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The map label for this gene is 218884560

Identifier: 218884560

GI number: 218884560

Start: 1171143

End: 1171445

Strand: Reverse

Name: 218884560

Synonym: DKAM_1249

Alternate gene names: NA

Gene position: 1171445-1171143 (Counterclockwise)

Preceding gene: 218884564

Following gene: 218884559

Centisome position: 85.81

GC content: 45.87

Gene sequence:

>303_bases
ATGGTGGAGGAAGTGGTTAAGCTCTGCCCTAGATGTGGAAGCCCATTAATACCTGTTAAGAAAGATGGGGAGACTGTTCT
AAAGTGCAATAAATGCGGCTACGAGGTTAGGATGGATAAGAGGAGAGAGAAGTACAGTGTTAAATACCAAGTAGACGCCA
GCAAAAGGGTTGTAACGGCACAGGCAACTGAGACCAAGGAAACAAAGCTTTCACCGGAGGAAAGAGAGATTCTTAGCGAG
TACTATGAGGTCCTTTTAGAGGAGTTAGAGCGGGAAGAAGGTAGCTCAGAGGAGTCTGATTAG

Upstream 100 bases:

>100_bases
AATATGTACCCACAGTCATCACTTCTTCTCGGCACTGTTTTCCGTAGAAACCAAATCTTTATAACCTGGTTTAACTAGCA
TTAGTTAAGACGTATAGGGA

Downstream 100 bases:

>100_bases
TTAAGCTCAGCCATTCTTTTCCTCATCATAGATTCCTCAGAGCCGTCACCAGTCATCATGCTGTGGAAGCCGCTCTACCG
AGATAAAAATACGTAACTAT

Product: DNA-directed RNA polymerase, M/15 kDa subunit

Products: NA

Alternate protein names: DNA-Directed RNA Polymerase M/15 KDa Subunit

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MVEEVVKLCPRCGSPLIPVKKDGETVLKCNKCGYEVRMDKRREKYSVKYQVDASKRVVTAQATETKETKLSPEEREILSE
YYEVLLEELEREEGSSEESD

Sequences:

>Translated_100_residues
MVEEVVKLCPRCGSPLIPVKKDGETVLKCNKCGYEVRMDKRREKYSVKYQVDASKRVVTAQATETKETKLSPEEREILSE
YYEVLLEELEREEGSSEESD
>Mature_100_residues
MVEEVVKLCPRCGSPLIPVKKDGETVLKCNKCGYEVRMDKRREKYSVKYQVDASKRVVTAQATETKETKLSPEEREILSE
YYEVLLEELEREEGSSEESD

Specific function: Unknown

COG id: COG1594

COG function: function code K; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11550; Mature: 11550

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEEVVKLCPRCGSPLIPVKKDGETVLKCNKCGYEVRMDKRREKYSVKYQVDASKRVVTA
CHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCEEEEE
QATETKETKLSPEEREILSEYYEVLLEELEREEGSSEESD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVEEVVKLCPRCGSPLIPVKKDGETVLKCNKCGYEVRMDKRREKYSVKYQVDASKRVVTA
CHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCEEEEE
QATETKETKLSPEEREILSEYYEVLLEELEREEGSSEESD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA