The gene/protein map for NC_011766 is currently unavailable.
Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is yedJ [C]

Identifier: 218884368

GI number: 218884368

Start: 1004565

End: 1005191

Strand: Reverse

Name: yedJ [C]

Synonym: DKAM_1057

Alternate gene names: 218884368

Gene position: 1005191-1004565 (Counterclockwise)

Preceding gene: 218884369

Following gene: 218884367

Centisome position: 73.63

GC content: 43.06

Gene sequence:

>627_bases
ATGAGTAGTAAGGGTTTACAGGATGTGGTGAACATTCTTGAGAAGATATGTAGGGTATTATATGATGACTCCCTGGATCA
TGGATGGCCACATATTGAAAGAGTATTGGGCTACTCGCTAAGAATCATGAGGGAAGGAGGTGTAAAGATCAGCGAGGATC
TCCTCAAAATCGCTGTATACCTCCATGACATCGGGAGGATGATAGGTGACCCTCACGCGTATTATTCTGCATTAATAGCT
GAAGAGCTATTAGGCGAGCTGGGTTTACCAAGAGATAAGATAGAGACCATTATTGACGCGATAAAAGCACACTCCTATAG
CTATAATAAGGCGGGCGAGTACGGTGAATCACAGCTCTCAATAGTTTTAAGTGATGCTGATAAACTGGATGCACTAGGCA
TTATTGGCTTTATAAGAGTATTCCTCTATGGTCAAAGGCATGGTAGGAGCCTTGGGGAATCGATTAACCATTTCCATGAT
AAAATATTAGGACTTGAGAAGTACATCAGGCTGGAATACTCTAAGAGGCTTGCTAAGTGTTTGAGTGAGAGGACAAGGAA
GCTGTTATGCATGCTCATCGAGGAGCTAGGGCAGGAGTGCAGGGAGGAAGCATGTAGTACTATTTAA

Upstream 100 bases:

>100_bases
TAGATTGATCAAAGAGAGATATGGTGTTGAAATACCCGTCGATACTCTACAAGAGATATCTCTATGTGTTAAGAGTTAAT
GCGTTAAATGGTGATCATGG

Downstream 100 bases:

>100_bases
CCAGGTGAATCACAGTGATTAATATCACCTGTAACAATTATAGTTGAAAGGGGCTGTGTATGAGCCTAGAAGTCGCGAAA
ATACTCGTGTATGGTGCATT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: Metal-Dependent Phosphohydrolase HD Superfamily; Metal-Dependent Phosphohydrolase; HD Superfamily Hydrolase; HD Superfamily Metal-Dependent Phosphohydrolase

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSSKGLQDVVNILEKICRVLYDDSLDHGWPHIERVLGYSLRIMREGGVKISEDLLKIAVYLHDIGRMIGDPHAYYSALIA
EELLGELGLPRDKIETIIDAIKAHSYSYNKAGEYGESQLSIVLSDADKLDALGIIGFIRVFLYGQRHGRSLGESINHFHD
KILGLEKYIRLEYSKRLAKCLSERTRKLLCMLIEELGQECREEACSTI

Sequences:

>Translated_208_residues
MSSKGLQDVVNILEKICRVLYDDSLDHGWPHIERVLGYSLRIMREGGVKISEDLLKIAVYLHDIGRMIGDPHAYYSALIA
EELLGELGLPRDKIETIIDAIKAHSYSYNKAGEYGESQLSIVLSDADKLDALGIIGFIRVFLYGQRHGRSLGESINHFHD
KILGLEKYIRLEYSKRLAKCLSERTRKLLCMLIEELGQECREEACSTI
>Mature_207_residues
SSKGLQDVVNILEKICRVLYDDSLDHGWPHIERVLGYSLRIMREGGVKISEDLLKIAVYLHDIGRMIGDPHAYYSALIAE
ELLGELGLPRDKIETIIDAIKAHSYSYNKAGEYGESQLSIVLSDADKLDALGIIGFIRVFLYGQRHGRSLGESINHFHDK
ILGLEKYIRLEYSKRLAKCLSERTRKLLCMLIEELGQECREEACSTI

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23597; Mature: 23465

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKGLQDVVNILEKICRVLYDDSLDHGWPHIERVLGYSLRIMREGGVKISEDLLKIAVY
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LHDIGRMIGDPHAYYSALIAEELLGELGLPRDKIETIIDAIKAHSYSYNKAGEYGESQLS
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
IVLSDADKLDALGIIGFIRVFLYGQRHGRSLGESINHFHDKILGLEKYIRLEYSKRLAKC
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSERTRKLLCMLIEELGQECREEACSTI
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSKGLQDVVNILEKICRVLYDDSLDHGWPHIERVLGYSLRIMREGGVKISEDLLKIAVY
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LHDIGRMIGDPHAYYSALIAEELLGELGLPRDKIETIIDAIKAHSYSYNKAGEYGESQLS
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
IVLSDADKLDALGIIGFIRVFLYGQRHGRSLGESINHFHDKILGLEKYIRLEYSKRLAKC
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSERTRKLLCMLIEELGQECREEACSTI
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA