGTGTTAACCCTGTCTCGCCAAGTA
TAGTGTATCTTTCAGGCCTA

Product: FKBP type peptidyl-prolyl cis-trans isomerase

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MLMVSYMALSKGDFVLVEYNVRVKDTNTLLDTTDAELAKKENIYEADRVYGPTLLIIGRGWLNENVEEELLKHDVGSEVE
VELPPEKAFGERSPDKIKTFSLREFQKRGYSINVGDVVEIGGARGVVKSISGGRVTIDFNHPLAGKTLVYKVKIVKKLEN
TIEKIKALSSRYLKIPGEEIEVSLSEAEKKLFVTIPGKYLSKKDISYSKIALAADIMELFKDTVSSIVFQEVVSRS

Sequences:

>Translated_236_residues
MLMVSYMALSKGDFVLVEYNVRVKDTNTLLDTTDAELAKKENIYEADRVYGPTLLIIGRGWLNENVEEELLKHDVGSEVE
VELPPEKAFGERSPDKIKTFSLREFQKRGYSINVGDVVEIGGARGVVKSISGGRVTIDFNHPLAGKTLVYKVKIVKKLEN
TIEKIKALSSRYLKIPGEEIEVSLSEAEKKLFVTIPGKYLSKKDISYSKIALAADIMELFKDTVSSIVFQEVVSRS
>Mature_236_residues
MLMVSYMALSKGDFVLVEYNVRVKDTNTLLDTTDAELAKKENIYEADRVYGPTLLIIGRGWLNENVEEELLKHDVGSEVE
VELPPEKAFGERSPDKIKTFSLREFQKRGYSINVGDVVEIGGARGVVKSISGGRVTIDFNHPLAGKTLVYKVKIVKKLEN
TIEKIKALSSRYLKIPGEEIEVSLSEAEKKLFVTIPGKYLSKKDISYSKIALAADIMELFKDTVSSIVFQEVVSRS

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=147, Percent_Identity=32.6530612244898, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 26395; Mature: 26395

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMVSYMALSKGDFVLVEYNVRVKDTNTLLDTTDAELAKKENIYEADRVYGPTLLIIGRG
CEEEEEEEECCCCEEEEEEEEEEECCCCEECCCCHHHHHHCCCCHHHHCCCCEEEEEECC
WLNENVEEELLKHDVGSEVEVELPPEKAFGERSPDKIKTFSLREFQKRGYSINVGDVVEI
CCCCCHHHHHHHHCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEE
GGARGVVKSISGGRVTIDFNHPLAGKTLVYKVKIVKKLENTIEKIKALSSRYLKIPGEEI
CCCCHHHHCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCEEECCCHHE
EVSLSEAEKKLFVTIPGKYLSKKDISYSKIALAADIMELFKDTVSSIVFQEVVSRS
EEEEECCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLMVSYMALSKGDFVLVEYNVRVKDTNTLLDTTDAELAKKENIYEADRVYGPTLLIIGRG
CEEEEEEEECCCCEEEEEEEEEEECCCCEECCCCHHHHHHCCCCHHHHCCCCEEEEEECC
WLNENVEEELLKHDVGSEVEVELPPEKAFGERSPDKIKTFSLREFQKRGYSINVGDVVEI
CCCCCHHHHHHHHCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEE
GGARGVVKSISGGRVTIDFNHPLAGKTLVYKVKIVKKLENTIEKIKALSSRYLKIPGEEI
CCCCHHHHCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCEEECCCHHE
EVSLSEAEKKLFVTIPGKYLSKKDISYSKIALAADIMELFKDTVSSIVFQEVVSRS
EEEEECCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]