Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884373

Identifier: 218884373

GI number: 218884373

Start: 1007298

End: 1007624

Strand: Reverse

Name: 218884373

Synonym: DKAM_1062

Alternate gene names: NA

Gene position: 1007624-1007298 (Counterclockwise)

Preceding gene: 218884375

Following gene: 218884372

Centisome position: 73.81

GC content: 42.81

Gene sequence:

>327_bases
GTGGGGAAAATGGTTTCAACGAAAATATCTGATAAGGAGCTCGACGAGGCATTGATGGAGAAGCAGGAGAAGAAGCCTAC
AGACGAGAAACAGAGATGGGTTAACAGGATATTAAGAAGTGCTAGACAGTATCATAAGATATGCCCCTACTACGATAAAA
GAACAAAGATGTGCTTCCTACTCATGGGTACTAAGTGTGAAAGGGATGGAAAATTCGATGTATGCCCAGTCTTCAAGTCG
TTCCTCGAGAAGAAATACGATGAATACAAGTCGAAGAATATGCCGCTACCACTAGACTTCGCTGACGTGGTTGCATCACC
GTTTTAA

Upstream 100 bases:

>100_bases
CACCCTCCACGACACCTATTACAACCCATCCCTGTATCCTAGATTAGTGGATCTATATATAGTCAAACTTATTAGAGATT
AACCATATATCTACAAGAGG

Downstream 100 bases:

>100_bases
AGGTGTGTTGTAATGAGTGCCAGGAGGTATTACGTGGAGAACCCGGAGAAAATAATGATGGAGTATGATCCACAGGGCGA
CATATTGTATATAGATTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MGKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFLLMGTKCERDGKFDVCPVFKS
FLEKKYDEYKSKNMPLPLDFADVVASPF

Sequences:

>Translated_108_residues
MGKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFLLMGTKCERDGKFDVCPVFKS
FLEKKYDEYKSKNMPLPLDFADVVASPF
>Mature_107_residues
GKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFLLMGTKCERDGKFDVCPVFKSF
LEKKYDEYKSKNMPLPLDFADVVASPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12842; Mature: 12711

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LMGTKCERDGKFDVCPVFKSFLEKKYDEYKSKNMPLPLDFADVVASPF
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
GKMVSTKISDKELDEALMEKQEKKPTDEKQRWVNRILRSARQYHKICPYYDKRTKMCFL
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LMGTKCERDGKFDVCPVFKSFLEKKYDEYKSKNMPLPLDFADVVASPF
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA