| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884363
Identifier: 218884363
GI number: 218884363
Start: 998820
End: 999191
Strand: Direct
Name: 218884363
Synonym: DKAM_1052
Alternate gene names: NA
Gene position: 998820-999191 (Clockwise)
Preceding gene: 218884362
Following gene: 218884364
Centisome position: 73.16
GC content: 38.71
Gene sequence:
>372_bases TTGAGTAAACCAGGTATTGTTTCAGAATACTATTTCAGCGATCATTATAGAGTCATAGTCGTCGAGGAGGGCGACTCCTA TATAGTATCAGTTGATGTATATAGGAGTAAATGGATTTTCACGGATTACACAGAAAAATGCGTGGAAAACACATGTCTAC TCCTAAAAGAATTATCACCAGAACCCGGTGATAATCGATACGTGGATCTAGATAGTGTATCAAAGATAATAATCATAGGT GTTAAAGTAGACGATAACTATGAAACAATAAATGTTAAATGGGTGCTCAGAAAAAAGCCGACATACAGTGATATAGAGTC GCTATACGAGGCCTCCTGGCGTATAATAGGGTGCCACCGCGGAGATTGTTAG
Upstream 100 bases:
>100_bases GAGATAGCTCGAAAACCTAGCGCATCAGAATTAAAGACCGCTTATGAGATAGCCGATAGCTTGGGGATAATGTATCAACA GGTATCATGAGGCGATTTCA
Downstream 100 bases:
>100_bases AGGGAATCCTAAAATATATTAAAATAAATTCTTTACTATGGAATATCCTAATTTAGTGAGGGACAGTATCATGGAACAAG CCTACGAGCCAAAAATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSKPGIVSEYYFSDHYRVIVVEEGDSYIVSVDVYRSKWIFTDYTEKCVENTCLLLKELSPEPGDNRYVDLDSVSKIIIIG VKVDDNYETINVKWVLRKKPTYSDIESLYEASWRIIGCHRGDC
Sequences:
>Translated_123_residues MSKPGIVSEYYFSDHYRVIVVEEGDSYIVSVDVYRSKWIFTDYTEKCVENTCLLLKELSPEPGDNRYVDLDSVSKIIIIG VKVDDNYETINVKWVLRKKPTYSDIESLYEASWRIIGCHRGDC >Mature_122_residues SKPGIVSEYYFSDHYRVIVVEEGDSYIVSVDVYRSKWIFTDYTEKCVENTCLLLKELSPEPGDNRYVDLDSVSKIIIIGV KVDDNYETINVKWVLRKKPTYSDIESLYEASWRIIGCHRGDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14315; Mature: 14184
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPGIVSEYYFSDHYRVIVVEEGDSYIVSVDVYRSKWIFTDYTEKCVENTCLLLKELSP CCCCCCEEEEEECCCEEEEEEECCCCEEEEEEEEECEEEEECHHHHHHHHHEEEEECCCC EPGDNRYVDLDSVSKIIIIGVKVDDNYETINVKWVLRKKPTYSDIESLYEASWRIIGCHR CCCCCEEEECCCCCEEEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHCCEEEEEEEC GDC CCC >Mature Secondary Structure SKPGIVSEYYFSDHYRVIVVEEGDSYIVSVDVYRSKWIFTDYTEKCVENTCLLLKELSP CCCCCEEEEEECCCEEEEEEECCCCEEEEEEEEECEEEEECHHHHHHHHHEEEEECCCC EPGDNRYVDLDSVSKIIIIGVKVDDNYETINVKWVLRKKPTYSDIESLYEASWRIIGCHR CCCCCEEEECCCCCEEEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHCCEEEEEEEC GDC CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA