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The map label for this gene is 218884602

Identifier: 218884602

GI number: 218884602

Start: 1209363

End: 1209842

Strand: Reverse

Name: 218884602

Synonym: DKAM_1291

Alternate gene names: NA

Gene position: 1209842-1209363 (Counterclockwise)

Preceding gene: 218884603

Following gene: 218884601

Centisome position: 88.62

GC content: 44.17

Gene sequence:

>480_bases
ATGAAACGCTACCCGCTCTCCAAGAAGGATAAGAAGCAATTCATCAAGGAGTTCCAGAGGTATGGGTTGCCGGTTTCAGA
GGAGGATCTATTCGAGTACTATGAGGACGGGGGCAATATATTTATACTTGTAAATAAGACACCCGCTCTTCTCAAACACG
GTGATCAATGGATACCCTGTCTAAGATACCTCCTTAAAAACCCTCAACACTCAATCACGCTGCCAAGCATCATAGTTGAT
AAAGGCGCTGTACAAGCGCTTCTAAGAGGAGCCGACTTAATGGTGCCTGGTATAAGGAGTATTATAGGCGACTTCAAAGT
CGGCGATATAGTCGTCATCATAGATGAAGAGACCAGGAGGTCTATCGCTATTGGATCAGCGCTAATAGACTCGGAGGTCA
TTAAGAACGGTAGTGTTAAGAAGTGGAAGGCAGTTAAAATCCTGCACCACCTCAACGATGAATACTATAAAGCAATATAG

Upstream 100 bases:

>100_bases
TTAACGAGCTCGCCTGAGACCCGTTATAGTGGCTTGGTTCTGGTTTACACCTACTTTTCAACCAATAAATACAACCTATG
GCTAAACTAGGTGTTAAACC

Downstream 100 bases:

>100_bases
GTATTGATGGAAAGGTTAAATTTAAAATAAGACTTAAGTCTTTTAATGTATCCCGGTTGAAACACTATATACAACACGAA
TGCTCATGGTGAGCTATATG

Product: PUA domain containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKRYPLSKKDKKQFIKEFQRYGLPVSEEDLFEYYEDGGNIFILVNKTPALLKHGDQWIPCLRYLLKNPQHSITLPSIIVD
KGAVQALLRGADLMVPGIRSIIGDFKVGDIVVIIDEETRRSIAIGSALIDSEVIKNGSVKKWKAVKILHHLNDEYYKAI

Sequences:

>Translated_159_residues
MKRYPLSKKDKKQFIKEFQRYGLPVSEEDLFEYYEDGGNIFILVNKTPALLKHGDQWIPCLRYLLKNPQHSITLPSIIVD
KGAVQALLRGADLMVPGIRSIIGDFKVGDIVVIIDEETRRSIAIGSALIDSEVIKNGSVKKWKAVKILHHLNDEYYKAI
>Mature_159_residues
MKRYPLSKKDKKQFIKEFQRYGLPVSEEDLFEYYEDGGNIFILVNKTPALLKHGDQWIPCLRYLLKNPQHSITLPSIIVD
KGAVQALLRGADLMVPGIRSIIGDFKVGDIVVIIDEETRRSIAIGSALIDSEVIKNGSVKKWKAVKILHHLNDEYYKAI

Specific function: Unknown

COG id: COG2016

COG function: function code J; Predicted RNA-binding protein (contains PUA domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320844, Length=105, Percent_Identity=36.1904761904762, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022430
- InterPro:   IPR015266
- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR016437
- InterPro:   IPR004521 [H]

Pfam domain/function: PF01472 PUA [H]

EC number: NA

Molecular weight: Translated: 18108; Mature: 18108

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYPLSKKDKKQFIKEFQRYGLPVSEEDLFEYYEDGGNIFILVNKTPALLKHGDQWIPC
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHCCCCHHHH
LRYLLKNPQHSITLPSIIVDKGAVQALLRGADLMVPGIRSIIGDFKVGDIVVIIDEETRR
HHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCCCH
SIAIGSALIDSEVIKNGSVKKWKAVKILHHLNDEYYKAI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure
MKRYPLSKKDKKQFIKEFQRYGLPVSEEDLFEYYEDGGNIFILVNKTPALLKHGDQWIPC
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHCCCCHHHH
LRYLLKNPQHSITLPSIIVDKGAVQALLRGADLMVPGIRSIIGDFKVGDIVVIIDEETRR
HHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCCCH
SIAIGSALIDSEVIKNGSVKKWKAVKILHHLNDEYYKAI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]