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The map label for this gene is 218884375

Identifier: 218884375

GI number: 218884375

Start: 1008845

End: 1009363

Strand: Reverse

Name: 218884375

Synonym: DKAM_1064

Alternate gene names: NA

Gene position: 1009363-1008845 (Counterclockwise)

Preceding gene: 218884376

Following gene: 218884373

Centisome position: 73.93

GC content: 44.51

Gene sequence:

>519_bases
TTGTCTACTAGCATAATACACGTAGTTCTAGATACGGGTGGATTACTTGCTAAATACTATAGACTTTTACCACGGCACGT
ATTCAAAACCTATACTACTGAGTCAGCTGTCAACGAGGTTATCGATAGCGAAAACAGAAACGCGTTAACCGACGCTATTG
AAACCGGCTTAATCGAGGTGCTCGAACCAGGAGATTCATTTTATCTAAGGGTTGTAGAGGAGGCTAGAAGAATAGGTGAG
ATAACCAAGCTTTCGAAAACCGATCTCGAGGTAGCAGCCCTAGCCCTAATGCTTAATGAGCGGGGTAAAGTAGTTGTTGT
GACGGATGACTATAGCCTCCAGAACCTCTTACTACATCTTGGGATATCATTCAAGCCCTTAAAAACCAGTGGTATTAAAA
CCAGCAGGGAGTACAGCGAGTACTGTCCTACATGCGGATACATCCCGGCTCATCCAGGAGAAATAAATTGCCCTATATGT
GGGACTCCACTGGTTAGGAGGAAGAGGAAGGCCTCTTAA

Upstream 100 bases:

>100_bases
GGAGAAACTGTGAGAATCACAGGTAGTACAAGCTATCTTAAATTAATCAGGTTCAGCACCGTGTATGAGCGGATAAGAAC
CGTGTTGAGTAGGAGGAGAA

Downstream 100 bases:

>100_bases
GCACAGCTATAAAGTGACCTGGCATATCCATGTTTAATGGAGTATATCTGTATCCGATCATGCCTTTATATGTTGTCTTA
TCAGTGTAAGGCGGGTTCTC

Product: Nucleotide binding protein, PINc

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSTSIIHVVLDTGGLLAKYYRLLPRHVFKTYTTESAVNEVIDSENRNALTDAIETGLIEVLEPGDSFYLRVVEEARRIGE
ITKLSKTDLEVAALALMLNERGKVVVVTDDYSLQNLLLHLGISFKPLKTSGIKTSREYSEYCPTCGYIPAHPGEINCPIC
GTPLVRRKRKAS

Sequences:

>Translated_172_residues
MSTSIIHVVLDTGGLLAKYYRLLPRHVFKTYTTESAVNEVIDSENRNALTDAIETGLIEVLEPGDSFYLRVVEEARRIGE
ITKLSKTDLEVAALALMLNERGKVVVVTDDYSLQNLLLHLGISFKPLKTSGIKTSREYSEYCPTCGYIPAHPGEINCPIC
GTPLVRRKRKAS
>Mature_171_residues
STSIIHVVLDTGGLLAKYYRLLPRHVFKTYTTESAVNEVIDSENRNALTDAIETGLIEVLEPGDSFYLRVVEEARRIGEI
TKLSKTDLEVAALALMLNERGKVVVVTDDYSLQNLLLHLGISFKPLKTSGIKTSREYSEYCPTCGYIPAHPGEINCPICG
TPLVRRKRKAS

Specific function: Unknown

COG id: COG1439

COG function: function code R; Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0129 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006596
- InterPro:   IPR022907 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19112; Mature: 18981

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSIIHVVLDTGGLLAKYYRLLPRHVFKTYTTESAVNEVIDSENRNALTDAIETGLIEV
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEE
LEPGDSFYLRVVEEARRIGEITKLSKTDLEVAALALMLNERGKVVVVTDDYSLQNLLLHL
ECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
GISFKPLKTSGIKTSREYSEYCPTCGYIPAHPGEINCPICGTPLVRRKRKAS
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
STSIIHVVLDTGGLLAKYYRLLPRHVFKTYTTESAVNEVIDSENRNALTDAIETGLIEV
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEE
LEPGDSFYLRVVEEARRIGEITKLSKTDLEVAALALMLNERGKVVVVTDDYSLQNLLLHL
ECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
GISFKPLKTSGIKTSREYSEYCPTCGYIPAHPGEINCPICGTPLVRRKRKAS
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]