Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884584

Identifier: 218884584

GI number: 218884584

Start: 1190262

End: 1192979

Strand: Reverse

Name: 218884584

Synonym: DKAM_1273

Alternate gene names: NA

Gene position: 1192979-1190262 (Counterclockwise)

Preceding gene: 218884585

Following gene: 218884583

Centisome position: 87.38

GC content: 44.92

Gene sequence:

>2718_bases
ATGTCCAATAGGATAATATCCATCATATTGGCTCTAGCCCTATTAACACCCATGTTAGTGAACCTAGCAGTACTAGTACC
AGTAAACGCCCAGGGAGGAATAATACAAGCTGTAAGAGGCGATGGACCCGATGGGAAGGGTGTATACCCTGGTGGCATAA
TAACTGTGACCATTAACGTCCCCTTCGCTTCATCTGTAACTATAGAGGTATCCAATGCAAACACCGGAGAGGTATATGTT
ACACAACAGTTCTACCCACCGACACCCGGTACATACAATGTAACGGTTCAAATACCCAAGCTACTGCTAAACATCGGTAC
AGCTGATCCACCAACACTATTAGTAACCGTGTCTATTCCATTCATCGGATCCGATCAGGCAACCATCTACGTATACCCAT
TAATAGAGGTTTCACCATCAGCCACTACAATAGTTGATGGGCGTGGAAACTTCAAATCTGTGAGCGTTGACATATATGGT
TTACCAGAGGGAACCGCTGTAAACACTATATTCTTTAATGATACATCATATAATGCAGGCATTACAGCCGACTCCTCCGG
TCACGCTGGAACAACCATACAGTTCTCACCATCATTCCTACTGCCAGGCGGCTTATACATTGTAACCTCTGATGCAACTG
TAGCATTCTCAGGTATGACGAAGAACGCCACTCTAACCATACTACCACAGGCAGTGTTATCACCCAACGAGGGTAATGGT
AGGGATGTAGAGTCAATCTCACTAGTAGGCTACGGCTTCCCAGCCAATGCCAATATTACAGTAGTAGAGTTATACAACAC
TAACTTCACTAACGTAGTATACGTATTCAACATAACCGGTGGACTACTTGCTGATGCAAACGGCTTCTTCAATATAACAG
ACCTGAAGACCTATCTAGCCACCAATATGACTGCAGGCTTATACATACCCAGAGTGACATTAAGCAGTGGTGTGAAATAC
GAGTTCAGGAACACCTATTACCTGGTTAGACCACTGTTATGCTATGTGAGCGGCGGTGTACCACAGTGTGACAGGCCAGC
CCCAATGGTGTTGCCGGGTCAGACGATCACTATAGTGGCTTATGGATACGGCCCTGGAAAGGAATGGGGCTACAATGCTA
ACTTCCTCAATGTCTCACTAGACAAGATAACATGGCTTGCAACCGATATACCTCTAGGCAAGGATGGTAATGTAACATTC
AGTATAACTATTCCACTAGGAACCACATACGGTGCCCACTACATATGGGGCATCGATATCTGGGACTACGAGTACAGCTT
AGCAGTCGTGGTAGGTACTGCCGCATACTGGCAGGCATTAAACCCCGTGTCAAACCAGCCACTACCAGATAACAAGGTAA
GCGCTACACTACCAGGTATGACTACATCATTCATCGTGTGTCCATGTGAAACCGTTGTTGGCACTGGATACTGTAGCGAG
TGTACAATATATGGTGGTGAATGCCAGTACCTAGGTGATATAATCCAGGTGACAGCGTATGGTTTACAGCCAGGTGAAAC
TGTTAACGTGTACTTTGGCGACGTGCTAGTGATAGAGAATGCTATAACCGATAACAATGGAGCTCTCACCGTGAAATTCG
TTGTCCCAACACTACCTGAAGGCGAGTATGTTATAAGGCTAGTCGGCAGCGTCACAGGTGAACACTTGGTGAACTTCTCA
CTGAACCTGAACAATTATGCTAACCCAGTTATAACTCCGAAGATACTGTTGGCCTCGCTCACAGGTGACTACACGCCTGT
GATTGTTGGAAGCGGTATAGTTAGAGTATTCGGTACCGGATTCACTCCCGGTGTGACATTCGCAGGTATACTGGTTAATG
ACACCGATGCATTGCTAGCTGTCACCACTAATGTACAGAGGTGGACTGCTGACAGCAATGGTGTCTTAACAAGCCAGTTC
ACCAGCATACTTGGACTGTGGATACCGATGGTACATCCAGGCAAATATGCTGTGTCACTAATCTATGTAAAAGGCACAAG
CTTCTATAAGAGCTTGCCAGGATACGTATATGTAGTCAACAACATATCTAGACTAGCTACAGCTGATGATGTCTCGAATA
TCTTAAATGGAATCAATAATGTAGCAAATGCCGTAAACAATGTAGCCAATACTGTTTCCAGTGTTTCATCCACGGTAGGC
AGCATACAGAACACCGTGAACACTATACTCACTAGGCTCGACAACCTGGCCACTAAGAGCGATGTCAACGCTGTAGCAAG
CAAGGTGGACACTATCGGGGGTAAGGTTGATTCATTGTCAACGAGCATAAGCAATGTTGTAAACCAGCTGAACTCTATAA
CCTCACAACTATCATCAGCAGTACAGAGCCTGAGCACTGTATCTAGTGATGTATCATCCATAAAGAACACCGTAAACAAT
ATACAGAGTAGCATTGACACTATTAGCAGTAAGTTGAACGAGGCAGCCACTAAGAGCGATGTCAACGCTGTAGCAAGCAA
GGTTGATAACGTCTCAAGTAGTGTAAGCAGTATACAGAACAGTGTAAGTAGTATACAGAACGCTCTGAATACTGTAAGCG
GTAAGGTTGATACAGCTATAAGCAAGGCTGATACCGCAAGTGCCTCAGCTAGTAATGCTTTCTACATAGGAATAGTTGCA
GTGATATTCGCCCTATTGGCAACGGTATTCGCTCTACTGGCATACCTGACTGTTAGAAGAAGCATTGTCTCGAAATAA

Upstream 100 bases:

>100_bases
AGATAATGGTGTATACACATGTATACACTATGCATATACTTGTGTAAACATTCATCTTATAACTCTGGAAAGTAATCAGA
GAAGATTTGGTGAAGTATGT

Downstream 100 bases:

>100_bases
CTAGCCCAAACTAGCCTAAACCTTTTTTAAACCTATTTAAACTCGTTTACTCACTCATCAATCCACCTAGGGCCTGAACT
ATATTCTTTTAATCCTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 905; Mature: 904

Protein sequence:

>905_residues
MSNRIISIILALALLTPMLVNLAVLVPVNAQGGIIQAVRGDGPDGKGVYPGGIITVTINVPFASSVTIEVSNANTGEVYV
TQQFYPPTPGTYNVTVQIPKLLLNIGTADPPTLLVTVSIPFIGSDQATIYVYPLIEVSPSATTIVDGRGNFKSVSVDIYG
LPEGTAVNTIFFNDTSYNAGITADSSGHAGTTIQFSPSFLLPGGLYIVTSDATVAFSGMTKNATLTILPQAVLSPNEGNG
RDVESISLVGYGFPANANITVVELYNTNFTNVVYVFNITGGLLADANGFFNITDLKTYLATNMTAGLYIPRVTLSSGVKY
EFRNTYYLVRPLLCYVSGGVPQCDRPAPMVLPGQTITIVAYGYGPGKEWGYNANFLNVSLDKITWLATDIPLGKDGNVTF
SITIPLGTTYGAHYIWGIDIWDYEYSLAVVVGTAAYWQALNPVSNQPLPDNKVSATLPGMTTSFIVCPCETVVGTGYCSE
CTIYGGECQYLGDIIQVTAYGLQPGETVNVYFGDVLVIENAITDNNGALTVKFVVPTLPEGEYVIRLVGSVTGEHLVNFS
LNLNNYANPVITPKILLASLTGDYTPVIVGSGIVRVFGTGFTPGVTFAGILVNDTDALLAVTTNVQRWTADSNGVLTSQF
TSILGLWIPMVHPGKYAVSLIYVKGTSFYKSLPGYVYVVNNISRLATADDVSNILNGINNVANAVNNVANTVSSVSSTVG
SIQNTVNTILTRLDNLATKSDVNAVASKVDTIGGKVDSLSTSISNVVNQLNSITSQLSSAVQSLSTVSSDVSSIKNTVNN
IQSSIDTISSKLNEAATKSDVNAVASKVDNVSSSVSSIQNSVSSIQNALNTVSGKVDTAISKADTASASASNAFYIGIVA
VIFALLATVFALLAYLTVRRSIVSK

Sequences:

>Translated_905_residues
MSNRIISIILALALLTPMLVNLAVLVPVNAQGGIIQAVRGDGPDGKGVYPGGIITVTINVPFASSVTIEVSNANTGEVYV
TQQFYPPTPGTYNVTVQIPKLLLNIGTADPPTLLVTVSIPFIGSDQATIYVYPLIEVSPSATTIVDGRGNFKSVSVDIYG
LPEGTAVNTIFFNDTSYNAGITADSSGHAGTTIQFSPSFLLPGGLYIVTSDATVAFSGMTKNATLTILPQAVLSPNEGNG
RDVESISLVGYGFPANANITVVELYNTNFTNVVYVFNITGGLLADANGFFNITDLKTYLATNMTAGLYIPRVTLSSGVKY
EFRNTYYLVRPLLCYVSGGVPQCDRPAPMVLPGQTITIVAYGYGPGKEWGYNANFLNVSLDKITWLATDIPLGKDGNVTF
SITIPLGTTYGAHYIWGIDIWDYEYSLAVVVGTAAYWQALNPVSNQPLPDNKVSATLPGMTTSFIVCPCETVVGTGYCSE
CTIYGGECQYLGDIIQVTAYGLQPGETVNVYFGDVLVIENAITDNNGALTVKFVVPTLPEGEYVIRLVGSVTGEHLVNFS
LNLNNYANPVITPKILLASLTGDYTPVIVGSGIVRVFGTGFTPGVTFAGILVNDTDALLAVTTNVQRWTADSNGVLTSQF
TSILGLWIPMVHPGKYAVSLIYVKGTSFYKSLPGYVYVVNNISRLATADDVSNILNGINNVANAVNNVANTVSSVSSTVG
SIQNTVNTILTRLDNLATKSDVNAVASKVDTIGGKVDSLSTSISNVVNQLNSITSQLSSAVQSLSTVSSDVSSIKNTVNN
IQSSIDTISSKLNEAATKSDVNAVASKVDNVSSSVSSIQNSVSSIQNALNTVSGKVDTAISKADTASASASNAFYIGIVA
VIFALLATVFALLAYLTVRRSIVSK
>Mature_904_residues
SNRIISIILALALLTPMLVNLAVLVPVNAQGGIIQAVRGDGPDGKGVYPGGIITVTINVPFASSVTIEVSNANTGEVYVT
QQFYPPTPGTYNVTVQIPKLLLNIGTADPPTLLVTVSIPFIGSDQATIYVYPLIEVSPSATTIVDGRGNFKSVSVDIYGL
PEGTAVNTIFFNDTSYNAGITADSSGHAGTTIQFSPSFLLPGGLYIVTSDATVAFSGMTKNATLTILPQAVLSPNEGNGR
DVESISLVGYGFPANANITVVELYNTNFTNVVYVFNITGGLLADANGFFNITDLKTYLATNMTAGLYIPRVTLSSGVKYE
FRNTYYLVRPLLCYVSGGVPQCDRPAPMVLPGQTITIVAYGYGPGKEWGYNANFLNVSLDKITWLATDIPLGKDGNVTFS
ITIPLGTTYGAHYIWGIDIWDYEYSLAVVVGTAAYWQALNPVSNQPLPDNKVSATLPGMTTSFIVCPCETVVGTGYCSEC
TIYGGECQYLGDIIQVTAYGLQPGETVNVYFGDVLVIENAITDNNGALTVKFVVPTLPEGEYVIRLVGSVTGEHLVNFSL
NLNNYANPVITPKILLASLTGDYTPVIVGSGIVRVFGTGFTPGVTFAGILVNDTDALLAVTTNVQRWTADSNGVLTSQFT
SILGLWIPMVHPGKYAVSLIYVKGTSFYKSLPGYVYVVNNISRLATADDVSNILNGINNVANAVNNVANTVSSVSSTVGS
IQNTVNTILTRLDNLATKSDVNAVASKVDTIGGKVDSLSTSISNVVNQLNSITSQLSSAVQSLSTVSSDVSSIKNTVNNI
QSSIDTISSKLNEAATKSDVNAVASKVDNVSSSVSSIQNSVSSIQNALNTVSGKVDTAISKADTASASASNAFYIGIVAV
IFALLATVFALLAYLTVRRSIVSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95330; Mature: 95199

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRIISIILALALLTPMLVNLAVLVPVNAQGGIIQAVRGDGPDGKGVYPGGIITVTINV
CCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEC
PFASSVTIEVSNANTGEVYVTQQFYPPTPGTYNVTVQIPKLLLNIGTADPPTLLVTVSIP
CCCCEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECHHHEECCCCCCCEEEEEEEEC
FIGSDQATIYVYPLIEVSPSATTIVDGRGNFKSVSVDIYGLPEGTAVNTIFFNDTSYNAG
EECCCCCEEEEEEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCC
ITADSSGHAGTTIQFSPSFLLPGGLYIVTSDATVAFSGMTKNATLTILPQAVLSPNEGNG
EECCCCCCCCCEEEECCCEECCCCEEEEECCCEEEEECCCCCCEEEEEEHHHCCCCCCCC
RDVESISLVGYGFPANANITVVELYNTNFTNVVYVFNITGGLLADANGFFNITDLKTYLA
CCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCEEECCCCCEEEHHHHHHHH
TNMTAGLYIPRVTLSSGVKYEFRNTYYLVRPLLCYVSGGVPQCDRPAPMVLPGQTITIVA
CCCCCCEEEEEEEECCCCEEEECCCEEHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEE
YGYGPGKEWGYNANFLNVSLDKITWLATDIPLGKDGNVTFSITIPLGTTYGAHYIWGIDI
EECCCCCCCCCCCCEEEEEHHHEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEE
WDYEYSLAVVVGTAAYWQALNPVSNQPLPDNKVSATLPGMTTSFIVCPCETVVGTGYCSE
ECCCEEEEEEEECHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEECHHHHCCCCCCC
CTIYGGECQYLGDIIQVTAYGLQPGETVNVYFGDVLVIENAITDNNGALTVKFVVPTLPE
CEEECCCHHHHHHHHHHEEECCCCCCEEEEEECCEEEEEEEEECCCCEEEEEEEECCCCC
GEYVIRLVGSVTGEHLVNFSLNLNNYANPVITPKILLASLTGDYTPVIVGSGIVRVFGTG
CCEEEEEEHHCCCCEEEEEEEECCCCCCCCCCHHHHEEHHCCCCCEEEECCCEEEEEECC
FTPGVTFAGILVNDTDALLAVTTNVQRWTADSNGVLTSQFTSILGLWIPMVHPGKYAVSL
CCCCCEEEEEEEECCCEEEEEEECCEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEEE
IYVKGTSFYKSLPGYVYVVNNISRLATADDVSNILNGINNVANAVNNVANTVSSVSSTVG
EEEECCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIQNTVNTILTRLDNLATKSDVNAVASKVDTIGGKVDSLSTSISNVVNQLNSITSQLSSA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VQSLSTVSSDVSSIKNTVNNIQSSIDTISSKLNEAATKSDVNAVASKVDNVSSSVSSIQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVSSIQNALNTVSGKVDTAISKADTASASASNAFYIGIVAVIFALLATVFALLAYLTVRR
HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SIVSK
HHHCC
>Mature Secondary Structure 
SNRIISIILALALLTPMLVNLAVLVPVNAQGGIIQAVRGDGPDGKGVYPGGIITVTINV
CCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEC
PFASSVTIEVSNANTGEVYVTQQFYPPTPGTYNVTVQIPKLLLNIGTADPPTLLVTVSIP
CCCCEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECHHHEECCCCCCCEEEEEEEEC
FIGSDQATIYVYPLIEVSPSATTIVDGRGNFKSVSVDIYGLPEGTAVNTIFFNDTSYNAG
EECCCCCEEEEEEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCC
ITADSSGHAGTTIQFSPSFLLPGGLYIVTSDATVAFSGMTKNATLTILPQAVLSPNEGNG
EECCCCCCCCCEEEECCCEECCCCEEEEECCCEEEEECCCCCCEEEEEEHHHCCCCCCCC
RDVESISLVGYGFPANANITVVELYNTNFTNVVYVFNITGGLLADANGFFNITDLKTYLA
CCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCEEECCCCCEEEHHHHHHHH
TNMTAGLYIPRVTLSSGVKYEFRNTYYLVRPLLCYVSGGVPQCDRPAPMVLPGQTITIVA
CCCCCCEEEEEEEECCCCEEEECCCEEHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEE
YGYGPGKEWGYNANFLNVSLDKITWLATDIPLGKDGNVTFSITIPLGTTYGAHYIWGIDI
EECCCCCCCCCCCCEEEEEHHHEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEE
WDYEYSLAVVVGTAAYWQALNPVSNQPLPDNKVSATLPGMTTSFIVCPCETVVGTGYCSE
ECCCEEEEEEEECHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEEECHHHHCCCCCCC
CTIYGGECQYLGDIIQVTAYGLQPGETVNVYFGDVLVIENAITDNNGALTVKFVVPTLPE
CEEECCCHHHHHHHHHHEEECCCCCCEEEEEECCEEEEEEEEECCCCEEEEEEEECCCCC
GEYVIRLVGSVTGEHLVNFSLNLNNYANPVITPKILLASLTGDYTPVIVGSGIVRVFGTG
CCEEEEEEHHCCCCEEEEEEEECCCCCCCCCCHHHHEEHHCCCCCEEEECCCEEEEEECC
FTPGVTFAGILVNDTDALLAVTTNVQRWTADSNGVLTSQFTSILGLWIPMVHPGKYAVSL
CCCCCEEEEEEEECCCEEEEEEECCEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEEE
IYVKGTSFYKSLPGYVYVVNNISRLATADDVSNILNGINNVANAVNNVANTVSSVSSTVG
EEEECCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIQNTVNTILTRLDNLATKSDVNAVASKVDTIGGKVDSLSTSISNVVNQLNSITSQLSSA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VQSLSTVSSDVSSIKNTVNNIQSSIDTISSKLNEAATKSDVNAVASKVDNVSSSVSSIQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVSSIQNALNTVSGKVDTAISKADTASASASNAFYIGIVAVIFALLATVFALLAYLTVRR
HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SIVSK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA