Click here to switch to the map view.

The map label for this gene is rpl31e

Identifier: 218884422

GI number: 218884422

Start: 1049004

End: 1049282

Strand: Reverse

Name: rpl31e

Synonym: DKAM_1111

Alternate gene names: 218884422

Gene position: 1049282-1049004 (Counterclockwise)

Preceding gene: 218884423

Following gene: 218884421

Centisome position: 76.86

GC content: 40.5

Gene sequence:

>279_bases
ATGAGCGAATCCGGGGGTATGGTTAAATCTGTGCATGTAATACCATTGAAGAGGGTATACTTTGGACGCCGCATGAACAG
GGCTGATAGAGCTATTAGATTGGTGAGAAAATATGTTGCCAGGCACTTTAAGGATGCTGAAAAAATAATATTAGATCCAG
AGTTAAATAAGTATATATGGTCGTGTGGACGCGAGAAACCCCCTAGAAGAGTAGTTGTTGAAATAAGGTTCAATAAGAAT
GAGAAGGAGGCCAGGGTTTTTCTCAAGAGAGTTAAGTAG

Upstream 100 bases:

>100_bases
ATCTGGGTGTCGGCTAAGACCCGTCTAAGGGTTAGGAGGGGGTTCAGCCTCAGGAACTGGAGAAGGAGTAAGCTTAAGAA
TATTTAGGGGTGGTTGAGCT

Downstream 100 bases:

>100_bases
CTTGAATACTTAAAGAACTATTTAATCCTCTAGCTATAAATATATTTCTCAGTGTTTCAGGAAGGGTCGGTGGTTTTAAT
TGGAGATTACCAGGATGAGT

Product: 50S ribosomal protein L31e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MSESGGMVKSVHVIPLKRVYFGRRMNRADRAIRLVRKYVARHFKDAEKIILDPELNKYIWSCGREKPPRRVVVEIRFNKN
EKEARVFLKRVK

Sequences:

>Translated_92_residues
MSESGGMVKSVHVIPLKRVYFGRRMNRADRAIRLVRKYVARHFKDAEKIILDPELNKYIWSCGREKPPRRVVVEIRFNKN
EKEARVFLKRVK
>Mature_91_residues
SESGGMVKSVHVIPLKRVYFGRRMNRADRAIRLVRKYVARHFKDAEKIILDPELNKYIWSCGREKPPRRVVVEIRFNKNE
KEARVFLKRVK

Specific function: Unknown

COG id: COG2097

COG function: function code J; Ribosomal protein L31E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31_DESK1 (B8D5Q6)

Other databases:

- EMBL:   CP001140
- RefSeq:   YP_002428804.1
- GeneID:   7171207
- GenomeReviews:   CP001140_GR
- KEGG:   dka:DKAM_1111
- HOGENOM:   HBG553310
- OMA:   REKPPAR
- ProtClustDB:   PRK01192
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00410
- InterPro:   IPR000054
- Gene3D:   G3DSA:3.10.440.10
- PANTHER:   PTHR10956
- ProDom:   PD006030

Pfam domain/function: PF01198 Ribosomal_L31e; SSF54575 Ribosomal_L31e

EC number: NA

Molecular weight: Translated: 11011; Mature: 10880

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: PS01144 RIBOSOMAL_L31E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESGGMVKSVHVIPLKRVYFGRRMNRADRAIRLVRKYVARHFKDAEKIILDPELNKYIW
CCCCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHH
SCGREKPPRRVVVEIRFNKNEKEARVFLKRVK
HCCCCCCCCEEEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
SESGGMVKSVHVIPLKRVYFGRRMNRADRAIRLVRKYVARHFKDAEKIILDPELNKYIW
CCCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHH
SCGREKPPRRVVVEIRFNKNEKEARVFLKRVK
HCCCCCCCCEEEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA