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The map label for this gene is rpl30p

Identifier: 218884465

GI number: 218884465

Start: 1083141

End: 1083629

Strand: Reverse

Name: rpl30p

Synonym: DKAM_1154

Alternate gene names: 218884465

Gene position: 1083629-1083141 (Counterclockwise)

Preceding gene: 218884466

Following gene: 218884464

Centisome position: 79.37

GC content: 44.17

Gene sequence:

>489_bases
ATGGTTAAGCTTTACGCTATCTTAAGAATAAGGGGGCAGTCCGATACACCGCCTGACGTCGAGTACACGCTGAAACTCCT
AAGGCTCCATAAGAAATACCACCTAGTAATATATCCAGCAGAACAACCAGGTCTTGAAGGAATGCTTGAAAAAGTGAAGG
ACTGGGTTACATGGGGTGAGATAAATAAGCCCACGCTAGTGAAACTGTTCAAGGCTCGTGGAAGAGCCTCCGGCGGCATA
AGGATAACAGATGAATATATTGCCAAAGTCTTCGCGGAGCAAGGCATTAAAGATATTGAAGGATTCGCGGAGGCATTATT
GGAGGGTAAATTAGTGCTCCACAAGCTTGAAAACATTGTAAAACCGGTTTTCAGGCTGCATCCGCCGCGTGGAGGATTCG
ATGGATCCAGTAAAAAACCCTTCAATATGAAGGGTGAGCTTGGATACCGTGGTGAAAAAATAAATGAATTAATTGAGAGA
ATGCTATGA

Upstream 100 bases:

>100_bases
GGACGACGCTTAATTTCGCCAAGGCCGTTGTCAACGCATTATATAACACATATAAATTCGTTACACCGGTTGACTGGCTA
AAGGCCTGAGGTGGTGCTGG

Downstream 100 bases:

>100_bases
GGTGATAGATTATGGTCGTTAGAAAAGGTAAGAAATCCAGGAAACTCCAGGGTCGCACGAGAACAATGGGTTGGGGTAGG
GTTGGGCAGCATAGGAAAAG

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVKLYAILRIRGQSDTPPDVEYTLKLLRLHKKYHLVIYPAEQPGLEGMLEKVKDWVTWGEINKPTLVKLFKARGRASGGI
RITDEYIAKVFAEQGIKDIEGFAEALLEGKLVLHKLENIVKPVFRLHPPRGGFDGSSKKPFNMKGELGYRGEKINELIER
ML

Sequences:

>Translated_162_residues
MVKLYAILRIRGQSDTPPDVEYTLKLLRLHKKYHLVIYPAEQPGLEGMLEKVKDWVTWGEINKPTLVKLFKARGRASGGI
RITDEYIAKVFAEQGIKDIEGFAEALLEGKLVLHKLENIVKPVFRLHPPRGGFDGSSKKPFNMKGELGYRGEKINELIER
ML
>Mature_162_residues
MVKLYAILRIRGQSDTPPDVEYTLKLLRLHKKYHLVIYPAEQPGLEGMLEKVKDWVTWGEINKPTLVKLFKARGRASGGI
RITDEYIAKVFAEQGIKDIEGFAEALLEGKLVLHKLENIVKPVFRLHPPRGGFDGSSKKPFNMKGELGYRGEKINELIER
ML

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_DESK1 (B8D5U9)

Other databases:

- EMBL:   CP001140
- RefSeq:   YP_002428847.1
- GeneID:   7171243
- GenomeReviews:   CP001140_GR
- KEGG:   dka:DKAM_1154
- HOGENOM:   HBG297538
- OMA:   DYITWGE
- ProtClustDB:   PRK06049
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR016082
- Gene3D:   G3DSA:1.10.15.30
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 18485; Mature: 18485

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLYAILRIRGQSDTPPDVEYTLKLLRLHKKYHLVIYPAEQPGLEGMLEKVKDWVTWGE
CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCC
INKPTLVKLFKARGRASGGIRITDEYIAKVFAEQGIKDIEGFAEALLEGKLVLHKLENIV
CCCHHHHHHHHHCCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KPVFRLHPPRGGFDGSSKKPFNMKGELGYRGEKINELIERML
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MVKLYAILRIRGQSDTPPDVEYTLKLLRLHKKYHLVIYPAEQPGLEGMLEKVKDWVTWGE
CEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCC
INKPTLVKLFKARGRASGGIRITDEYIAKVFAEQGIKDIEGFAEALLEGKLVLHKLENIV
CCCHHHHHHHHHCCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KPVFRLHPPRGGFDGSSKKPFNMKGELGYRGEKINELIERML
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA