Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884583

Identifier: 218884583

GI number: 218884583

Start: 1189191

End: 1190123

Strand: Reverse

Name: 218884583

Synonym: DKAM_1272

Alternate gene names: NA

Gene position: 1190123-1189191 (Counterclockwise)

Preceding gene: 218884584

Following gene: 218884579

Centisome position: 87.17

GC content: 42.44

Gene sequence:

>933_bases
ATGAGCATAGAGGTGAAGATATCCCTTCCCGGCCTAGCCGGGATAATACTTATCATAGCTTCAATAACTGTGGGAATATA
TGTGTTTCAAATGGATTCATCTCTCACATATACTTGGATAGTACCGCTTAACAGCGTGCAGGTGATTCATTTATACTTCA
AGCAGAACATCGGGTTAGCACTGGTTGATGTTGGGAAAGGCTCCAACTATATCACCGTATCAAGCGGGGCTGCTTCGACG
TTAACTCTGCTCCCAGCTTCTTCAAGTTATGCTGTGATCACTGCTAGAGGCGTAAGCATATATGTTGAAACAGTTAACGC
TATAGGCACACTCATAATAGTTGCAGCAGCATGGATTGCTGTGAGAAGAAGGAGTGGGCTGAAACTAGCTATCATAATGA
CCGTGTTATCGATGCTTGCAGCCTCTAATGCATTGGCTCAAATATTCTACTTGAACACTGGTTTAGGCTCCGGCTACAGC
GTTAACGAACGGGGATTCTCTATACCTTTCTCCCAGCTGGAGCCAGTGGTATTAGGGAATGAAACATACAGATACTCATA
TGTTTTAAGGGATACTGTAAACGGGGTGGCACTCGTTAACCTATCAATTCAGGTCAGGGATCAGTATATACCATTGATTA
TTGTAAGAGCCTATAATAACCAGGGCTCTATAGATATACCATTGTCGACATCCATACCCAGCGGTGGCCCTATAACATAT
AGTGCTGCATCATATCTATCCAGCGGCAATCTAACAATATATGTTCTCTCAATGGGGCAGCTGGAAAATACTACTTTGAA
CTATTATAAAGTAGAGTTCCAGAGAATAAGTGATTCGCCACCAATACTTGTAACCCTATTACCATTGATTACGCTGGTAG
CATCCTTTGCGTCATGCATACTGTTATTAAGGATAACTATGTTGAGGCAGTGA

Upstream 100 bases:

>100_bases
AAACTCGTTTACTCACTCATCAATCCACCTAGGGCCTGAACTATATTCTTTTAATCCTGCTTAATAGTAGTATATTTAGT
CCAGGGAAATGGTGTATTAA

Downstream 100 bases:

>100_bases
CCCAACGACTGAACAAATTATTCACCCCGAGTAATCCTTCTAACTTTTTTACCACGTGGGGAAGGAATTATCTCGAGCTT
TGCATCAGGGAATTTAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSIEVKISLPGLAGIILIIASITVGIYVFQMDSSLTYTWIVPLNSVQVIHLYFKQNIGLALVDVGKGSNYITVSSGAAST
LTLLPASSSYAVITARGVSIYVETVNAIGTLIIVAAAWIAVRRRSGLKLAIIMTVLSMLAASNALAQIFYLNTGLGSGYS
VNERGFSIPFSQLEPVVLGNETYRYSYVLRDTVNGVALVNLSIQVRDQYIPLIIVRAYNNQGSIDIPLSTSIPSGGPITY
SAASYLSSGNLTIYVLSMGQLENTTLNYYKVEFQRISDSPPILVTLLPLITLVASFASCILLLRITMLRQ

Sequences:

>Translated_310_residues
MSIEVKISLPGLAGIILIIASITVGIYVFQMDSSLTYTWIVPLNSVQVIHLYFKQNIGLALVDVGKGSNYITVSSGAAST
LTLLPASSSYAVITARGVSIYVETVNAIGTLIIVAAAWIAVRRRSGLKLAIIMTVLSMLAASNALAQIFYLNTGLGSGYS
VNERGFSIPFSQLEPVVLGNETYRYSYVLRDTVNGVALVNLSIQVRDQYIPLIIVRAYNNQGSIDIPLSTSIPSGGPITY
SAASYLSSGNLTIYVLSMGQLENTTLNYYKVEFQRISDSPPILVTLLPLITLVASFASCILLLRITMLRQ
>Mature_309_residues
SIEVKISLPGLAGIILIIASITVGIYVFQMDSSLTYTWIVPLNSVQVIHLYFKQNIGLALVDVGKGSNYITVSSGAASTL
TLLPASSSYAVITARGVSIYVETVNAIGTLIIVAAAWIAVRRRSGLKLAIIMTVLSMLAASNALAQIFYLNTGLGSGYSV
NERGFSIPFSQLEPVVLGNETYRYSYVLRDTVNGVALVNLSIQVRDQYIPLIIVRAYNNQGSIDIPLSTSIPSGGPITYS
AASYLSSGNLTIYVLSMGQLENTTLNYYKVEFQRISDSPPILVTLLPLITLVASFASCILLLRITMLRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33419; Mature: 33287

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEVKISLPGLAGIILIIASITVGIYVFQMDSSLTYTWIVPLNSVQVIHLYFKQNIGLA
CEEEEEEECCCHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCEEEEEEEEECCCCEE
LVDVGKGSNYITVSSGAASTLTLLPASSSYAVITARGVSIYVETVNAIGTLIIVAAAWIA
EEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHH
VRRRSGLKLAIIMTVLSMLAASNALAQIFYLNTGLGSGYSVNERGFSIPFSQLEPVVLGN
HHHCCCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCCCCCHHHCCCEEECC
ETYRYSYVLRDTVNGVALVNLSIQVRDQYIPLIIVRAYNNQGSIDIPLSTSIPSGGPITY
CCEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEECCCCCEEEEEECCCCCCCCEEE
SAASYLSSGNLTIYVLSMGQLENTTLNYYKVEFQRISDSPPILVTLLPLITLVASFASCI
EHHHHHCCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LLLRITMLRQ
HHHHHHHHCC
>Mature Secondary Structure 
SIEVKISLPGLAGIILIIASITVGIYVFQMDSSLTYTWIVPLNSVQVIHLYFKQNIGLA
EEEEEEECCCHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCEEEEEEEEECCCCEE
LVDVGKGSNYITVSSGAASTLTLLPASSSYAVITARGVSIYVETVNAIGTLIIVAAAWIA
EEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHH
VRRRSGLKLAIIMTVLSMLAASNALAQIFYLNTGLGSGYSVNERGFSIPFSQLEPVVLGN
HHHCCCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCCCCCHHHCCCEEECC
ETYRYSYVLRDTVNGVALVNLSIQVRDQYIPLIIVRAYNNQGSIDIPLSTSIPSGGPITY
CCEEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEEEECCCCCEEEEEECCCCCCCCEEE
SAASYLSSGNLTIYVLSMGQLENTTLNYYKVEFQRISDSPPILVTLLPLITLVASFASCI
EHHHHHCCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LLLRITMLRQ
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA