Click here to switch to the map view.

The map label for this gene is cmk

Identifier: 218884460

GI number: 218884460

Start: 1079448

End: 1080005

Strand: Reverse

Name: cmk

Synonym: DKAM_1149

Alternate gene names: 218884460

Gene position: 1080005-1079448 (Counterclockwise)

Preceding gene: 218884461

Following gene: 218884459

Centisome position: 79.11

GC content: 44.27

Gene sequence:

>558_bases
TTGGTTAAGATAGTTTTTAGCGGGCCGCCTGGTAGTGGTAAGACGACCCAGGCTAAACGCGTTGCCGAATACTATGGGTT
GAAATACTTCTCGGCTGGCTCATTGTTCAGGGAGTATGCTAGGAGAAAAGGGGTAAGCCTGGAGGAGTTGAGTAGGATAG
CGTTAGAGGATCCCTCTATAGACCTCGAGATAGATAGGATGACCCTTGAAACAGTTAGGGACAGTGATGACATCGTTATC
GATGGGCATCTAGCAGCCTGGATAGTATCTGACATCGTTGACTTAAAGATATATGTTACAGCTCCCCTCACGCTCAGGAT
ACTCCGTGTAGCCGGCCGTGACAACACTCCCCTGGGTAAAGCGTTGGCTGAGACCCTTATAAGGGAGTATTCTCAGAGAA
GAAGGTTTATGGAATACTACGGGATAGACATATATGATACCTCGATATTCGATTTAACTATAAACACAAAGCTAATCGGG
GTCGAGGAGGCGTTTAACATTATTAAGTCTATAATAGATAAGATTTTAAAAGAGAAACATGGTAGTATGAGTGAATAG

Upstream 100 bases:

>100_bases
CCCTATGGAGGCTATATATGTCACGAGTGTCTTGCAAGGGGTATAAGGGAGGCTGTGAGGCAAGCACTCTAACCCCTGTT
CCCTCTAGCGGTGTCTTAAA

Downstream 100 bases:

>100_bases
TGTTTAAAGGAGTAGAGGGGTGTTTAAAATGCCCGCGATAGAAATAGGTAGGATATGTGTTAAAACAGCAGGTAGGGAAG
CAGGCAGGAAATGCATTATA

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MVKIVFSGPPGSGKTTQAKRVAEYYGLKYFSAGSLFREYARRKGVSLEELSRIALEDPSIDLEIDRMTLETVRDSDDIVI
DGHLAAWIVSDIVDLKIYVTAPLTLRILRVAGRDNTPLGKALAETLIREYSQRRRFMEYYGIDIYDTSIFDLTINTKLIG
VEEAFNIIKSIIDKILKEKHGSMSE

Sequences:

>Translated_185_residues
MVKIVFSGPPGSGKTTQAKRVAEYYGLKYFSAGSLFREYARRKGVSLEELSRIALEDPSIDLEIDRMTLETVRDSDDIVI
DGHLAAWIVSDIVDLKIYVTAPLTLRILRVAGRDNTPLGKALAETLIREYSQRRRFMEYYGIDIYDTSIFDLTINTKLIG
VEEAFNIIKSIIDKILKEKHGSMSE
>Mature_185_residues
MVKIVFSGPPGSGKTTQAKRVAEYYGLKYFSAGSLFREYARRKGVSLEELSRIALEDPSIDLEIDRMTLETVRDSDDIVI
DGHLAAWIVSDIVDLKIYVTAPLTLRILRVAGRDNTPLGKALAETLIREYSQRRRFMEYYGIDIYDTSIFDLTINTKLIG
VEEAFNIIKSIIDKILKEKHGSMSE

Specific function: Unknown

COG id: COG1102

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 2 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_DESK1 (B8D5U4)

Other databases:

- EMBL:   CP001140
- RefSeq:   YP_002428842.1
- ProteinModelPortal:   B8D5U4
- GeneID:   7171240
- GenomeReviews:   CP001140_GR
- KEGG:   dka:DKAM_1149
- HOGENOM:   HBG578180
- OMA:   SGCGNTT
- ProtClustDB:   PRK04182
- GO:   GO:0005737
- HAMAP:   MF_00239
- InterPro:   IPR000850
- InterPro:   IPR011892
- PANTHER:   PTHR23359
- TIGRFAMs:   TIGR02173

Pfam domain/function: PF00406 ADK

EC number: =2.7.4.14

Molecular weight: Translated: 20955; Mature: 20955

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIVFSGPPGSGKTTQAKRVAEYYGLKYFSAGSLFREYARRKGVSLEELSRIALEDPSI
CEEEEEECCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
DLEIDRMTLETVRDSDDIVIDGHLAAWIVSDIVDLKIYVTAPLTLRILRVAGRDNTPLGK
CEEEHHHHHHHHCCCCCEEECCHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCCCHHH
ALAETLIREYSQRRRFMEYYGIDIYDTSIFDLTINTKLIGVEEAFNIIKSIIDKILKEKH
HHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEEECCEEECHHHHHHHHHHHHHHHHHHHC
GSMSE
CCCCC
>Mature Secondary Structure
MVKIVFSGPPGSGKTTQAKRVAEYYGLKYFSAGSLFREYARRKGVSLEELSRIALEDPSI
CEEEEEECCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
DLEIDRMTLETVRDSDDIVIDGHLAAWIVSDIVDLKIYVTAPLTLRILRVAGRDNTPLGK
CEEEHHHHHHHHCCCCCEEECCHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCCCHHH
ALAETLIREYSQRRRFMEYYGIDIYDTSIFDLTINTKLIGVEEAFNIIKSIIDKILKEKH
HHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEEECCEEECHHHHHHHHHHHHHHHHHHHC
GSMSE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA