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The map label for this gene is 218884575

Identifier: 218884575

GI number: 218884575

Start: 1183250

End: 1183702

Strand: Reverse

Name: 218884575

Synonym: DKAM_1264

Alternate gene names: NA

Gene position: 1183702-1183250 (Counterclockwise)

Preceding gene: 218884576

Following gene: 218884573

Centisome position: 86.7

GC content: 44.81

Gene sequence:

>453_bases
ATGTATATAGCCTTATATTCACCGTCAAGTATTCAGAAGCTCGTTGACTTCATAAAGACAGTGTACGCTATAAAGGGGCT
AGTACCAGTGGTGATCAAGCCTATTGGGGCAGCTGCCCAGATAGGTGTACCCGAGGCCCATAAAATAGCCATTAAGCAAG
GCAAGCCCTTCATAGTTCTACCGGAGATAAGTGATCTCTCCAATGTACTGGGATGCAACAGGATACTTTACATCAATGAG
TCCGGGAGAGAAGTACCATTAGCTGAAGTGCTTGATCTAGAGGAGAGAGTTGCAATACTAGTGAGCTCCGGTGAGCAAGA
ACCGAGCAGGAAAGAAGTGGAAAACACTGACTCAGTGTGGCTTAGAGAAGTCCCCAGAGGTCTACCTGTTACAGGATTAA
TCGGGATACTAGTATATGAGTTACATAGGAAAAAACAAAATGCACCGATCTGA

Upstream 100 bases:

>100_bases
GGATGAACAGTATAACATGGTGGGAGAAGCTGTACCGGCTCCCCTTGCAAAAGCTATAGCATGGTATCTCGCCGGGAAGC
TGGATGAGGAGGTGACGTAA

Downstream 100 bases:

>100_bases
GCTCCTCCAGCCCTAAAGAGCGGGGCTTTCAGTTGTAATTCCTTCACCAAGTCACATAGGTTACCTTAATGTTTTTAGCT
ATATCATACAACATCATCCA

Product: RecB-family nuclease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MYIALYSPSSIQKLVDFIKTVYAIKGLVPVVIKPIGAAAQIGVPEAHKIAIKQGKPFIVLPEISDLSNVLGCNRILYINE
SGREVPLAEVLDLEERVAILVSSGEQEPSRKEVENTDSVWLREVPRGLPVTGLIGILVYELHRKKQNAPI

Sequences:

>Translated_150_residues
MYIALYSPSSIQKLVDFIKTVYAIKGLVPVVIKPIGAAAQIGVPEAHKIAIKQGKPFIVLPEISDLSNVLGCNRILYINE
SGREVPLAEVLDLEERVAILVSSGEQEPSRKEVENTDSVWLREVPRGLPVTGLIGILVYELHRKKQNAPI
>Mature_150_residues
MYIALYSPSSIQKLVDFIKTVYAIKGLVPVVIKPIGAAAQIGVPEAHKIAIKQGKPFIVLPEISDLSNVLGCNRILYINE
SGREVPLAEVLDLEERVAILVSSGEQEPSRKEVENTDSVWLREVPRGLPVTGLIGILVYELHRKKQNAPI

Specific function: Unknown

COG id: COG4080

COG function: function code L; RecB-family nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1199 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018665 [H]

Pfam domain/function: PF09895 DUF2122 [H]

EC number: NA

Molecular weight: Translated: 16492; Mature: 16492

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIALYSPSSIQKLVDFIKTVYAIKGLVPVVIKPIGAAAQIGVPEAHKIAIKQGKPFIVL
CEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCCCCEEEEECCCCEEEE
PEISDLSNVLGCNRILYINESGREVPLAEVLDLEERVAILVSSGEQEPSRKEVENTDSVW
CCHHHHHHHHCCCEEEEECCCCCCCCHHHHHCHHHHHEEEEECCCCCCCHHHHCCCCHHH
LREVPRGLPVTGLIGILVYELHRKKQNAPI
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYIALYSPSSIQKLVDFIKTVYAIKGLVPVVIKPIGAAAQIGVPEAHKIAIKQGKPFIVL
CEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCCCCCEEEEECCCCEEEE
PEISDLSNVLGCNRILYINESGREVPLAEVLDLEERVAILVSSGEQEPSRKEVENTDSVW
CCHHHHHHHHCCCEEEEECCCCCCCCHHHHHCHHHHHEEEEECCCCCCCHHHHCCCCHHH
LREVPRGLPVTGLIGILVYELHRKKQNAPI
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]