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The map label for this gene is 218884556

Identifier: 218884556

GI number: 218884556

Start: 1166126

End: 1166770

Strand: Reverse

Name: 218884556

Synonym: DKAM_1245

Alternate gene names: NA

Gene position: 1166770-1166126 (Counterclockwise)

Preceding gene: 218884557

Following gene: 218884555

Centisome position: 85.46

GC content: 52.4

Gene sequence:

>645_bases
ATGTTGGAGAGGTTGTTGAAGCCTAGGGAGTTCTGCGAGATTGTTGGGATTAGCTACAGAACTTTTAAGCGGTGGGTCTC
TCAAGGCAGAGTGAGCGTCGTGCGAACGCCTAGTGGCAGGATAAGAGTACCGTACTCCGAGGTAGAGCGCATCCTTGGAG
GGAGGCCGGAAGCCAGAGAAGTGAGGGCTGTAGTATATGCCCGCGTGAGCTCCAGCGACCAGAAGAGCGACCTCGAGAGG
CAAGTGCAGTACCTTACACAGTACTGCACGGCAAAAGGCTACAGAGTAGTCGACGTCTTAAGTGATGTTGCTAGCGGGCT
GAAGGCAGACCGCAGAGGACTACTCAAGCTCTTCAACTACGTAGTTAGCAGGCAGGTAGACGTCGTGGTTATTACATACA
GGGACAGGCTGACTAGGTTCGGCTTCGAGTACCTAGAATACTTCTTCAGGCAGTACGGCGTTAGGATAGAGGTTGTCCTC
GGCGAGGAGCCTAAGGACGCTCACCGAGAGCTTGTGGAGGATCTACTATCGATAGTCACCTCATTTGCTGGCAAGCTCTA
CGGGCTTAGAAGCCACAAGAAAAAGAGGTTTCTCGAGGAATTCAAGAAGCTCCTAGAAGAGGTTGAGAAAGACGGGAGTA
GCTAG

Upstream 100 bases:

>100_bases
TACCCTGAAGGATTGGGATTCCTGTTGTAATAGTGAGGGAGGCTGGGGCAGAAACGTTTATTAAGGTCATTGAGGAAATT
TTATAGACAGTTGAGGTCGA

Downstream 100 bases:

>100_bases
AACCATTGTAGTCGAGACGCCGCCCATTCCAAGGAGGCTGTTCAGGGTCTTCGCCGAGCTAGAGGGCGTGTACCGGAACA
TGGTCGAGCAACTAGTGTTA

Product: IS element ISDka1 orfA resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLERLLKPREFCEIVGISYRTFKRWVSQGRVSVVRTPSGRIRVPYSEVERILGGRPEAREVRAVVYARVSSSDQKSDLER
QVQYLTQYCTAKGYRVVDVLSDVASGLKADRRGLLKLFNYVVSRQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVVL
GEEPKDAHRELVEDLLSIVTSFAGKLYGLRSHKKKRFLEEFKKLLEEVEKDGSS

Sequences:

>Translated_214_residues
MLERLLKPREFCEIVGISYRTFKRWVSQGRVSVVRTPSGRIRVPYSEVERILGGRPEAREVRAVVYARVSSSDQKSDLER
QVQYLTQYCTAKGYRVVDVLSDVASGLKADRRGLLKLFNYVVSRQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVVL
GEEPKDAHRELVEDLLSIVTSFAGKLYGLRSHKKKRFLEEFKKLLEEVEKDGSS
>Mature_214_residues
MLERLLKPREFCEIVGISYRTFKRWVSQGRVSVVRTPSGRIRVPYSEVERILGGRPEAREVRAVVYARVSSSDQKSDLER
QVQYLTQYCTAKGYRVVDVLSDVASGLKADRRGLLKLFNYVVSRQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVVL
GEEPKDAHRELVEDLLSIVTSFAGKLYGLRSHKKKRFLEEFKKLLEEVEKDGSS

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 24944; Mature: 24944

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERLLKPREFCEIVGISYRTFKRWVSQGRVSVVRTPSGRIRVPYSEVERILGGRPEARE
CCHHHCCHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHCCCCCHHH
VRAVVYARVSSSDQKSDLERQVQYLTQYCTAKGYRVVDVLSDVASGLKADRRGLLKLFNY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSRQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVVLGEEPKDAHRELVEDLLSIVT
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHH
SFAGKLYGLRSHKKKRFLEEFKKLLEEVEKDGSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLERLLKPREFCEIVGISYRTFKRWVSQGRVSVVRTPSGRIRVPYSEVERILGGRPEARE
CCHHHCCHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHCCCCCHHH
VRAVVYARVSSSDQKSDLERQVQYLTQYCTAKGYRVVDVLSDVASGLKADRRGLLKLFNY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSRQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVVLGEEPKDAHRELVEDLLSIVT
HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHH
SFAGKLYGLRSHKKKRFLEEFKKLLEEVEKDGSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]